RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 OR52N4Q8NGI2 321 aa4.03□□□□□ -1.76
CLK1-214ENST00000496205 KAT2AQ92830 837 aa4.03□□□□□ -1.76
CLK1-214ENST00000496205 MAP4K1Q92918 833 aa4.03□□□□□ -1.76
CLK1-214ENST00000496205 THOC3Q96J01 351 aaKnown RBP4.03□□□□□ -1.76
CLK1-214ENST00000496205 TMX4Q9H1E5 349 aaPredicted RBP4.03□□□□□ -1.76
CLK1-214ENST00000496205 SLC32A1Q9H598 525 aa4.03□□□□□ -1.76
CLK1-214ENST00000496205 EPHX3Q9H6B9 360 aa4.03□□□□□ -1.76
CLK1-214ENST00000496205 PCDHB16Q9NRJ7 776 aa4.03□□□□□ -1.76
CLK1-214ENST00000496205 BEX4Q9NWD9 120 aaPredicted RBP4.03□□□□□ -1.76
CLK1-214ENST00000496205 TFCP2L1Q9NZI6 479 aa4.03□□□□□ -1.76
CLK1-214ENST00000496205 NLKQ9UBE8 527 aa4.03□□□□□ -1.76
CLK1-214ENST00000496205 SLC25A13Q9UJS0 675 aa4.03□□□□□ -1.76
CLK1-214ENST00000496205 PIAS3Q9Y6X2 628 aa4.03□□□□□ -1.76
CLK1-214ENST00000496205 SPATA31A5Q5VU36 1347 aa4.02□□□□□ -1.77
CLK1-214ENST00000496205 ITIH6Q6UXX5 1313 aa4.02□□□□□ -1.77
CLK1-214ENST00000496205 SPATA31A7Q8IWB4 1347 aa4.02□□□□□ -1.77
CLK1-214ENST00000496205 SLC22A23A1A5C7 686 aa4.02□□□□□ -1.77
CLK1-214ENST00000496205 TARSL2A2RTX5 802 aaKnown RBP4.02□□□□□ -1.77
CLK1-214ENST00000496205 CXorf65A6NEN9 183 aa4.02□□□□□ -1.77
CLK1-214ENST00000496205 NPIPB15A6NHN6 443 aaPredicted RBP4.02□□□□□ -1.77
CLK1-214ENST00000496205 TTC34A8MYJ7 566 aa4.02□□□□□ -1.77
CLK1-214ENST00000496205 B4DGG1 531 aa4.02□□□□□ -1.77
CLK1-214ENST00000496205 MLYCDO95822 493 aa4.02□□□□□ -1.77
CLK1-214ENST00000496205 WNT1P04628 370 aa4.02□□□□□ -1.77
CLK1-214ENST00000496205 ENO1P06733 434 aaKnown RBP4.02□□□□□ -1.77
CLK1-214ENST00000496205 TNNT1P13805 278 aa4.02□□□□□ -1.77
CLK1-214ENST00000496205 EDN2P20800 178 aa4.02□□□□□ -1.77
CLK1-214ENST00000496205 MT3P25713 68 aa4.02□□□□□ -1.77
CLK1-214ENST00000496205 GJC1P36383 396 aa4.02□□□□□ -1.77
CLK1-214ENST00000496205 ME1P48163 572 aa4.02□□□□□ -1.77
CLK1-214ENST00000496205 CDH15P55291 814 aa4.02□□□□□ -1.77
CLK1-214ENST00000496205 IRX6P78412 446 aaPredicted RBP4.02□□□□□ -1.77
CLK1-214ENST00000496205 CAMK1Q14012 370 aa4.02□□□□□ -1.77
CLK1-214ENST00000496205 SLC18A3Q16572 532 aa4.02□□□□□ -1.77
CLK1-214ENST00000496205 ANXA2RQ3ZCQ2 193 aa4.02□□□□□ -1.77
CLK1-214ENST00000496205 SLC9B1Q4ZJI4 515 aa4.02□□□□□ -1.77
CLK1-214ENST00000496205 ZNF585BQ52M93 769 aa4.02□□□□□ -1.77
CLK1-214ENST00000496205 KIAA1755Q5JYT7 1200 aa4.02□□□□□ -1.77
CLK1-214ENST00000496205 CC2D1BQ5T0F9 858 aaKnown RBP4.02□□□□□ -1.77
CLK1-214ENST00000496205 SNX30Q5VWJ9 437 aa4.02□□□□□ -1.77
CLK1-214ENST00000496205 MZT2BQ6NZ67 158 aa4.02□□□□□ -1.77
CLK1-214ENST00000496205 CFAP161Q6P656 301 aa4.02□□□□□ -1.77
CLK1-214ENST00000496205 ZNF549Q6P9A3 640 aa4.02□□□□□ -1.77
CLK1-214ENST00000496205 C16orf54Q6UWD8 224 aa4.02□□□□□ -1.77
CLK1-214ENST00000496205 VSTM1Q6UX27 236 aa4.02□□□□□ -1.77
CLK1-214ENST00000496205 C17orf99Q6UX52 265 aa4.02□□□□□ -1.77
CLK1-214ENST00000496205 RBM44Q6ZP01 1051 aaKnown RBP4.02□□□□□ -1.77
CLK1-214ENST00000496205 NEK10Q6ZWH5 1172 aa4.02□□□□□ -1.77
CLK1-214ENST00000496205 ARMC8Q8IUR7 673 aa4.02□□□□□ -1.77
CLK1-214ENST00000496205 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.02□□□□□ -1.77
CLK1-214ENST00000496205 TMTC2Q8N394 836 aa4.02□□□□□ -1.77
CLK1-214ENST00000496205 PAQR4Q8N4S7 273 aaPredicted RBP4.02□□□□□ -1.77
CLK1-214ENST00000496205 ARL14EPQ8N8R7 260 aaPredicted RBP4.02□□□□□ -1.77
CLK1-214ENST00000496205 SCAIQ8N9R8 606 aa4.02□□□□□ -1.77
CLK1-214ENST00000496205 ADPRHL1Q8NDY3 354 aa4.02□□□□□ -1.77
CLK1-214ENST00000496205 NFKBIDQ8NI38 313 aa4.02□□□□□ -1.77
CLK1-214ENST00000496205 OSR1Q8TAX0 266 aaPredicted RBP4.02□□□□□ -1.77
CLK1-214ENST00000496205 METTL6Q8TCB7 284 aa4.02□□□□□ -1.77
CLK1-214ENST00000496205 ZFPM2Q8WW38 1151 aa4.02□□□□□ -1.77
CLK1-214ENST00000496205 RAB40AQ8WXH6 277 aa4.02□□□□□ -1.77
CLK1-214ENST00000496205 HEMGNQ9BXL5 484 aa4.02□□□□□ -1.77
CLK1-214ENST00000496205 FAM234AQ9H0X4 552 aa4.02□□□□□ -1.77
CLK1-214ENST00000496205 CXorf56Q9H5V9 222 aa4.02□□□□□ -1.77
CLK1-214ENST00000496205 TBC1D22BQ9NU19 505 aa4.02□□□□□ -1.77
CLK1-214ENST00000496205 ARL8BQ9NVJ2 186 aa4.02□□□□□ -1.77
CLK1-214ENST00000496205 HSPB7Q9UBY9 170 aa4.02□□□□□ -1.77
CLK1-214ENST00000496205 SARDHQ9UL12 918 aa4.02□□□□□ -1.77
CLK1-214ENST00000496205 A0A1W2PQM1 296 aa4.01□□□□□ -1.77
CLK1-214ENST00000496205 DYTNA2CJ06 578 aa4.01□□□□□ -1.77
CLK1-214ENST00000496205 C4orf47A7E2U8 309 aa4.01□□□□□ -1.77
CLK1-214ENST00000496205 F5H0A9 414 aaPredicted RBP4.01□□□□□ -1.77
CLK1-214ENST00000496205 DOK2O60496 412 aa4.01□□□□□ -1.77
CLK1-214ENST00000496205 USP12O75317 370 aa4.01□□□□□ -1.77
CLK1-214ENST00000496205 GFPT2O94808 682 aa4.01□□□□□ -1.77
CLK1-214ENST00000496205 TMEM63AO94886 807 aa4.01□□□□□ -1.77
CLK1-214ENST00000496205 DDX58O95786 925 aaKnown RBP4.01□□□□□ -1.77
CLK1-214ENST00000496205 HOXB9P17482 250 aaPredicted RBP4.01□□□□□ -1.77
CLK1-214ENST00000496205 GSTM2P28161 218 aa4.01□□□□□ -1.77
CLK1-214ENST00000496205 POLD2P49005 469 aa4.01□□□□□ -1.77
CLK1-214ENST00000496205 FAM205BPQ63HN1 556 aa4.01□□□□□ -1.77
CLK1-214ENST00000496205 DEF8Q6ZN54 512 aa4.01□□□□□ -1.77
CLK1-214ENST00000496205 COLCA1Q6ZS62 124 aa4.01□□□□□ -1.77
CLK1-214ENST00000496205 TMTC3Q6ZXV5 915 aa4.01□□□□□ -1.77
CLK1-214ENST00000496205 TRIM74Q86UV6 250 aa4.01□□□□□ -1.77
CLK1-214ENST00000496205 TRIM73Q86UV7 250 aa4.01□□□□□ -1.77
CLK1-214ENST00000496205 PIM3Q86V86 326 aa4.01□□□□□ -1.77
CLK1-214ENST00000496205 DCP1BQ8IZD4 617 aaKnown RBP4.01□□□□□ -1.77
CLK1-214ENST00000496205 CREB3L4Q8TEY5 395 aa4.01□□□□□ -1.77
CLK1-214ENST00000496205 WIPF2Q8TF74 440 aaPredicted RBP4.01□□□□□ -1.77
CLK1-214ENST00000496205 CNOT9Q92600 299 aaKnown RBP4.01□□□□□ -1.77
CLK1-214ENST00000496205 SH3KBP1Q96B97 665 aa4.01□□□□□ -1.77
CLK1-214ENST00000496205 NR1H4Q96RI1 486 aaPredicted RBP4.01□□□□□ -1.77
CLK1-214ENST00000496205 CENPOQ9BU64 300 aa4.01□□□□□ -1.77
CLK1-214ENST00000496205 ITPAQ9BY32 194 aa4.01□□□□□ -1.77
CLK1-214ENST00000496205 GLIS2Q9BZE0 524 aaPredicted RBP4.01□□□□□ -1.77
CLK1-214ENST00000496205 TRIM2Q9C040 744 aa4.01□□□□□ -1.77
CLK1-214ENST00000496205 SLCO5A1Q9H2Y9 848 aa4.01□□□□□ -1.77
CLK1-214ENST00000496205 TTC12Q9H892 705 aaPredicted RBP4.01□□□□□ -1.77
CLK1-214ENST00000496205 PLEKHA5Q9HAU0 1116 aa4.01□□□□□ -1.77
CLK1-214ENST00000496205 ALKBH4Q9NXW9 302 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms