RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 SORT1Q99523 831 aa12.15□□□□□ -0.46
NUP54-202ENST00000502850 APOL2Q9BQE5 337 aa12.15□□□□□ -0.46
NUP54-202ENST00000502850 FICDQ9BVA6 458 aa12.15□□□□□ -0.46
NUP54-202ENST00000502850 SLC39A8Q9C0K1 460 aa12.15□□□□□ -0.46
NUP54-202ENST00000502850 C20orf27Q9GZN8 174 aa12.15□□□□□ -0.46
NUP54-202ENST00000502850 CDH19Q9H159 772 aa12.15□□□□□ -0.46
NUP54-202ENST00000502850 SLC25A51Q9H1U9 297 aa12.15□□□□□ -0.46
NUP54-202ENST00000502850 MRGBPQ9NV56 204 aa12.15□□□□□ -0.46
NUP54-202ENST00000502850 RBM22Q9NW64 420 aaKnown RBP eCLIP12.15□□□□□ -0.46
NUP54-202ENST00000502850 ABI2Q9NYB9 513 aaPredicted RBP12.15□□□□□ -0.46
NUP54-202ENST00000502850 IL1RAPL1Q9NZN1 696 aa12.15□□□□□ -0.46
NUP54-202ENST00000502850 IPO11Q9UI26 975 aaKnown RBP12.15□□□□□ -0.46
NUP54-202ENST00000502850 PCDHB5Q9Y5E4 795 aa12.15□□□□□ -0.46
NUP54-202ENST00000502850 HS3ST4Q9Y661 456 aa12.15□□□□□ -0.46
NUP54-202ENST00000502850 A0A087X1B8 175 aa12.15□□□□□ -0.47
NUP54-202ENST00000502850 A0A1W2PQH9 124 aa12.15□□□□□ -0.47
NUP54-202ENST00000502850 HEATR9A2RTY3 570 aa12.15□□□□□ -0.47
NUP54-202ENST00000502850 VGLL3A8MV65 326 aa12.15□□□□□ -0.47
NUP54-202ENST00000502850 SLC22A2O15244 555 aa12.15□□□□□ -0.47
NUP54-202ENST00000502850 ITM2AO43736 263 aa12.15□□□□□ -0.47
NUP54-202ENST00000502850 LYPLA1O75608 230 aaPredicted RBP12.15□□□□□ -0.47
NUP54-202ENST00000502850 DDHD2O94830 711 aa12.15□□□□□ -0.47
NUP54-202ENST00000502850 IBSPP21815 317 aaPredicted RBP12.15□□□□□ -0.47
NUP54-202ENST00000502850 ADRA1AP35348 466 aa12.15□□□□□ -0.47
NUP54-202ENST00000502850 SERPINB5P36952 375 aa12.15□□□□□ -0.47
NUP54-202ENST00000502850 CSRP3P50461 194 aa12.15□□□□□ -0.47
NUP54-202ENST00000502850 COPAP53621 1224 aa12.15□□□□□ -0.47
NUP54-202ENST00000502850 TBX4P57082 545 aa12.15□□□□□ -0.47
NUP54-202ENST00000502850 USP10Q14694 798 aaKnown RBP12.15□□□□□ -0.47
NUP54-202ENST00000502850 HSF5Q4G112 596 aaPredicted RBP12.15□□□□□ -0.47
NUP54-202ENST00000502850 RABGAP1LQ5R372 815 aa12.15□□□□□ -0.47
NUP54-202ENST00000502850 ZNF280DQ6N043 979 aa12.15□□□□□ -0.47
NUP54-202ENST00000502850 ZYG11AQ6WRX3 759 aa12.15□□□□□ -0.47
NUP54-202ENST00000502850 OTOP3Q7RTS5 596 aa12.15□□□□□ -0.47
NUP54-202ENST00000502850 TREML1Q86YW5 311 aa12.15□□□□□ -0.47
NUP54-202ENST00000502850 SCUBE1Q8IWY4 988 aa12.15□□□□□ -0.47
NUP54-202ENST00000502850 LMNTD2Q8IXW0 634 aa12.15□□□□□ -0.47
NUP54-202ENST00000502850 KIRREL3Q8IZU9 778 aa12.15□□□□□ -0.47
NUP54-202ENST00000502850 ATXN7L3BQ96GX2 97 aa12.15□□□□□ -0.47
NUP54-202ENST00000502850 SLC39A13Q96H72 371 aa12.15□□□□□ -0.47
NUP54-202ENST00000502850 HTATIP2Q9BUP3 242 aa12.15□□□□□ -0.47
NUP54-202ENST00000502850 OXCT2Q9BYC2 517 aaPredicted RBP12.15□□□□□ -0.47
NUP54-202ENST00000502850 ACE2Q9BYF1 805 aaPredicted RBP12.15□□□□□ -0.47
NUP54-202ENST00000502850 ZYG11BQ9C0D3 744 aa12.15□□□□□ -0.47
NUP54-202ENST00000502850 CRISPLD2Q9H0B8 497 aa12.15□□□□□ -0.47
NUP54-202ENST00000502850 ILKAPQ9H0C8 392 aaPredicted RBP12.15□□□□□ -0.47
NUP54-202ENST00000502850 TASP1Q9H6P5 420 aa12.15□□□□□ -0.47
NUP54-202ENST00000502850 HMX1Q9NP08 348 aaPredicted RBP12.15□□□□□ -0.47
NUP54-202ENST00000502850 OXSMQ9NWU1 459 aa12.15□□□□□ -0.47
NUP54-202ENST00000502850 CLIC5Q9NZA1 410 aa12.15□□□□□ -0.47
NUP54-202ENST00000502850 UBP1Q9NZI7 540 aa12.15□□□□□ -0.47
NUP54-202ENST00000502850 VTI1BQ9UEU0 232 aa12.15□□□□□ -0.47
NUP54-202ENST00000502850 SFMBT1Q9UHJ3 866 aa12.15□□□□□ -0.47
NUP54-202ENST00000502850 ANGPTL2Q9UKU9 493 aa12.15□□□□□ -0.47
NUP54-202ENST00000502850 SLC39A10Q9ULF5 831 aa12.15□□□□□ -0.47
NUP54-202ENST00000502850 GOLGA8QA0A0J9YX86 632 aa12.14□□□□□ -0.47
NUP54-202ENST00000502850 GOLGA8OA6NCC3 632 aa12.14□□□□□ -0.47
NUP54-202ENST00000502850 PRR5-ARHGAP8B1AHC4 643 aa12.14□□□□□ -0.47
NUP54-202ENST00000502850 GOLGA8NF8WBI6 632 aa12.14□□□□□ -0.47
NUP54-202ENST00000502850 G3V2L1 256 aa12.14□□□□□ -0.47
NUP54-202ENST00000502850 MSI1O43347 362 aaKnown RBP12.14□□□□□ -0.47
NUP54-202ENST00000502850 ENTPD5O75356 428 aa12.14□□□□□ -0.47
NUP54-202ENST00000502850 PAPSS2O95340 614 aaPredicted RBP12.14□□□□□ -0.47
NUP54-202ENST00000502850 PSMG1O95456 288 aa12.14□□□□□ -0.47
NUP54-202ENST00000502850 HLA-DQB2P05538 268 aa12.14□□□□□ -0.47
NUP54-202ENST00000502850 ITGB1P05556 798 aa12.14□□□□□ -0.47
NUP54-202ENST00000502850 CKBP12277 381 aa12.14□□□□□ -0.47
NUP54-202ENST00000502850 STMN1P16949 149 aa12.14□□□□□ -0.47
NUP54-202ENST00000502850 TPH1P17752 444 aa12.14□□□□□ -0.47
NUP54-202ENST00000502850 CCND3P30281 292 aaPredicted RBP12.14□□□□□ -0.47
NUP54-202ENST00000502850 VHLP40337 213 aa12.14□□□□□ -0.47
NUP54-202ENST00000502850 OR1G1P47890 313 aa12.14□□□□□ -0.47
NUP54-202ENST00000502850 CD151P48509 253 aa12.14□□□□□ -0.47
NUP54-202ENST00000502850 IDH3AP50213 366 aa12.14□□□□□ -0.47
NUP54-202ENST00000502850 PAPOLAP51003 745 aaKnown RBP12.14□□□□□ -0.47
NUP54-202ENST00000502850 KPNA1P52294 538 aaPredicted RBP12.14□□□□□ -0.47
NUP54-202ENST00000502850 ACLYP53396 1101 aa12.14□□□□□ -0.47
NUP54-202ENST00000502850 SLC12A2P55011 1212 aa12.14□□□□□ -0.47
NUP54-202ENST00000502850 RAB10P61026 200 aa12.14□□□□□ -0.47
NUP54-202ENST00000502850 FAM189BP81408 668 aa12.14□□□□□ -0.47
NUP54-202ENST00000502850 ARHGAP8P85298 464 aa12.14□□□□□ -0.47
NUP54-202ENST00000502850 TNK2Q07912 1038 aa12.14□□□□□ -0.47
NUP54-202ENST00000502850 TRIM32Q13049 653 aa12.14□□□□□ -0.47
NUP54-202ENST00000502850 TUBB3Q13509 450 aa12.14□□□□□ -0.47
NUP54-202ENST00000502850 GRM3Q14832 879 aa12.14□□□□□ -0.47
NUP54-202ENST00000502850 TAF11Q15544 211 aa12.14□□□□□ -0.47
NUP54-202ENST00000502850 GALNT7Q86SF2 657 aa12.14□□□□□ -0.47
NUP54-202ENST00000502850 SETD3Q86TU7 594 aaPredicted RBP12.14□□□□□ -0.47
NUP54-202ENST00000502850 COLGALT2Q8IYK4 626 aa12.14□□□□□ -0.47
NUP54-202ENST00000502850 MAB21L3Q8N8X9 362 aa12.14□□□□□ -0.47
NUP54-202ENST00000502850 PPFIBP2Q8ND30 876 aa12.14□□□□□ -0.47
NUP54-202ENST00000502850 RBM15BQ8NDT2 890 aaKnown RBP12.14□□□□□ -0.47
NUP54-202ENST00000502850 TSPAN17Q96FV3 270 aa12.14□□□□□ -0.47
NUP54-202ENST00000502850 ZNF778Q96MU6 729 aa12.14□□□□□ -0.47
NUP54-202ENST00000502850 FAM161BQ96MY7 647 aa12.14□□□□□ -0.47
NUP54-202ENST00000502850 MYCBPQ99417 103 aaPredicted RBP12.14□□□□□ -0.47
NUP54-202ENST00000502850 EBF4Q9BQW3 602 aa12.14□□□□□ -0.47
NUP54-202ENST00000502850 TSEN34Q9BSV6 310 aaKnown RBP12.14□□□□□ -0.47
NUP54-202ENST00000502850 ZNF395Q9H8N7 513 aaPredicted RBP12.14□□□□□ -0.47
NUP54-202ENST00000502850 ARNT2Q9HBZ2 717 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms