RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 UBA2Q9UBT2 640 aaPredicted RBP8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 SOX13Q9UN79 622 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 SMG5Q9UPR3 1016 aaKnown RBP8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 RPS6KL1Q9Y6S9 549 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 PDE4DIPQ5VU43 2346 aa8.21□□□□□ -1.1
PDZRN3-212ENST00000498048 CEP290O15078 2479 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 FAM47DPA6NHR8 397 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 SRRM3A6NNA2 597 aaPredicted RBP8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 H3BNC9 293 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 GPR37O15354 613 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 PRPF4O43172 522 aaKnown RBP eCLIP8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 CACNG3O60359 315 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 TBL1XO60907 577 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 SPAG7O75391 227 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 USP1O94782 785 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 ARHGEF15O94989 841 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 LUC7L3O95232 432 aaKnown RBP8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 FGF19O95750 216 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 PEX11BO96011 259 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 C1QAP02745 245 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 CA3P07451 260 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 MYOGP15173 224 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 CREB1P16220 341 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 GJA1P17302 382 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 PFKLP17858 780 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 HDCP19113 662 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 DDX6P26196 483 aaKnown RBP eCLIP8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 HOXA9P31269 272 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 CD86P42081 329 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 NPY2RP49146 381 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 SERPINB9P50453 376 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 SLC7A9P82251 487 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 DSC2Q02487 901 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 NIPAL4Q0D2K0 466 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 SLC10A7Q0GE19 358 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 ZNF177Q13360 481 aaPredicted RBP8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 CDH18Q13634 790 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 SEPT6Q14141 434 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 ARHGAP15Q53QZ3 475 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 STXBP5Q5T5C0 1151 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 GPR158Q5T848 1215 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 ELMSAN1Q6PJG2 1045 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 Q6ZNB5 142 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 SETD3Q86TU7 594 aaPredicted RBP8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 TAX1BP1Q86VP1 789 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 SLC26A11Q86WA9 606 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 CARNMT1Q8N4J0 409 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 SHKBP1Q8TBC3 707 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 MDM1Q8TC05 714 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 SPPL3Q8TCT6 385 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 MICAL1Q8TDZ2 1067 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 ADAMTS19Q8TE59 1207 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 MZB1Q8WU39 189 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 ARNTL2Q8WYA1 636 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 APOPT1Q96IL0 206 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 ZNF599Q96NL3 588 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 LRRC3Q9BY71 257 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 POLR1EQ9GZS1 481 aaKnown RBP8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 PPANQ9NQ55 473 aaKnown RBP8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 SMYD2Q9NRG4 433 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 HCFC1R1Q9NWW0 138 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 ZFATQ9P243 1243 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 CFAP97Q9P2B7 532 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 SLC17A6Q9P2U8 582 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 ZNF180Q9UJW8 692 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 STOML2Q9UJZ1 356 aa8.2□□□□□ -1.1
PDZRN3-212ENST00000498048 A0A0D9SEW6 157 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 FAM237BA0A1B0GVD1 139 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 ILVBLA1L0T0 632 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 CXorf49A8MYA2 514 aaPredicted RBP8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 TRIM49D1C9J1S8 452 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 H0Y626 953 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 GRM6O15303 877 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 XYLBO75191 536 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 RFPL2O75678 378 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 KRT37O76014 449 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 KRT38O76015 456 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 C1RP00736 705 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 RB1P06400 928 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 EPCAMP16422 314 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 CA4P22748 312 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 CNTFP26441 200 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 IRS1P35568 1242 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 WNT3AP56704 352 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 TNK2Q07912 1038 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 MGAT5Q09328 741 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 BMPR2Q13873 1038 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 POU6F1Q14863 301 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 LRRC14Q15048 493 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 C9orf50Q5SZB4 431 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 CERCAMQ5T4B2 595 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 RNF219Q5W0B1 726 aaPredicted RBP8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 CXorf57Q6NSI4 855 aaKnown RBP8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 ZNF449Q6P9G9 518 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 KDELC1Q6UW63 502 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 CES3Q6UWW8 571 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 ZNF783Q6ZMS7 281 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 RTL10Q7L3V2 364 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms