RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 CAMK1DQ8IU85 385 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 TICAM1Q8IUC6 712 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 PSTKQ8IV42 348 aaKnown RBP3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 CDKL3Q8IVW4 592 aaPredicted RBP3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 PHC2Q8IXK0 858 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 CCDC36Q8IYA8 594 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 MB21D2Q8IYB1 491 aaPredicted RBP3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 DIS3L2Q8IYB7 885 aaKnown RBP3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 PM20D2Q8IYS1 436 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 MPP5Q8N3R9 675 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 TCP11L2Q8N4U5 519 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 TTLL6Q8N841 843 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 FAM71BQ8TC56 605 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 ADAMTS16Q8TE57 1224 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 ATP2A3Q93084 1043 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 DCLK3Q9C098 648 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 ARHGAP39Q9C0H5 1083 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 LSG1Q9H089 658 aaKnown RBP3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 PALMDQ9NP74 551 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 GPR27Q9NS67 375 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 PKD2L2Q9NZM6 624 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 UXTQ9UBK9 157 aaPredicted RBP3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 CTNNAL1Q9UBT7 734 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 GMEB2Q9UKD1 530 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 SLC39A10Q9ULF5 831 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 SPATA2Q9UM82 520 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 CORO2BQ9UQ03 480 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 L3MBTL1Q9Y468 752 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 TNPO3Q9Y5L0 923 aaKnown RBP3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 NR2E3Q9Y5X4 410 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 WDR7Q9Y4E6 1490 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 A0A1B0GTQ1 180 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 A0A1W2PPL8 197 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 TTC26A0AVF1 554 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 DPPA5A6NC42 116 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 KRTAP9-7A8MTY7 169 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 KCNN4O15554 427 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 RRP8O43159 456 aaKnown RBP3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 SLC25A17O43808 307 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 KRT75O95678 551 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 LRG1P02750 347 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 CSTBP04080 98 aaKnown RBP3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 TUBB4AP04350 444 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 ADRB2P07550 413 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 FGF4P08620 206 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 RPS17P08708 135 aaKnown RBP3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 SLC9A1P19634 815 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 PTX3P26022 381 aaPredicted RBP3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 PEX2P28328 305 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 STAT5BP51692 787 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 MFAP3P55082 362 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 PSMC5P62195 406 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 ASIC1P78348 528 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 IFI35P80217 286 aaPredicted RBP3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 LACTBP83111 547 aaPredicted RBP3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 HPCAP84074 193 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 LIPEQ05469 1076 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 TUSC3Q13454 348 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 CUL4AQ13619 759 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 LPIN1Q14693 890 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 TSC22D1Q15714 1073 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 CMPK2Q5EBM0 449 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 SAPCD1Q5SSQ6 148 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 JMJD6Q6NYC1 403 aaPredicted RBP3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 CASC4Q6P4E1 433 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 IL27RAQ6UWB1 636 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 ZNF783Q6ZMS7 281 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 IDO2Q6ZQW0 420 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 TRPM8Q7Z2W7 1104 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 TMPRSS9Q7Z410 1059 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 ITIH5Q86UX2 942 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 FJX1Q86VR8 437 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 CHD1LQ86WJ1 897 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 MCEMP1Q8IX19 187 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 CMTR2Q8IYT2 770 aaKnown RBP3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 SYCE1Q8N0S2 351 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 IGSF22Q8N9C0 903 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 FAM133AQ8N9E0 248 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 ATG16L2Q8NAA4 619 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 KCTD6Q8NC69 237 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 CNNM3Q8NE01 707 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 NLGN2Q8NFZ4 835 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 ZNF461Q8TAF7 563 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 LRRC8CQ8TDW0 803 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 SLC44A1Q8WWI5 657 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 SLC5A11Q8WWX8 675 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 TANKQ92844 425 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 LPPQ93052 612 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 KISS1RQ969F8 398 aaPredicted RBP3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 IQCDQ96DY2 449 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 RMND5BQ96G75 393 aaPredicted RBP3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 USP28Q96RU2 1077 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 TREX2Q9BQ50 279 aaPredicted RBP3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 NUP58Q9BVL2 599 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 NUP85Q9BW27 656 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 GPR61Q9BZJ8 451 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 C6orf62Q9GZU0 229 aaPredicted RBP3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 MTFR1LQ9H019 292 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 TMEM245Q9H330 911 aa3.17□□□□□ -1.9
SNRNP48-202ENST00000496946 EPS8L2Q9H6S3 715 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms