RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 PPM1HQ9ULR3 514 aa11.68□□□□□ -0.54
HLA-B-254ENST00000497377 TPX2Q9ULW0 747 aaKnown RBP11.68□□□□□ -0.54
HLA-B-254ENST00000497377 CFAP54Q96N23 3096 aa11.67□□□□□ -0.54
HLA-B-254ENST00000497377 SOWAHDA6NJG2 315 aa11.67□□□□□ -0.54
HLA-B-254ENST00000497377 ZNF487B1APH4 448 aa11.67□□□□□ -0.54
HLA-B-254ENST00000497377 PRAMEF11O60813 436 aa11.67□□□□□ -0.54
HLA-B-254ENST00000497377 SEMA4FO95754 770 aa11.67□□□□□ -0.54
HLA-B-254ENST00000497377 CD160O95971 181 aa11.67□□□□□ -0.54
HLA-B-254ENST00000497377 GSRP00390 522 aa11.67□□□□□ -0.54
HLA-B-254ENST00000497377 TGM1P22735 817 aa11.67□□□□□ -0.54
HLA-B-254ENST00000497377 CHRNA3P32297 505 aa11.67□□□□□ -0.54
HLA-B-254ENST00000497377 SERPINB6P35237 376 aa11.67□□□□□ -0.54
HLA-B-254ENST00000497377 PTGER3P43115 390 aa11.67□□□□□ -0.54
HLA-B-254ENST00000497377 ARSEP51690 589 aa11.67□□□□□ -0.54
HLA-B-254ENST00000497377 CDH6P55285 790 aa11.67□□□□□ -0.54
HLA-B-254ENST00000497377 SNRPD1P62314 119 aaKnown RBP11.67□□□□□ -0.54
HLA-B-254ENST00000497377 LMNB2Q03252 620 aa11.67□□□□□ -0.54
HLA-B-254ENST00000497377 CARD16Q5EG05 197 aa11.67□□□□□ -0.54
HLA-B-254ENST00000497377 WDR45BQ5MNZ6 344 aa11.67□□□□□ -0.54
HLA-B-254ENST00000497377 LRRC38Q5VT99 294 aa11.67□□□□□ -0.54
HLA-B-254ENST00000497377 PEAR1Q5VY43 1037 aaPredicted RBP11.67□□□□□ -0.54
HLA-B-254ENST00000497377 TXNRD3NBQ6F5E7 133 aa11.67□□□□□ -0.54
HLA-B-254ENST00000497377 VSIG1Q86XK7 387 aa11.67□□□□□ -0.54
HLA-B-254ENST00000497377 LRRC49Q8IUZ0 686 aa11.67□□□□□ -0.54
HLA-B-254ENST00000497377 KCTD6Q8NC69 237 aa11.67□□□□□ -0.54
HLA-B-254ENST00000497377 CEP76Q8TAP6 659 aa11.67□□□□□ -0.54
HLA-B-254ENST00000497377 PIP4K2CQ8TBX8 421 aa11.67□□□□□ -0.54
HLA-B-254ENST00000497377 DNASE2BQ8WZ79 361 aa11.67□□□□□ -0.54
HLA-B-254ENST00000497377 TSC1Q92574 1164 aa11.67□□□□□ -0.54
HLA-B-254ENST00000497377 FAM131CQ96AQ9 280 aa11.67□□□□□ -0.54
HLA-B-254ENST00000497377 PPP1R16AQ96I34 528 aa11.67□□□□□ -0.54
HLA-B-254ENST00000497377 LRIG1Q96JA1 1093 aa11.67□□□□□ -0.54
HLA-B-254ENST00000497377 HSPA12BQ96MM6 686 aa11.67□□□□□ -0.54
HLA-B-254ENST00000497377 ZNF670Q9BS34 389 aa11.67□□□□□ -0.54
HLA-B-254ENST00000497377 KLC2Q9H0B6 622 aa11.67□□□□□ -0.54
HLA-B-254ENST00000497377 SUSD2Q9UGT4 822 aa11.67□□□□□ -0.54
HLA-B-254ENST00000497377 IL36AQ9UHA7 158 aa11.67□□□□□ -0.54
HLA-B-254ENST00000497377 A0A1W2PP55 124 aa11.66□□□□□ -0.54
HLA-B-254ENST00000497377 LRRC72A6NJI9 287 aa11.66□□□□□ -0.54
HLA-B-254ENST00000497377 TMEM110-MUSTN1A8MSY1 372 aa11.66□□□□□ -0.54
HLA-B-254ENST00000497377 METTL12A8MUP2 240 aa11.66□□□□□ -0.54
HLA-B-254ENST00000497377 BTNL10A8MVZ5 291 aa11.66□□□□□ -0.54
HLA-B-254ENST00000497377 MEI4A8MW99 385 aa11.66□□□□□ -0.54
HLA-B-254ENST00000497377 PRR5-ARHGAP8B1AHC4 643 aa11.66□□□□□ -0.54
HLA-B-254ENST00000497377 BNIP3LO60238 219 aa11.66□□□□□ -0.54
HLA-B-254ENST00000497377 ZNF821O75541 412 aaPredicted RBP11.66□□□□□ -0.54
HLA-B-254ENST00000497377 RNASEH2AO75792 299 aaKnown RBP11.66□□□□□ -0.54
HLA-B-254ENST00000497377 TMCC1O94876 653 aa11.66□□□□□ -0.54
HLA-B-254ENST00000497377 GNSP15586 552 aa11.66□□□□□ -0.54
HLA-B-254ENST00000497377 AMPD1P23109 780 aa11.66□□□□□ -0.54
HLA-B-254ENST00000497377 ACSL1P33121 698 aa11.66□□□□□ -0.54
HLA-B-254ENST00000497377 NOP2P46087 812 aaKnown RBP11.66□□□□□ -0.54
HLA-B-254ENST00000497377 PAPOLAP51003 745 aaKnown RBP11.66□□□□□ -0.54
HLA-B-254ENST00000497377 DNA2P51530 1060 aa11.66□□□□□ -0.54
HLA-B-254ENST00000497377 TAS2R40P59535 323 aa11.66□□□□□ -0.54
HLA-B-254ENST00000497377 ARHGAP8P85298 464 aa11.66□□□□□ -0.54
HLA-B-254ENST00000497377 RFTN1Q14699 578 aaPredicted RBP11.66□□□□□ -0.54
HLA-B-254ENST00000497377 TMCO4Q5TGY1 634 aa11.66□□□□□ -0.54
HLA-B-254ENST00000497377 DPY19L3Q6ZPD9 716 aa11.66□□□□□ -0.54
HLA-B-254ENST00000497377 PRR23CQ6ZRP0 262 aa11.66□□□□□ -0.54
HLA-B-254ENST00000497377 FAM124AQ86V42 546 aa11.66□□□□□ -0.54
HLA-B-254ENST00000497377 SLC41A1Q8IVJ1 513 aa11.66□□□□□ -0.54
HLA-B-254ENST00000497377 ARHGAP12Q8IWW6 846 aa11.66□□□□□ -0.54
HLA-B-254ENST00000497377 HDDC3Q8N4P3 179 aa11.66□□□□□ -0.54
HLA-B-254ENST00000497377 AADATQ8N5Z0 425 aa11.66□□□□□ -0.54
HLA-B-254ENST00000497377 C12orf50Q8NA57 414 aaPredicted RBP11.66□□□□□ -0.54
HLA-B-254ENST00000497377 SPC24Q8NBT2 197 aa11.66□□□□□ -0.54
HLA-B-254ENST00000497377 OR2AP1Q8NGE2 309 aa11.66□□□□□ -0.54
HLA-B-254ENST00000497377 OR2T34Q8NGX1 318 aa11.66□□□□□ -0.54
HLA-B-254ENST00000497377 PIGKQ92643 395 aa11.66□□□□□ -0.54
HLA-B-254ENST00000497377 GDAP1L1Q96MZ0 367 aa11.66□□□□□ -0.54
HLA-B-254ENST00000497377 HEPHQ9BQS7 1158 aa11.66□□□□□ -0.54
HLA-B-254ENST00000497377 CALN1Q9BXU9 219 aa11.66□□□□□ -0.54
HLA-B-254ENST00000497377 SLC39A8Q9C0K1 460 aa11.66□□□□□ -0.54
HLA-B-254ENST00000497377 NEUROG2Q9H2A3 272 aa11.66□□□□□ -0.54
HLA-B-254ENST00000497377 TNKS2Q9H2K2 1166 aa11.66□□□□□ -0.54
HLA-B-254ENST00000497377 PDFQ9HBH1 243 aa11.66□□□□□ -0.54
HLA-B-254ENST00000497377 PARD6AQ9NPB6 346 aa11.66□□□□□ -0.54
HLA-B-254ENST00000497377 DYRK4Q9NR20 520 aa11.66□□□□□ -0.54
HLA-B-254ENST00000497377 UBA2Q9UBT2 640 aaPredicted RBP11.66□□□□□ -0.54
HLA-B-254ENST00000497377 EVLQ9UI08 416 aaPredicted RBP11.66□□□□□ -0.54
HLA-B-254ENST00000497377 PILRBQ9UKJ0 227 aa11.66□□□□□ -0.54
HLA-B-254ENST00000497377 FCF1Q9Y324 198 aaKnown RBP11.66□□□□□ -0.54
HLA-B-254ENST00000497377 GON4LQ3T8J9 2241 aa11.66□□□□□ -0.54
HLA-B-254ENST00000497377 PI4KAP42356 2102 aa11.65□□□□□ -0.54
HLA-B-254ENST00000497377 NUMA1Q14980 2115 aa11.65□□□□□ -0.54
HLA-B-254ENST00000497377 KHNYNO15037 678 aaKnown RBP11.65□□□□□ -0.54
HLA-B-254ENST00000497377 POP4O95707 220 aaKnown RBP11.65□□□□□ -0.54
HLA-B-254ENST00000497377 IGSF6O95976 241 aa11.65□□□□□ -0.54
HLA-B-254ENST00000497377 SDHBP21912 280 aa11.65□□□□□ -0.54
HLA-B-254ENST00000497377 ITPKAP23677 461 aa11.65□□□□□ -0.54
HLA-B-254ENST00000497377 IL4RP24394 825 aa11.65□□□□□ -0.54
HLA-B-254ENST00000497377 DRD3P35462 400 aa11.65□□□□□ -0.54
HLA-B-254ENST00000497377 GJC1P36383 396 aa11.65□□□□□ -0.54
HLA-B-254ENST00000497377 CCNHP51946 323 aaPredicted RBP11.65□□□□□ -0.54
HLA-B-254ENST00000497377 RAD51Q06609 339 aa11.65□□□□□ -0.54
HLA-B-254ENST00000497377 IL10RBQ08334 325 aa11.65□□□□□ -0.54
HLA-B-254ENST00000497377 DPYSL3Q14195 570 aa11.65□□□□□ -0.54
HLA-B-254ENST00000497377 GRM3Q14832 879 aa11.65□□□□□ -0.54
HLA-B-254ENST00000497377 DUOXA1Q1HG43 343 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms