RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 AGERQ15109 404 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 MAN2A1Q16706 1144 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 ALFQ53S48 1182 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 MANEALQ5VSG8 457 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 OR6B2Q6IFH4 312 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 KLHL10Q6JEL2 608 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 C22orf39Q6P5X5 142 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 LVRNQ6Q4G3 990 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 XKR5Q6UX68 686 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 GCNT7Q6ZNI0 430 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 C14orf80Q86SX3 495 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 MARCH9Q86YJ5 346 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 IRF2BP1Q8IU81 584 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 FAM114A1Q8IWE2 563 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 SPACA3Q8IXA5 215 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 MSANTD4Q8NCY6 345 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 ARRDC3Q96B67 414 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 C18orf8Q96DM3 657 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 DCBLD2Q96PD2 775 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 KLF6Q99612 283 aaPredicted RBP6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 HEPHQ9BQS7 1158 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 BOCQ9BWV1 1114 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 ZYG11BQ9C0D3 744 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 OSBPL2Q9H1P3 480 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 POLR1BQ9H9Y6 1135 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 ACP6Q9NPH0 428 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 KIAA1468Q9P260 1216 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 TMEM59LQ9UK28 342 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 ACSL6Q9UKU0 697 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 ZFR2Q9UPR6 939 aaKnown RBP6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 MFHAS1Q9Y4C4 1052 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 FADS3Q9Y5Q0 445 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 U3KQA8 63 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 ASXL3Q9C0F0 2248 aa6.23□□□□□ -1.41
LSM3P4-201ENST00000502948 LRRK1Q38SD2 2015 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 A0A0D9SEW6 157 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 ZSCAN5CA6NGD5 496 aaPredicted RBP6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 CDRT15L2A8MXV6 281 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 K7ESM1 405 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 FOXN3O00409 490 aaPredicted RBP6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 FPGTO14772 594 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 AREL1O15033 823 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 SMAD6O43541 496 aaKnown RBP6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 LEFTY1O75610 366 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 CNTN5O94779 1100 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 CD160O95971 181 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 ERCC5P28715 1186 aaPredicted RBP6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 PTPN9P43378 593 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 PEX5P50542 639 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 PFN3P60673 137 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 SNRPD1P62314 119 aaKnown RBP6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 ARF5P84085 180 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 GNA12Q03113 381 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 DEUP1Q05D60 604 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 NME3Q13232 169 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 FZD2Q14332 565 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 ISXQ2M1V0 245 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 ARL13BQ3SXY8 428 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 INO80DQ53TQ3 878 aaPredicted RBP6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 CARD16Q5EG05 197 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 ARSIQ5FYB1 569 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 BROXQ5VW32 411 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 ISM2Q6H9L7 571 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 PCSK4Q6UW60 755 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 DPY19L3Q6ZPD9 716 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 Q6ZSR6 202 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 STRADAQ7RTN6 431 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 CLEC14AQ86T13 490 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 SLC47A2Q86VL8 602 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 CIR1Q86X95 450 aaPredicted RBP6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 XYLT1Q86Y38 959 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 ZNF843Q8N446 348 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 ZNF548Q8NEK5 533 aaPredicted RBP6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 OR13H1Q8NG92 308 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 OR6C4Q8NGE1 309 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 CENPIQ92674 756 aaPredicted RBP6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 ARHGEF2Q92974 986 aaKnown RBP6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 NAT6Q93015 286 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 NTAN1Q96AB6 310 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 VOPP1Q96AW1 172 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 CENPTQ96BT3 561 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 CRELD1Q96HD1 420 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 SLC46A1Q96NT5 459 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 NAA15Q9BXJ9 866 aaKnown RBP6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 B3GNT4Q9C0J1 378 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 SIK2Q9H0K1 926 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 MAGEH1Q9H213 219 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 NDST4Q9H3R1 872 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 SYNCQ9H7C4 482 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 ASCL3Q9NQ33 180 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 ANLNQ9NQW6 1124 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 THSD1Q9NS62 852 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 TMEM248Q9NWD8 314 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 UCKL1Q9NWZ5 548 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 DKK3Q9UBP4 350 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 DNAJC12Q9UKB3 198 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 RAI2Q9Y5P3 530 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 SCN8AQ9UQD0 1980 aa6.22□□□□□ -1.41
LSM3P4-201ENST00000502948 GCN1Q92616 2671 aaKnown RBP6.21□□□□□ -1.42
LSM3P4-201ENST00000502948 CFAP69A5D8W1 941 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms