RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 AMPD1P23109 780 aa13.03□□□□□ -0.32
HSPG2-213ENST00000498495 CD27P26842 260 aa13.03□□□□□ -0.32
HSPG2-213ENST00000498495 DRD3P35462 400 aa13.03□□□□□ -0.32
HSPG2-213ENST00000498495 ARHGAP25P42331 645 aa13.03□□□□□ -0.32
HSPG2-213ENST00000498495 PAPOLAP51003 745 aaKnown RBP13.03□□□□□ -0.32
HSPG2-213ENST00000498495 CCNHP51946 323 aaPredicted RBP13.03□□□□□ -0.32
HSPG2-213ENST00000498495 METAP1P53582 386 aa13.03□□□□□ -0.32
HSPG2-213ENST00000498495 LIMK1P53667 647 aa13.03□□□□□ -0.32
HSPG2-213ENST00000498495 CDH6P55285 790 aa13.03□□□□□ -0.32
HSPG2-213ENST00000498495 SLC25A11Q02978 314 aaKnown RBP13.03□□□□□ -0.32
HSPG2-213ENST00000498495 CNTN1Q12860 1018 aa13.03□□□□□ -0.32
HSPG2-213ENST00000498495 MESDQ14696 234 aa13.03□□□□□ -0.32
HSPG2-213ENST00000498495 ZFYVE27Q5T4F4 411 aa13.03□□□□□ -0.32
HSPG2-213ENST00000498495 RHOT2Q8IXI1 618 aa13.03□□□□□ -0.32
HSPG2-213ENST00000498495 CCDC170Q8IYT3 715 aa13.03□□□□□ -0.32
HSPG2-213ENST00000498495 ZCCHC9Q8N567 271 aaKnown RBP13.03□□□□□ -0.32
HSPG2-213ENST00000498495 KCTD6Q8NC69 237 aa13.03□□□□□ -0.32
HSPG2-213ENST00000498495 OR2AP1Q8NGE2 309 aa13.03□□□□□ -0.32
HSPG2-213ENST00000498495 GRIN3AQ8TCU5 1115 aa13.03□□□□□ -0.32
HSPG2-213ENST00000498495 PPP1R16AQ96I34 528 aa13.03□□□□□ -0.32
HSPG2-213ENST00000498495 KLC2Q9H0B6 622 aa13.03□□□□□ -0.32
HSPG2-213ENST00000498495 KDM4CQ9H3R0 1056 aa13.03□□□□□ -0.32
HSPG2-213ENST00000498495 TMEM9BQ9NQ34 198 aa13.03□□□□□ -0.32
HSPG2-213ENST00000498495 INTUQ9ULD6 942 aa13.03□□□□□ -0.32
HSPG2-213ENST00000498495 C4orf47A7E2U8 309 aa13.02□□□□□ -0.33
HSPG2-213ENST00000498495 J3KR12 359 aa13.02□□□□□ -0.33
HSPG2-213ENST00000498495 DFFAO00273 331 aa13.02□□□□□ -0.33
HSPG2-213ENST00000498495 ARHGAP33O14559 1287 aa13.02□□□□□ -0.33
HSPG2-213ENST00000498495 TMCC1O94876 653 aa13.02□□□□□ -0.33
HSPG2-213ENST00000498495 POP4O95707 220 aaKnown RBP13.02□□□□□ -0.33
HSPG2-213ENST00000498495 GSRP00390 522 aa13.02□□□□□ -0.33
HSPG2-213ENST00000498495 KRT7P08729 469 aa13.02□□□□□ -0.33
HSPG2-213ENST00000498495 CYLC1P35663 651 aaPredicted RBP13.02□□□□□ -0.33
HSPG2-213ENST00000498495 GJC1P36383 396 aa13.02□□□□□ -0.33
HSPG2-213ENST00000498495 MAPK8P45983 427 aa13.02□□□□□ -0.33
HSPG2-213ENST00000498495 ADPRHP54922 357 aa13.02□□□□□ -0.33
HSPG2-213ENST00000498495 RHOAP61586 193 aa13.02□□□□□ -0.33
HSPG2-213ENST00000498495 RAD51Q06609 339 aa13.02□□□□□ -0.33
HSPG2-213ENST00000498495 DPYSQ14117 519 aa13.02□□□□□ -0.33
HSPG2-213ENST00000498495 SPA17Q15506 151 aa13.02□□□□□ -0.33
HSPG2-213ENST00000498495 MYLK3Q32MK0 819 aa13.02□□□□□ -0.33
HSPG2-213ENST00000498495 ATP13A4Q4VNC1 1196 aa13.02□□□□□ -0.33
HSPG2-213ENST00000498495 TMCO3Q6UWJ1 677 aa13.02□□□□□ -0.33
HSPG2-213ENST00000498495 PRPF39Q86UA1 669 aaKnown RBP13.02□□□□□ -0.33
HSPG2-213ENST00000498495 MAP7D3Q8IWC1 876 aa13.02□□□□□ -0.33
HSPG2-213ENST00000498495 ARRDC3Q96B67 414 aa13.02□□□□□ -0.33
HSPG2-213ENST00000498495 LRIG1Q96JA1 1093 aa13.02□□□□□ -0.33
HSPG2-213ENST00000498495 CSPG4P5Q96PW8 444 aa13.02□□□□□ -0.33
HSPG2-213ENST00000498495 PANX2Q96RD6 677 aa13.02□□□□□ -0.33
HSPG2-213ENST00000498495 GTPBP2Q9BX10 602 aaKnown RBP13.02□□□□□ -0.33
HSPG2-213ENST00000498495 ZDHHC6Q9H6R6 413 aa13.02□□□□□ -0.33
HSPG2-213ENST00000498495 CAPN10Q9HC96 672 aa13.02□□□□□ -0.33
HSPG2-213ENST00000498495 PCDH18Q9HCL0 1135 aa13.02□□□□□ -0.33
HSPG2-213ENST00000498495 FSCN3Q9NQT6 498 aa13.02□□□□□ -0.33
HSPG2-213ENST00000498495 UBA2Q9UBT2 640 aaPredicted RBP13.02□□□□□ -0.33
HSPG2-213ENST00000498495 TPX2Q9ULW0 747 aaKnown RBP13.02□□□□□ -0.33
HSPG2-213ENST00000498495 WASF2Q9Y6W5 498 aa13.02□□□□□ -0.33
HSPG2-213ENST00000498495 A0A1W2PPC4 97 aa13.01□□□□□ -0.33
HSPG2-213ENST00000498495 KRIT1O00522 736 aa13.01□□□□□ -0.33
HSPG2-213ENST00000498495 CDX4O14627 284 aaPredicted RBP13.01□□□□□ -0.33
HSPG2-213ENST00000498495 PLRG1O43660 514 aaKnown RBP13.01□□□□□ -0.33
HSPG2-213ENST00000498495 PRAMEF11O60813 436 aa13.01□□□□□ -0.33
HSPG2-213ENST00000498495 PALMO75781 387 aa13.01□□□□□ -0.33
HSPG2-213ENST00000498495 IGSF6O95976 241 aa13.01□□□□□ -0.33
HSPG2-213ENST00000498495 IGHV4-34P06331 123 aa13.01□□□□□ -0.33
HSPG2-213ENST00000498495 GKP32189 559 aa13.01□□□□□ -0.33
HSPG2-213ENST00000498495 MAN1A1P33908 653 aa13.01□□□□□ -0.33
HSPG2-213ENST00000498495 NOP2P46087 812 aaKnown RBP13.01□□□□□ -0.33
HSPG2-213ENST00000498495 CCR5P51681 352 aa13.01□□□□□ -0.33
HSPG2-213ENST00000498495 TAS2R40P59535 323 aa13.01□□□□□ -0.33
HSPG2-213ENST00000498495 PDK2Q15119 407 aa13.01□□□□□ -0.33
HSPG2-213ENST00000498495 CYTH1Q15438 398 aa13.01□□□□□ -0.33
HSPG2-213ENST00000498495 TEAD4Q15561 434 aa13.01□□□□□ -0.33
HSPG2-213ENST00000498495 UAP1L1Q3KQV9 507 aa13.01□□□□□ -0.33
HSPG2-213ENST00000498495 AGBL4Q5VU57 503 aa13.01□□□□□ -0.33
HSPG2-213ENST00000498495 AFMIDQ63HM1 303 aa13.01□□□□□ -0.33
HSPG2-213ENST00000498495 FBXL19Q6PCT2 694 aa13.01□□□□□ -0.33
HSPG2-213ENST00000498495 ERN2Q76MJ5 926 aaKnown RBP13.01□□□□□ -0.33
HSPG2-213ENST00000498495 TMTC1Q8IUR5 882 aa13.01□□□□□ -0.33
HSPG2-213ENST00000498495 ARHGAP12Q8IWW6 846 aa13.01□□□□□ -0.33
HSPG2-213ENST00000498495 NETO2Q8NC67 525 aa13.01□□□□□ -0.33
HSPG2-213ENST00000498495 OR6K2Q8NGY2 324 aa13.01□□□□□ -0.33
HSPG2-213ENST00000498495 C1orf216Q8TAB5 229 aa13.01□□□□□ -0.33
HSPG2-213ENST00000498495 RFFLQ8WZ73 363 aa13.01□□□□□ -0.33
HSPG2-213ENST00000498495 FAM131CQ96AQ9 280 aa13.01□□□□□ -0.33
HSPG2-213ENST00000498495 GDAP1L1Q96MZ0 367 aa13.01□□□□□ -0.33
HSPG2-213ENST00000498495 HDAC8Q9BY41 377 aa13.01□□□□□ -0.33
HSPG2-213ENST00000498495 SP110Q9HB58 689 aa13.01□□□□□ -0.33
HSPG2-213ENST00000498495 LUC7LQ9NQ29 371 aaKnown RBP13.01□□□□□ -0.33
HSPG2-213ENST00000498495 RCOR3Q9P2K3 495 aaPredicted RBP13.01□□□□□ -0.33
HSPG2-213ENST00000498495 PCDHA13Q9Y5I0 950 aa13.01□□□□□ -0.33
HSPG2-213ENST00000498495 EPN1Q9Y6I3 576 aaPredicted RBP13.01□□□□□ -0.33
HSPG2-213ENST00000498495 TNRC6BQ9UPQ9 1833 aaKnown RBP13.01□□□□□ -0.33
HSPG2-213ENST00000498495 DCDC2BA2VCK2 349 aa13□□□□□ -0.33
HSPG2-213ENST00000498495 RNF103O00237 685 aa13□□□□□ -0.33
HSPG2-213ENST00000498495 MTA2O94776 668 aa13□□□□□ -0.33
HSPG2-213ENST00000498495 LCA5LO95447 670 aa13□□□□□ -0.33
HSPG2-213ENST00000498495 IL4RP24394 825 aa13□□□□□ -0.33
HSPG2-213ENST00000498495 SERPINB6P35237 376 aa13□□□□□ -0.33
HSPG2-213ENST00000498495 CSNK1EP49674 416 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms