RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 ARHGEF18Q6ZSZ5 1173 aa20.73■□□□□ 0.91
CDC42SE2-206ENST00000503291 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.73■□□□□ 0.91
CDC42SE2-206ENST00000503291 PAK5Q9P286 719 aa20.73■□□□□ 0.91
CDC42SE2-206ENST00000503291 KRBA1A5PL33 1030 aa20.72■□□□□ 0.91
CDC42SE2-206ENST00000503291 ATP9BO43861 1147 aa20.72■□□□□ 0.91
CDC42SE2-206ENST00000503291 ZNF821O75541 412 aaPredicted RBP20.72■□□□□ 0.91
CDC42SE2-206ENST00000503291 RHOAP61586 193 aa20.72■□□□□ 0.91
CDC42SE2-206ENST00000503291 ITKQ08881 620 aa20.72■□□□□ 0.91
CDC42SE2-206ENST00000503291 PTK6Q13882 451 aa20.72■□□□□ 0.91
CDC42SE2-206ENST00000503291 ZNF234Q14588 700 aa20.72■□□□□ 0.91
CDC42SE2-206ENST00000503291 GLE1Q53GS7 698 aaKnown RBP20.72■□□□□ 0.91
CDC42SE2-206ENST00000503291 TAB3Q8N5C8 712 aaPredicted RBP20.72■□□□□ 0.91
CDC42SE2-206ENST00000503291 EXOC2Q96KP1 924 aa20.72■□□□□ 0.91
CDC42SE2-206ENST00000503291 ZDHHC4Q9NPG8 344 aa20.72■□□□□ 0.91
CDC42SE2-206ENST00000503291 THAP10Q9P2Z0 257 aaPredicted RBP20.72■□□□□ 0.91
CDC42SE2-206ENST00000503291 LHX3Q9UBR4 397 aa20.72■□□□□ 0.91
CDC42SE2-206ENST00000503291 EFCAB8A8MWE9 144 aa20.71■□□□□ 0.91
CDC42SE2-206ENST00000503291 TTC34A8MYJ7 566 aa20.71■□□□□ 0.91
CDC42SE2-206ENST00000503291 METTL18O95568 372 aa20.71■□□□□ 0.91
CDC42SE2-206ENST00000503291 KIR2DL1P43626 348 aaPredicted RBP20.71■□□□□ 0.91
CDC42SE2-206ENST00000503291 SEC13P55735 322 aa20.71■□□□□ 0.91
CDC42SE2-206ENST00000503291 GPS1Q13098 491 aa20.71■□□□□ 0.91
CDC42SE2-206ENST00000503291 EGFLAMQ63HQ2 1017 aa20.71■□□□□ 0.91
CDC42SE2-206ENST00000503291 KDM1BQ8NB78 822 aa20.71■□□□□ 0.91
CDC42SE2-206ENST00000503291 ISG20Q96AZ6 181 aaKnown RBP20.71■□□□□ 0.91
CDC42SE2-206ENST00000503291 HINFPQ9BQA5 517 aa20.71■□□□□ 0.91
CDC42SE2-206ENST00000503291 MGME1Q9BQP7 344 aa20.71■□□□□ 0.91
CDC42SE2-206ENST00000503291 TM6SF2Q9BZW4 377 aa20.71■□□□□ 0.91
CDC42SE2-206ENST00000503291 CEP44Q9C0F1 390 aa20.71■□□□□ 0.91
CDC42SE2-206ENST00000503291 TNKS2Q9H2K2 1166 aa20.71■□□□□ 0.91
CDC42SE2-206ENST00000503291 GLOD4Q9HC38 313 aa20.71■□□□□ 0.91
CDC42SE2-206ENST00000503291 HAUS2Q9NVX0 235 aa20.71■□□□□ 0.91
CDC42SE2-206ENST00000503291 ASIC3Q9UHC3 531 aa20.71■□□□□ 0.91
CDC42SE2-206ENST00000503291 SLC8A2Q9UPR5 921 aa20.71■□□□□ 0.91
CDC42SE2-206ENST00000503291 NFKB1P19838 968 aa20.71■□□□□ 0.91
CDC42SE2-206ENST00000503291 HSPA9P38646 679 aaKnown RBP20.71■□□□□ 0.91
CDC42SE2-206ENST00000503291 RGRP47804 291 aa20.71■□□□□ 0.91
CDC42SE2-206ENST00000503291 NSUN2Q08J23 767 aaKnown RBP eCLIP20.71■□□□□ 0.91
CDC42SE2-206ENST00000503291 FNDC3BQ53EP0 1204 aaKnown RBP20.71■□□□□ 0.91
CDC42SE2-206ENST00000503291 TEX35Q5T0J7 233 aa20.71■□□□□ 0.91
CDC42SE2-206ENST00000503291 ITPRIPL1Q6GPH6 555 aa20.71■□□□□ 0.91
CDC42SE2-206ENST00000503291 C22orf39Q6P5X5 142 aa20.71■□□□□ 0.91
CDC42SE2-206ENST00000503291 ZNF513Q8N8E2 541 aaPredicted RBP20.71■□□□□ 0.91
CDC42SE2-206ENST00000503291 CCHCR1Q8TD31 782 aa20.71■□□□□ 0.91
CDC42SE2-206ENST00000503291 FRS2Q8WU20 508 aa20.71■□□□□ 0.91
CDC42SE2-206ENST00000503291 ACOX2Q99424 681 aa20.71■□□□□ 0.91
CDC42SE2-206ENST00000503291 ERP44Q9BS26 406 aa20.71■□□□□ 0.91
CDC42SE2-206ENST00000503291 POLR1EQ9GZS1 481 aaKnown RBP20.71■□□□□ 0.91
CDC42SE2-206ENST00000503291 RSPH14Q9UHP6 348 aa20.71■□□□□ 0.91
CDC42SE2-206ENST00000503291 NDRG2Q9UN36 371 aaKnown RBP20.71■□□□□ 0.91
CDC42SE2-206ENST00000503291 TTC24A2A3L6 582 aaPredicted RBP20.7■□□□□ 0.9
CDC42SE2-206ENST00000503291 WASH3PC4AMC7 463 aa20.7■□□□□ 0.9
CDC42SE2-206ENST00000503291 F5H423 210 aaPredicted RBP20.7■□□□□ 0.9
CDC42SE2-206ENST00000503291 HNRNPLP14866 589 aaKnown RBP eCLIP20.7■□□□□ 0.9
CDC42SE2-206ENST00000503291 ADCY8P40145 1251 aa20.7■□□□□ 0.9
CDC42SE2-206ENST00000503291 PARP6Q2NL67 630 aa20.7■□□□□ 0.9
CDC42SE2-206ENST00000503291 C4orf22Q6V702 233 aa20.7■□□□□ 0.9
CDC42SE2-206ENST00000503291 SIX5Q8N196 739 aa20.7■□□□□ 0.9
CDC42SE2-206ENST00000503291 SHDQ96IW2 340 aa20.7■□□□□ 0.9
CDC42SE2-206ENST00000503291 TRIM31Q9BZY9 425 aa20.7■□□□□ 0.9
CDC42SE2-206ENST00000503291 GBA3Q9H227 469 aa20.7■□□□□ 0.9
CDC42SE2-206ENST00000503291 TMEM245Q9H330 911 aa20.7■□□□□ 0.9
CDC42SE2-206ENST00000503291 RAB6BQ9NRW1 208 aa20.7■□□□□ 0.9
CDC42SE2-206ENST00000503291 GJB3O75712 270 aa20.7■□□□□ 0.9
CDC42SE2-206ENST00000503291 RHOXF2BP0C7M4 288 aa20.7■□□□□ 0.9
CDC42SE2-206ENST00000503291 PSMB4P28070 264 aa20.7■□□□□ 0.9
CDC42SE2-206ENST00000503291 TIE1P35590 1138 aa20.7■□□□□ 0.9
CDC42SE2-206ENST00000503291 IL12RB1P42701 662 aa20.7■□□□□ 0.9
CDC42SE2-206ENST00000503291 SCNN1BP51168 640 aa20.7■□□□□ 0.9
CDC42SE2-206ENST00000503291 STARD6P59095 220 aa20.7■□□□□ 0.9
CDC42SE2-206ENST00000503291 DSC2Q02487 901 aa20.7■□□□□ 0.9
CDC42SE2-206ENST00000503291 CCINQ13939 588 aa20.7■□□□□ 0.9
CDC42SE2-206ENST00000503291 C2orf27AQ580R0 203 aa20.7■□□□□ 0.9
CDC42SE2-206ENST00000503291 ATXN7L2Q5T6C5 722 aaPredicted RBP20.7■□□□□ 0.9
CDC42SE2-206ENST00000503291 CCDC70Q6NSX1 233 aa20.7■□□□□ 0.9
CDC42SE2-206ENST00000503291 SERPINA13PQ6UXR4 307 aa20.7■□□□□ 0.9
CDC42SE2-206ENST00000503291 PCDH20Q8N6Y1 951 aaKnown RBP20.7■□□□□ 0.9
CDC42SE2-206ENST00000503291 ZNF366Q8N895 744 aa20.7■□□□□ 0.9
CDC42SE2-206ENST00000503291 ARRDC2Q8TBH0 407 aa20.7■□□□□ 0.9
CDC42SE2-206ENST00000503291 SEMA3CQ99985 751 aa20.7■□□□□ 0.9
CDC42SE2-206ENST00000503291 RHOXF2Q9BQY4 288 aa20.7■□□□□ 0.9
CDC42SE2-206ENST00000503291 SLC25A51Q9H1U9 297 aa20.7■□□□□ 0.9
CDC42SE2-206ENST00000503291 CACNA2D2Q9NY47 1150 aa20.7■□□□□ 0.9
CDC42SE2-206ENST00000503291 DMGDHQ9UI17 866 aaKnown RBP20.7■□□□□ 0.9
CDC42SE2-206ENST00000503291 UTP11Q9Y3A2 253 aaKnown RBP20.7■□□□□ 0.9
CDC42SE2-206ENST00000503291 ATG2BQ96BY7 2078 aa20.69■□□□□ 0.9
CDC42SE2-206ENST00000503291 BNIP3LO60238 219 aa20.69■□□□□ 0.9
CDC42SE2-206ENST00000503291 HEXIM1O94992 359 aaKnown RBP20.69■□□□□ 0.9
CDC42SE2-206ENST00000503291 CR2P20023 1033 aa20.69■□□□□ 0.9
CDC42SE2-206ENST00000503291 TUBB4BP68371 445 aa20.69■□□□□ 0.9
CDC42SE2-206ENST00000503291 NIPAL4Q0D2K0 466 aa20.69■□□□□ 0.9
CDC42SE2-206ENST00000503291 E2F5Q15329 346 aa20.69■□□□□ 0.9
CDC42SE2-206ENST00000503291 FAXCQ5TGI0 409 aa20.69■□□□□ 0.9
CDC42SE2-206ENST00000503291 ALG1LQ6GMV1 187 aa20.69■□□□□ 0.9
CDC42SE2-206ENST00000503291 Q6ZVU0 165 aa20.69■□□□□ 0.9
CDC42SE2-206ENST00000503291 CHPFQ8IZ52 775 aa20.69■□□□□ 0.9
CDC42SE2-206ENST00000503291 KCNV2Q8TDN2 545 aa20.69■□□□□ 0.9
CDC42SE2-206ENST00000503291 FCRL5Q96RD9 977 aa20.69■□□□□ 0.9
CDC42SE2-206ENST00000503291 RAB17Q9H0T7 212 aa20.69■□□□□ 0.9
CDC42SE2-206ENST00000503291 MTG2Q9H4K7 406 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms