RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 CCNHP51946 323 aaPredicted RBP16.77■□□□□ 0.27
SCLT1-205ENST00000503401 RHOAP61586 193 aa16.77■□□□□ 0.27
SCLT1-205ENST00000503401 SLC10A7Q0GE19 358 aa16.77■□□□□ 0.27
SCLT1-205ENST00000503401 CST6Q15828 149 aa16.77■□□□□ 0.27
SCLT1-205ENST00000503401 MAP7D1Q3KQU3 841 aa16.77■□□□□ 0.27
SCLT1-205ENST00000503401 USP39Q53GS9 565 aaKnown RBP16.77■□□□□ 0.27
SCLT1-205ENST00000503401 CARD16Q5EG05 197 aa16.77■□□□□ 0.27
SCLT1-205ENST00000503401 ZC3H14Q6PJT7 736 aaKnown RBP16.77■□□□□ 0.27
SCLT1-205ENST00000503401 FAM124AQ86V42 546 aa16.77■□□□□ 0.27
SCLT1-205ENST00000503401 TSEN2Q8NCE0 465 aaKnown RBP16.77■□□□□ 0.27
SCLT1-205ENST00000503401 GAB3Q8WWW8 586 aa16.77■□□□□ 0.27
SCLT1-205ENST00000503401 ISG20Q96AZ6 181 aaKnown RBP16.77■□□□□ 0.27
SCLT1-205ENST00000503401 LGMNQ99538 433 aa16.77■□□□□ 0.27
SCLT1-205ENST00000503401 LHX3Q9UBR4 397 aa16.77■□□□□ 0.27
SCLT1-205ENST00000503401 SERGEFQ9UGK8 458 aa16.77■□□□□ 0.27
SCLT1-205ENST00000503401 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.77■□□□□ 0.27
SCLT1-205ENST00000503401 ANKRD36A6QL64 1941 aa16.76■□□□□ 0.27
SCLT1-205ENST00000503401 ZSCAN12O43309 604 aa16.76■□□□□ 0.27
SCLT1-205ENST00000503401 DNTTP04053 509 aa16.76■□□□□ 0.27
SCLT1-205ENST00000503401 ZFXP17010 805 aaPredicted RBP16.76■□□□□ 0.27
SCLT1-205ENST00000503401 CHRNA3P32297 505 aa16.76■□□□□ 0.27
SCLT1-205ENST00000503401 SLC8A1P32418 973 aa16.76■□□□□ 0.27
SCLT1-205ENST00000503401 P2RY2P41231 377 aa16.76■□□□□ 0.27
SCLT1-205ENST00000503401 RGRP47804 291 aa16.76■□□□□ 0.27
SCLT1-205ENST00000503401 TFDP2Q14188 446 aa16.76■□□□□ 0.27
SCLT1-205ENST00000503401 PPP2R5EQ16537 467 aa16.76■□□□□ 0.27
SCLT1-205ENST00000503401 LPAL2Q16609 132 aa16.76■□□□□ 0.27
SCLT1-205ENST00000503401 ARSIQ5FYB1 569 aa16.76■□□□□ 0.27
SCLT1-205ENST00000503401 MEI1Q5TIA1 1274 aa16.76■□□□□ 0.27
SCLT1-205ENST00000503401 CCNYQ8ND76 341 aa16.76■□□□□ 0.27
SCLT1-205ENST00000503401 CASKIN2Q8WXE0 1202 aa16.76■□□□□ 0.27
SCLT1-205ENST00000503401 ZNF419Q96HQ0 510 aaPredicted RBP16.76■□□□□ 0.27
SCLT1-205ENST00000503401 CCDC114Q96M63 670 aa16.76■□□□□ 0.27
SCLT1-205ENST00000503401 OSBPL8Q9BZF1 889 aa16.76■□□□□ 0.27
SCLT1-205ENST00000503401 IRF2BPLQ9H1B7 796 aa16.76■□□□□ 0.27
SCLT1-205ENST00000503401 ZDHHC6Q9H6R6 413 aa16.76■□□□□ 0.27
SCLT1-205ENST00000503401 USP36Q9P275 1121 aaKnown RBP16.76■□□□□ 0.27
SCLT1-205ENST00000503401 MBD1Q9UIS9 605 aaPredicted RBP16.76■□□□□ 0.27
SCLT1-205ENST00000503401 PPM1HQ9ULR3 514 aa16.76■□□□□ 0.27
SCLT1-205ENST00000503401 FARP1Q9Y4F1 1045 aaPredicted RBP16.76■□□□□ 0.27
SCLT1-205ENST00000503401 IGHV1OR15-9A0A0B4J2B8 117 aa16.75■□□□□ 0.27
SCLT1-205ENST00000503401 A0A1W2PP55 124 aa16.75■□□□□ 0.27
SCLT1-205ENST00000503401 MUSKO15146 869 aa16.75■□□□□ 0.27
SCLT1-205ENST00000503401 INSIG1O15503 277 aa16.75■□□□□ 0.27
SCLT1-205ENST00000503401 LEFTY1O75610 366 aa16.75■□□□□ 0.27
SCLT1-205ENST00000503401 GJB3O75712 270 aa16.75■□□□□ 0.27
SCLT1-205ENST00000503401 COPS2P61201 443 aa16.75■□□□□ 0.27
SCLT1-205ENST00000503401 SNRPD1P62314 119 aaKnown RBP16.75■□□□□ 0.27
SCLT1-205ENST00000503401 NHLH1Q02575 133 aa16.75■□□□□ 0.27
SCLT1-205ENST00000503401 LBRQ14739 615 aaKnown RBP16.75■□□□□ 0.27
SCLT1-205ENST00000503401 TMCO4Q5TGY1 634 aa16.75■□□□□ 0.27
SCLT1-205ENST00000503401 PRR23BQ6ZRT6 265 aa16.75■□□□□ 0.27
SCLT1-205ENST00000503401 CEP68Q76N32 757 aa16.75■□□□□ 0.27
SCLT1-205ENST00000503401 METTL3Q86U44 580 aaKnown RBP16.75■□□□□ 0.27
SCLT1-205ENST00000503401 AADATQ8N5Z0 425 aa16.75■□□□□ 0.27
SCLT1-205ENST00000503401 TRIM58Q8NG06 486 aa16.75■□□□□ 0.27
SCLT1-205ENST00000503401 OR2AP1Q8NGE2 309 aa16.75■□□□□ 0.27
SCLT1-205ENST00000503401 PIP4K2CQ8TBX8 421 aa16.75■□□□□ 0.27
SCLT1-205ENST00000503401 GANCQ8TET4 914 aa16.75■□□□□ 0.27
SCLT1-205ENST00000503401 CINPQ9BW66 212 aaPredicted RBP16.75■□□□□ 0.27
SCLT1-205ENST00000503401 PABPC3Q9H361 631 aaKnown RBP16.75■□□□□ 0.27
SCLT1-205ENST00000503401 ITM2CQ9NQX7 267 aa16.75■□□□□ 0.27
SCLT1-205ENST00000503401 IL36AQ9UHA7 158 aa16.75■□□□□ 0.27
SCLT1-205ENST00000503401 EVLQ9UI08 416 aaPredicted RBP16.75■□□□□ 0.27
SCLT1-205ENST00000503401 WASF2Q9Y6W5 498 aa16.75■□□□□ 0.27
SCLT1-205ENST00000503401 GPR179Q6PRD1 2367 aa16.75■□□□□ 0.27
SCLT1-205ENST00000503401 TTC24A2A3L6 582 aaPredicted RBP16.74■□□□□ 0.27
SCLT1-205ENST00000503401 KRIT1O00522 736 aa16.74■□□□□ 0.27
SCLT1-205ENST00000503401 ZNF217O75362 1048 aa16.74■□□□□ 0.27
SCLT1-205ENST00000503401 GSRP00390 522 aa16.74■□□□□ 0.27
SCLT1-205ENST00000503401 MX2P20592 715 aa16.74■□□□□ 0.27
SCLT1-205ENST00000503401 SIM2Q14190 667 aaPredicted RBP16.74■□□□□ 0.27
SCLT1-205ENST00000503401 RPS6KA1Q15418 735 aa16.74■□□□□ 0.27
SCLT1-205ENST00000503401 DSG4Q86SJ6 1040 aa16.74■□□□□ 0.27
SCLT1-205ENST00000503401 KBTBD6Q86V97 674 aa16.74■□□□□ 0.27
SCLT1-205ENST00000503401 DEFB119Q8N690 84 aa16.74■□□□□ 0.27
SCLT1-205ENST00000503401 VOPP1Q96AW1 172 aa16.74■□□□□ 0.27
SCLT1-205ENST00000503401 HDAC11Q96DB2 347 aa16.74■□□□□ 0.27
SCLT1-205ENST00000503401 SPACA7Q96KW9 195 aa16.74■□□□□ 0.27
SCLT1-205ENST00000503401 GDAP1L1Q96MZ0 367 aa16.74■□□□□ 0.27
SCLT1-205ENST00000503401 OLFM3Q96PB7 478 aa16.74■□□□□ 0.27
SCLT1-205ENST00000503401 HEPHQ9BQS7 1158 aa16.74■□□□□ 0.27
SCLT1-205ENST00000503401 FBXL12Q9NXK8 326 aa16.74■□□□□ 0.27
SCLT1-205ENST00000503401 KPNA3O00505 521 aaPredicted RBP16.74■□□□□ 0.27
SCLT1-205ENST00000503401 ALOX15BO15296 676 aa16.74■□□□□ 0.27
SCLT1-205ENST00000503401 RNASEH2AO75792 299 aaKnown RBP16.74■□□□□ 0.27
SCLT1-205ENST00000503401 IGSF6O95976 241 aa16.74■□□□□ 0.27
SCLT1-205ENST00000503401 ADH1BP00325 375 aa16.74■□□□□ 0.27
SCLT1-205ENST00000503401 C7P10643 843 aa16.74■□□□□ 0.27
SCLT1-205ENST00000503401 TGM2P21980 687 aa16.74■□□□□ 0.27
SCLT1-205ENST00000503401 CNR2P34972 360 aa16.74■□□□□ 0.27
SCLT1-205ENST00000503401 NBL1P41271 181 aa16.74■□□□□ 0.27
SCLT1-205ENST00000503401 MAXP61244 160 aa16.74■□□□□ 0.27
SCLT1-205ENST00000503401 AP1B1Q10567 949 aa16.74■□□□□ 0.27
SCLT1-205ENST00000503401 ZNF235Q14590 738 aa16.74■□□□□ 0.27
SCLT1-205ENST00000503401 RFTN1Q14699 578 aaPredicted RBP16.74■□□□□ 0.27
SCLT1-205ENST00000503401 MYLK3Q32MK0 819 aa16.74■□□□□ 0.27
SCLT1-205ENST00000503401 TTC31Q49AM3 519 aaPredicted RBP16.74■□□□□ 0.27
SCLT1-205ENST00000503401 CCDC181Q5TID7 509 aa16.74■□□□□ 0.27
SCLT1-205ENST00000503401 BBS12Q6ZW61 710 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms