RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 CATSPER1Q8NEC5 780 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 VPS50Q96JG6 964 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 NTPCRQ9BSD7 190 aaKnown RBP7.73□□□□□ -1.17
NEDD9-208ENST00000504387 RPF2Q9H7B2 306 aaKnown RBP7.73□□□□□ -1.17
NEDD9-208ENST00000504387 PRDM8Q9NQV8 689 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 PNPLA3Q9NST1 481 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 MOCS1Q9NZB8 636 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 GPRC5DQ9NZD1 345 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 OAZ3Q9UMX2 235 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 THSD7AQ9UPZ6 1657 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 TCAF2A6NFQ2 919 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 CFAP99D6REC4 459 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 G3V2L1 256 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 GRID2O43424 1007 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 BCAS2O75934 225 aaPredicted RBP7.73□□□□□ -1.17
NEDD9-208ENST00000504387 MATN1P21941 496 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 IREB2P48200 963 aaKnown RBP7.73□□□□□ -1.17
NEDD9-208ENST00000504387 ZNF132P52740 706 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 NDST1P52848 882 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 MLLT10P55197 1068 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 PITX1P78337 314 aaPredicted RBP7.73□□□□□ -1.17
NEDD9-208ENST00000504387 TAP1Q03518 808 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 FOXD4Q12950 439 aaPredicted RBP7.73□□□□□ -1.17
NEDD9-208ENST00000504387 CAPSQ13938 189 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 GRM3Q14832 879 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 PLA2G4EQ3MJ16 856 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 ZNF618Q5T7W0 954 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 METTL21CQ5VZV1 264 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 CYP4V2Q6ZWL3 525 aaPredicted RBP7.73□□□□□ -1.17
NEDD9-208ENST00000504387 ZBTB8OSQ8IWT0 167 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 PGAM4Q8N0Y7 254 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 SLCO4A1Q96BD0 722 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 ANKRD36BP1Q96IX9 119 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 TSNARE1Q96NA8 513 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 CNPY3Q9BT09 278 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 STN1Q9H668 368 aaKnown RBP7.73□□□□□ -1.17
NEDD9-208ENST00000504387 FANCEQ9HB96 536 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 NRBP2Q9NSY0 501 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 GGA3Q9NZ52 723 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 HACL1Q9UJ83 578 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 AKT3Q9Y243 479 aa7.73□□□□□ -1.17
NEDD9-208ENST00000504387 KANSL1LA0AUZ9 987 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 EI24O14681 340 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 ACOT8O14734 319 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 INPP4BO15327 924 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 NRP2O60462 931 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 CBFA2T3O75081 653 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 LSM8O95777 96 aaKnown RBP7.72□□□□□ -1.17
NEDD9-208ENST00000504387 IL1BP01584 269 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 TCEA1P23193 301 aaKnown RBP7.72□□□□□ -1.17
NEDD9-208ENST00000504387 GLDCP23378 1020 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 GP5P40197 560 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 GARSP41250 739 aaKnown RBP7.72□□□□□ -1.17
NEDD9-208ENST00000504387 ZNF143P52747 638 aaPredicted RBP7.72□□□□□ -1.17
NEDD9-208ENST00000504387 CDH13P55290 713 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 IFRD2Q12894 506 aaPredicted RBP7.72□□□□□ -1.17
NEDD9-208ENST00000504387 TRIM25Q14258 630 aaKnown RBP7.72□□□□□ -1.17
NEDD9-208ENST00000504387 FASTKQ14296 549 aaKnown RBP7.72□□□□□ -1.17
NEDD9-208ENST00000504387 TMEM132BQ14DG7 1078 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 FAM47CQ5HY64 1035 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 SLFN12LQ6IEE8 588 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 ZFP1Q6P2D0 407 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 TICAM1Q8IUC6 712 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 RP9Q8TA86 221 aaKnown RBP7.72□□□□□ -1.17
NEDD9-208ENST00000504387 TBC1D15Q8TC07 691 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 HTR3CQ8WXA8 447 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 COPS5Q92905 334 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 NXNL1Q96CM4 212 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 FRMD8Q9BZ67 464 aaPredicted RBP7.72□□□□□ -1.17
NEDD9-208ENST00000504387 PNPLA8Q9NP80 782 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 XPR1Q9UBH6 696 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 DSEQ9UL01 958 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 HEATR9A2RTY3 570 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 KLRG2A4D1S0 409 aaPredicted RBP7.72□□□□□ -1.17
NEDD9-208ENST00000504387 KPNA7A9QM74 516 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 MATN2O00339 956 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 NR5A2O00482 541 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 TADA2AO75478 443 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 SNAP29O95721 258 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 SUPT20HL2P0C7V6 817 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 HARS2P49590 506 aaKnown RBP7.72□□□□□ -1.17
NEDD9-208ENST00000504387 BCAT1P54687 386 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 TPD52P55327 224 aaPredicted RBP7.72□□□□□ -1.17
NEDD9-208ENST00000504387 IL1RL1Q01638 556 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 CLCQ05315 142 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 SLC12A1Q13621 1099 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 KIZQ2M2Z5 673 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 RGS21Q2M5E4 152 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 GOLGA7BQ2TAP0 167 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 SUPT20HL1Q3ZLR7 823 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 CTU1Q7Z7A3 348 aaKnown RBP7.72□□□□□ -1.17
NEDD9-208ENST00000504387 DSG4Q86SJ6 1040 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 DENND6AQ8IWF6 608 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 KCTD17Q8N5Z5 321 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 NIPA2Q8N8Q9 360 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 DNAJB14Q8TBM8 379 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 CAPSLQ8WWF8 208 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 SREK1Q8WXA9 508 aaKnown RBP7.72□□□□□ -1.17
NEDD9-208ENST00000504387 ARNTL2Q8WYA1 636 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 FTHL17Q9BXU8 183 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms