RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 OR2AP1Q8NGE2 309 aa17.05■□□□□ 0.32
PRKCB-210ENST00000498739 OR6K2Q8NGY2 324 aa17.05■□□□□ 0.32
PRKCB-210ENST00000498739 KRT35Q92764 455 aa17.05■□□□□ 0.32
PRKCB-210ENST00000498739 HEPHQ9BQS7 1158 aa17.05■□□□□ 0.32
PRKCB-210ENST00000498739 GPR174Q9BXC1 333 aa17.05■□□□□ 0.32
PRKCB-210ENST00000498739 BTBD1Q9H0C5 482 aa17.05■□□□□ 0.32
PRKCB-210ENST00000498739 ZDHHC6Q9H6R6 413 aa17.05■□□□□ 0.32
PRKCB-210ENST00000498739 HECAQ9UBI9 543 aaPredicted RBP17.05■□□□□ 0.32
PRKCB-210ENST00000498739 SERGEFQ9UGK8 458 aa17.05■□□□□ 0.32
PRKCB-210ENST00000498739 KPNA3O00505 521 aaPredicted RBP17.04■□□□□ 0.32
PRKCB-210ENST00000498739 APOL1O14791 398 aa17.04■□□□□ 0.32
PRKCB-210ENST00000498739 PALMO75781 387 aa17.04■□□□□ 0.32
PRKCB-210ENST00000498739 IGSF6O95976 241 aa17.04■□□□□ 0.32
PRKCB-210ENST00000498739 ACSL1P33121 698 aa17.04■□□□□ 0.32
PRKCB-210ENST00000498739 ARSIQ5FYB1 569 aa17.04■□□□□ 0.32
PRKCB-210ENST00000498739 ATXN7L2Q5T6C5 722 aaPredicted RBP17.04■□□□□ 0.32
PRKCB-210ENST00000498739 ALYREFQ86V81 257 aaKnown RBP17.04■□□□□ 0.32
PRKCB-210ENST00000498739 CCDC50Q8IVM0 306 aa17.04■□□□□ 0.32
PRKCB-210ENST00000498739 PLPP6Q8IY26 295 aa17.04■□□□□ 0.32
PRKCB-210ENST00000498739 KATNAL2Q8IYT4 538 aa17.04■□□□□ 0.32
PRKCB-210ENST00000498739 SYCE1Q8N0S2 351 aa17.04■□□□□ 0.32
PRKCB-210ENST00000498739 LRRC57Q8N9N7 239 aa17.04■□□□□ 0.32
PRKCB-210ENST00000498739 EXOC2Q96KP1 924 aa17.04■□□□□ 0.32
PRKCB-210ENST00000498739 GDAP1L1Q96MZ0 367 aa17.04■□□□□ 0.32
PRKCB-210ENST00000498739 NEUROG2Q9H2A3 272 aa17.04■□□□□ 0.32
PRKCB-210ENST00000498739 LHX3Q9UBR4 397 aa17.04■□□□□ 0.32
PRKCB-210ENST00000498739 GUCA1BQ9UMX6 200 aa17.04■□□□□ 0.32
PRKCB-210ENST00000498739 WASF2Q9Y6W5 498 aa17.04■□□□□ 0.32
PRKCB-210ENST00000498739 PLK4O00444 970 aa17.03■□□□□ 0.32
PRKCB-210ENST00000498739 KRIT1O00522 736 aa17.03■□□□□ 0.32
PRKCB-210ENST00000498739 MAFKO60675 156 aa17.03■□□□□ 0.32
PRKCB-210ENST00000498739 LEFTY1O75610 366 aa17.03■□□□□ 0.32
PRKCB-210ENST00000498739 EPN2O95208 641 aa17.03■□□□□ 0.32
PRKCB-210ENST00000498739 ZRANB2O95218 330 aaKnown RBP eCLIP17.03■□□□□ 0.32
PRKCB-210ENST00000498739 RETP07949 1114 aa17.03■□□□□ 0.32
PRKCB-210ENST00000498739 GKP32189 559 aa17.03■□□□□ 0.32
PRKCB-210ENST00000498739 CTNNA1P35221 906 aaKnown RBP17.03■□□□□ 0.32
PRKCB-210ENST00000498739 DRD3P35462 400 aa17.03■□□□□ 0.32
PRKCB-210ENST00000498739 PTGER3P43115 390 aa17.03■□□□□ 0.32
PRKCB-210ENST00000498739 DYNLT1P63172 113 aa17.03■□□□□ 0.32
PRKCB-210ENST00000498739 GBE1Q04446 702 aa17.03■□□□□ 0.32
PRKCB-210ENST00000498739 RFTN1Q14699 578 aaPredicted RBP17.03■□□□□ 0.32
PRKCB-210ENST00000498739 LBRQ14739 615 aaKnown RBP17.03■□□□□ 0.32
PRKCB-210ENST00000498739 KAZNQ674X7 775 aa17.03■□□□□ 0.32
PRKCB-210ENST00000498739 SLC9A4Q6AI14 798 aa17.03■□□□□ 0.32
PRKCB-210ENST00000498739 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.03■□□□□ 0.32
PRKCB-210ENST00000498739 SPOCD1Q6ZMY3 1216 aa17.03■□□□□ 0.32
PRKCB-210ENST00000498739 PEX26Q7Z412 305 aa17.03■□□□□ 0.32
PRKCB-210ENST00000498739 PLD5Q8N7P1 536 aa17.03■□□□□ 0.32
PRKCB-210ENST00000498739 TMIEQ8NEW7 156 aa17.03■□□□□ 0.32
PRKCB-210ENST00000498739 NSMCE1Q8WV22 266 aa17.03■□□□□ 0.32
PRKCB-210ENST00000498739 RUBCNQ92622 972 aa17.03■□□□□ 0.32
PRKCB-210ENST00000498739 RBM41Q96IZ5 413 aaKnown RBP17.03■□□□□ 0.32
PRKCB-210ENST00000498739 LOXL4Q96JB6 756 aa17.03■□□□□ 0.32
PRKCB-210ENST00000498739 ZNF599Q96NL3 588 aa17.03■□□□□ 0.32
PRKCB-210ENST00000498739 CINPQ9BW66 212 aaPredicted RBP17.03■□□□□ 0.32
PRKCB-210ENST00000498739 SGK2Q9HBY8 427 aa17.03■□□□□ 0.32
PRKCB-210ENST00000498739 DYRK4Q9NR20 520 aa17.03■□□□□ 0.32
PRKCB-210ENST00000498739 AMFRQ9UKV5 643 aa17.03■□□□□ 0.32
PRKCB-210ENST00000498739 FZD4Q9ULV1 537 aa17.03■□□□□ 0.32
PRKCB-210ENST00000498739 PCDHA3Q9Y5H8 950 aa17.03■□□□□ 0.32
PRKCB-210ENST00000498739 CAPN6Q9Y6Q1 641 aa17.03■□□□□ 0.32
PRKCB-210ENST00000498739 PLXND1Q9Y4D7 1925 aa17.03■□□□□ 0.32
PRKCB-210ENST00000498739 CACNA1HO95180 2353 aa17.02■□□□□ 0.32
PRKCB-210ENST00000498739 CCDC66A2RUB6 948 aa17.02■□□□□ 0.32
PRKCB-210ENST00000498739 RNF103O00237 685 aa17.02■□□□□ 0.32
PRKCB-210ENST00000498739 KRT10P13645 584 aa17.02■□□□□ 0.32
PRKCB-210ENST00000498739 ZFXP17010 805 aaPredicted RBP17.02■□□□□ 0.32
PRKCB-210ENST00000498739 CTNNA2P26232 953 aa17.02■□□□□ 0.32
PRKCB-210ENST00000498739 GARSP41250 739 aaKnown RBP17.02■□□□□ 0.32
PRKCB-210ENST00000498739 CDKN2BP42772 138 aa17.02■□□□□ 0.32
PRKCB-210ENST00000498739 CREB5Q02930 508 aa17.02■□□□□ 0.32
PRKCB-210ENST00000498739 ZNF33AQ06730 810 aa17.02■□□□□ 0.32
PRKCB-210ENST00000498739 SLC10A7Q0GE19 358 aa17.02■□□□□ 0.32
PRKCB-210ENST00000498739 GALNT2Q10471 571 aa17.02■□□□□ 0.32
PRKCB-210ENST00000498739 LLGL1Q15334 1064 aa17.02■□□□□ 0.32
PRKCB-210ENST00000498739 MYLK3Q32MK0 819 aa17.02■□□□□ 0.32
PRKCB-210ENST00000498739 SPDYCQ5MJ68 293 aa17.02■□□□□ 0.32
PRKCB-210ENST00000498739 TMCO4Q5TGY1 634 aa17.02■□□□□ 0.32
PRKCB-210ENST00000498739 LYSMD4Q5XG99 296 aa17.02■□□□□ 0.32
PRKCB-210ENST00000498739 CYP2U1Q7Z449 544 aa17.02■□□□□ 0.32
PRKCB-210ENST00000498739 NT5DC3Q86UY8 548 aa17.02■□□□□ 0.32
PRKCB-210ENST00000498739 LRRC49Q8IUZ0 686 aa17.02■□□□□ 0.32
PRKCB-210ENST00000498739 SLC41A1Q8IVJ1 513 aa17.02■□□□□ 0.32
PRKCB-210ENST00000498739 RCOR2Q8IZ40 523 aa17.02■□□□□ 0.32
PRKCB-210ENST00000498739 DCLK2Q8N568 766 aa17.02■□□□□ 0.32
PRKCB-210ENST00000498739 RNF10Q8N5U6 811 aaKnown RBP17.02■□□□□ 0.32
PRKCB-210ENST00000498739 TSEN2Q8NCE0 465 aaKnown RBP17.02■□□□□ 0.32
PRKCB-210ENST00000498739 EXD1Q8NHP7 514 aa17.02■□□□□ 0.32
PRKCB-210ENST00000498739 ARRDC3Q96B67 414 aa17.02■□□□□ 0.32
PRKCB-210ENST00000498739 PPP1R16AQ96I34 528 aa17.02■□□□□ 0.32
PRKCB-210ENST00000498739 HSPA12BQ96MM6 686 aa17.02■□□□□ 0.32
PRKCB-210ENST00000498739 ZNF830Q96NB3 372 aaPredicted RBP17.02■□□□□ 0.32
PRKCB-210ENST00000498739 ARRDC1-AS1Q9H2J1 176 aa17.02■□□□□ 0.32
PRKCB-210ENST00000498739 LZTFL1Q9NQ48 299 aa17.02■□□□□ 0.32
PRKCB-210ENST00000498739 DTLQ9NZJ0 730 aa17.02■□□□□ 0.32
PRKCB-210ENST00000498739 EVLQ9UI08 416 aaPredicted RBP17.02■□□□□ 0.32
PRKCB-210ENST00000498739 HEY1Q9Y5J3 304 aa17.02■□□□□ 0.32
PRKCB-210ENST00000498739 FAM47DPA6NHR8 397 aa17.01■□□□□ 0.31
PRKCB-210ENST00000498739 MEI4A8MW99 385 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms