RNA–Protein interactions for RNA: ENST00000502985.5

NR1I3-217, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 774 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-217ENST00000502985 ZNF419Q96HQ0 510 aaPredicted RBP10.58□□□□□ -0.72
NR1I3-217ENST00000502985 MRGPRX1Q96LB2 322 aa10.58□□□□□ -0.72
NR1I3-217ENST00000502985 CCDC114Q96M63 670 aa10.58□□□□□ -0.72
NR1I3-217ENST00000502985 GDAP1L1Q96MZ0 367 aa10.58□□□□□ -0.72
NR1I3-217ENST00000502985 WDR24Q96S15 920 aa10.58□□□□□ -0.72
NR1I3-217ENST00000502985 CEP41Q9BYV8 373 aa10.58□□□□□ -0.72
NR1I3-217ENST00000502985 CARD9Q9H257 536 aa10.58□□□□□ -0.72
NR1I3-217ENST00000502985 C10orf88Q9H8K7 445 aa10.58□□□□□ -0.72
NR1I3-217ENST00000502985 PRDM16Q9HAZ2 1276 aa10.58□□□□□ -0.72
NR1I3-217ENST00000502985 FBXO4Q9UKT5 387 aa10.58□□□□□ -0.72
NR1I3-217ENST00000502985 INVSQ9Y283 1065 aa10.58□□□□□ -0.72
NR1I3-217ENST00000502985 JRKLQ9Y4A0 524 aa10.58□□□□□ -0.72
NR1I3-217ENST00000502985 TTLL3Q9Y4R7 772 aa10.58□□□□□ -0.72
NR1I3-217ENST00000502985 WDFY4Q6ZS81 3184 aa10.58□□□□□ -0.72
NR1I3-217ENST00000502985 LRRK1Q38SD2 2015 aa10.57□□□□□ -0.72
NR1I3-217ENST00000502985 TTC24A2A3L6 582 aaPredicted RBP10.57□□□□□ -0.72
NR1I3-217ENST00000502985 H7C0C1 242 aa10.57□□□□□ -0.72
NR1I3-217ENST00000502985 RNF103O00237 685 aa10.57□□□□□ -0.72
NR1I3-217ENST00000502985 PLK4O00444 970 aa10.57□□□□□ -0.72
NR1I3-217ENST00000502985 KRIT1O00522 736 aa10.57□□□□□ -0.72
NR1I3-217ENST00000502985 MUSKO15146 869 aa10.57□□□□□ -0.72
NR1I3-217ENST00000502985 AXIN1O15169 862 aa10.57□□□□□ -0.72
NR1I3-217ENST00000502985 MID1O15344 667 aa10.57□□□□□ -0.72
NR1I3-217ENST00000502985 INSIG1O15503 277 aa10.57□□□□□ -0.72
NR1I3-217ENST00000502985 RNASEH1O60930 286 aaKnown RBP10.57□□□□□ -0.72
NR1I3-217ENST00000502985 IGSF6O95976 241 aa10.57□□□□□ -0.72
NR1I3-217ENST00000502985 GSRP00390 522 aa10.57□□□□□ -0.72
NR1I3-217ENST00000502985 CTSLP07711 333 aa10.57□□□□□ -0.72
NR1I3-217ENST00000502985 MMP13P45452 471 aa10.57□□□□□ -0.72
NR1I3-217ENST00000502985 ATP5OP48047 213 aa10.57□□□□□ -0.72
NR1I3-217ENST00000502985 NR2C2P49116 596 aa10.57□□□□□ -0.72
NR1I3-217ENST00000502985 METAP1P53582 386 aa10.57□□□□□ -0.72
NR1I3-217ENST00000502985 MAXP61244 160 aa10.57□□□□□ -0.72
NR1I3-217ENST00000502985 RPS14P62263 151 aaKnown RBP10.57□□□□□ -0.72
NR1I3-217ENST00000502985 SNRPD1P62314 119 aaKnown RBP10.57□□□□□ -0.72
NR1I3-217ENST00000502985 PPIDQ08752 370 aaKnown RBP10.57□□□□□ -0.72
NR1I3-217ENST00000502985 ZBTB17Q13105 803 aa10.57□□□□□ -0.72
NR1I3-217ENST00000502985 SRSF5Q13243 272 aaKnown RBP10.57□□□□□ -0.72
NR1I3-217ENST00000502985 PRKD1Q15139 912 aaPredicted RBP10.57□□□□□ -0.72
NR1I3-217ENST00000502985 NOMO1Q15155 1222 aa10.57□□□□□ -0.72
NR1I3-217ENST00000502985 INO80DQ53TQ3 878 aaPredicted RBP10.57□□□□□ -0.72
NR1I3-217ENST00000502985 CARD16Q5EG05 197 aa10.57□□□□□ -0.72
NR1I3-217ENST00000502985 METTL3Q86U44 580 aaKnown RBP10.57□□□□□ -0.72
NR1I3-217ENST00000502985 FAM124AQ86V42 546 aa10.57□□□□□ -0.72
NR1I3-217ENST00000502985 RASSF3Q86WH2 238 aa10.57□□□□□ -0.72
NR1I3-217ENST00000502985 SLC13A5Q86YT5 568 aaPredicted RBP10.57□□□□□ -0.72
NR1I3-217ENST00000502985 PGBD5Q8N414 524 aa10.57□□□□□ -0.72
NR1I3-217ENST00000502985 CAMKK1Q8N5S9 505 aa10.57□□□□□ -0.72
NR1I3-217ENST00000502985 OR2AP1Q8NGE2 309 aa10.57□□□□□ -0.72
NR1I3-217ENST00000502985 TFB1MQ8WVM0 346 aaKnown RBP10.57□□□□□ -0.72
NR1I3-217ENST00000502985 CASKIN2Q8WXE0 1202 aa10.57□□□□□ -0.72
NR1I3-217ENST00000502985 ATG4AQ8WYN0 398 aa10.57□□□□□ -0.72
NR1I3-217ENST00000502985 PRCCQ92733 491 aaPredicted RBP10.57□□□□□ -0.72
NR1I3-217ENST00000502985 SIPA1Q96FS4 1042 aa10.57□□□□□ -0.72
NR1I3-217ENST00000502985 ZNF599Q96NL3 588 aa10.57□□□□□ -0.72
NR1I3-217ENST00000502985 QKIQ96PU8 341 aaKnown RBP eCLIP10.57□□□□□ -0.72
NR1I3-217ENST00000502985 RSPH9Q9H1X1 276 aaPredicted RBP10.57□□□□□ -0.72
NR1I3-217ENST00000502985 FBRSQ9HAH7 460 aa10.57□□□□□ -0.72
NR1I3-217ENST00000502985 NT5MQ9NPB1 228 aa10.57□□□□□ -0.72
NR1I3-217ENST00000502985 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.57□□□□□ -0.72
NR1I3-217ENST00000502985 SEPT3Q9UH03 358 aa10.57□□□□□ -0.72
NR1I3-217ENST00000502985 IL36AQ9UHA7 158 aa10.57□□□□□ -0.72
NR1I3-217ENST00000502985 EVLQ9UI08 416 aaPredicted RBP10.57□□□□□ -0.72
NR1I3-217ENST00000502985 EFR3BQ9Y2G0 817 aa10.57□□□□□ -0.72
NR1I3-217ENST00000502985 R3HDM2Q9Y2K5 976 aaKnown RBP10.57□□□□□ -0.72
NR1I3-217ENST00000502985 ZKSCAN5Q9Y2L8 839 aa10.57□□□□□ -0.72
NR1I3-217ENST00000502985 FARP1Q9Y4F1 1045 aaPredicted RBP10.57□□□□□ -0.72
NR1I3-217ENST00000502985 MUC6Q6W4X9 2439 aa10.57□□□□□ -0.72
NR1I3-217ENST00000502985 SDK1Q7Z5N4 2213 aa10.57□□□□□ -0.72
NR1I3-217ENST00000502985 CACNA1HO95180 2353 aa10.57□□□□□ -0.72
NR1I3-217ENST00000502985 TNRC6BQ9UPQ9 1833 aaKnown RBP10.56□□□□□ -0.72
NR1I3-217ENST00000502985 TP53BP1Q12888 1972 aaPredicted RBP10.56□□□□□ -0.72
NR1I3-217ENST00000502985 CXorf51AA0A1B0GTR3 108 aa10.56□□□□□ -0.72
NR1I3-217ENST00000502985 C1QTNF3-AMACRE9PGA6 284 aa10.56□□□□□ -0.72
NR1I3-217ENST00000502985 KPNA3O00505 521 aaPredicted RBP10.56□□□□□ -0.72
NR1I3-217ENST00000502985 MCF2LO15068 1137 aa10.56□□□□□ -0.72
NR1I3-217ENST00000502985 MATN3O15232 486 aa10.56□□□□□ -0.72
NR1I3-217ENST00000502985 ALOX15BO15296 676 aa10.56□□□□□ -0.72
NR1I3-217ENST00000502985 LEFTY1O75610 366 aa10.56□□□□□ -0.72
NR1I3-217ENST00000502985 PIGNO95427 931 aa10.56□□□□□ -0.72
NR1I3-217ENST00000502985 FGGP02679 453 aa10.56□□□□□ -0.72
NR1I3-217ENST00000502985 DNTTP04053 509 aa10.56□□□□□ -0.72
NR1I3-217ENST00000502985 HLA-DQB2P05538 268 aa10.56□□□□□ -0.72
NR1I3-217ENST00000502985 ACADMP11310 421 aa10.56□□□□□ -0.72
NR1I3-217ENST00000502985 CCNB1P14635 433 aa10.56□□□□□ -0.72
NR1I3-217ENST00000502985 CCNCP24863 283 aa10.56□□□□□ -0.72
NR1I3-217ENST00000502985 CHRNA3P32297 505 aa10.56□□□□□ -0.72
NR1I3-217ENST00000502985 NUBP1P53384 320 aa10.56□□□□□ -0.72
NR1I3-217ENST00000502985 EIF3EP60228 445 aaKnown RBP10.56□□□□□ -0.72
NR1I3-217ENST00000502985 ITKQ08881 620 aa10.56□□□□□ -0.72
NR1I3-217ENST00000502985 TCF15Q12870 199 aa10.56□□□□□ -0.72
NR1I3-217ENST00000502985 KLF1Q13351 362 aaPredicted RBP10.56□□□□□ -0.72
NR1I3-217ENST00000502985 RFTN1Q14699 578 aaPredicted RBP10.56□□□□□ -0.72
NR1I3-217ENST00000502985 CST6Q15828 149 aa10.56□□□□□ -0.72
NR1I3-217ENST00000502985 TTC31Q49AM3 519 aaPredicted RBP10.56□□□□□ -0.72
NR1I3-217ENST00000502985 ARSIQ5FYB1 569 aa10.56□□□□□ -0.72
NR1I3-217ENST00000502985 MARC1Q5VT66 337 aa10.56□□□□□ -0.72
NR1I3-217ENST00000502985 BZW1Q7L1Q6 419 aaKnown RBP10.56□□□□□ -0.72
NR1I3-217ENST00000502985 DSG4Q86SJ6 1040 aa10.56□□□□□ -0.72
NR1I3-217ENST00000502985 LONP2Q86WA8 852 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms