RNA–Protein interactions for RNA: ENST00000495805.5

PSMB4-207, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 811 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-207ENST00000495805 DMXL1Q9Y485 3027 aa13.74□□□□□ -0.21
PSMB4-207ENST00000495805 FAM47DPA6NHR8 397 aa13.73□□□□□ -0.21
PSMB4-207ENST00000495805 SPOPO43791 374 aa13.73□□□□□ -0.21
PSMB4-207ENST00000495805 ZNF821O75541 412 aaPredicted RBP13.73□□□□□ -0.21
PSMB4-207ENST00000495805 PALMO75781 387 aa13.73□□□□□ -0.21
PSMB4-207ENST00000495805 TMCC1O94876 653 aa13.73□□□□□ -0.21
PSMB4-207ENST00000495805 POP4O95707 220 aaKnown RBP13.73□□□□□ -0.21
PSMB4-207ENST00000495805 CD160O95971 181 aa13.73□□□□□ -0.21
PSMB4-207ENST00000495805 IGSF6O95976 241 aa13.73□□□□□ -0.21
PSMB4-207ENST00000495805 CCNHP51946 323 aaPredicted RBP13.73□□□□□ -0.21
PSMB4-207ENST00000495805 TAS2R40P59535 323 aa13.73□□□□□ -0.21
PSMB4-207ENST00000495805 RHOAP61586 193 aa13.73□□□□□ -0.21
PSMB4-207ENST00000495805 IL10RBQ08334 325 aa13.73□□□□□ -0.21
PSMB4-207ENST00000495805 DPYSL3Q14195 570 aa13.73□□□□□ -0.21
PSMB4-207ENST00000495805 RFTN1Q14699 578 aaPredicted RBP13.73□□□□□ -0.21
PSMB4-207ENST00000495805 TMCO4Q5TGY1 634 aa13.73□□□□□ -0.21
PSMB4-207ENST00000495805 LRRC38Q5VT99 294 aa13.73□□□□□ -0.21
PSMB4-207ENST00000495805 DCAF12L1Q5VU92 463 aa13.73□□□□□ -0.21
PSMB4-207ENST00000495805 PEAR1Q5VY43 1037 aaPredicted RBP13.73□□□□□ -0.21
PSMB4-207ENST00000495805 LRRC49Q8IUZ0 686 aa13.73□□□□□ -0.21
PSMB4-207ENST00000495805 RHOT1Q8IXI2 618 aa13.73□□□□□ -0.21
PSMB4-207ENST00000495805 CHST14Q8NCH0 376 aa13.73□□□□□ -0.21
PSMB4-207ENST00000495805 GRIN3AQ8TCU5 1115 aa13.73□□□□□ -0.21
PSMB4-207ENST00000495805 NSMCE1Q8WV22 266 aa13.73□□□□□ -0.21
PSMB4-207ENST00000495805 DNASE2BQ8WZ79 361 aa13.73□□□□□ -0.21
PSMB4-207ENST00000495805 OSBPL1AQ9BXW6 950 aa13.73□□□□□ -0.21
PSMB4-207ENST00000495805 TM6SF2Q9BZW4 377 aa13.73□□□□□ -0.21
PSMB4-207ENST00000495805 KLC2Q9H0B6 622 aa13.73□□□□□ -0.21
PSMB4-207ENST00000495805 C6orf106Q9H6K1 298 aaPredicted RBP13.73□□□□□ -0.21
PSMB4-207ENST00000495805 ZDHHC6Q9H6R6 413 aa13.73□□□□□ -0.21
PSMB4-207ENST00000495805 DDX56Q9NY93 547 aaKnown RBP13.73□□□□□ -0.21
PSMB4-207ENST00000495805 ABCA7Q8IZY2 2146 aa13.73□□□□□ -0.21
PSMB4-207ENST00000495805 TBC1D3DA0A087WVF3 549 aa13.72□□□□□ -0.21
PSMB4-207ENST00000495805 TBC1D3IA0A087WXS9 549 aa13.72□□□□□ -0.21
PSMB4-207ENST00000495805 TBC1D3EA0A087X179 549 aa13.72□□□□□ -0.21
PSMB4-207ENST00000495805 TBC1D3KA0A087X1G2 549 aa13.72□□□□□ -0.21
PSMB4-207ENST00000495805 TBC1D3FA6NER0 549 aaPredicted RBP13.72□□□□□ -0.21
PSMB4-207ENST00000495805 TBC1D3LB9A6J9 549 aa13.72□□□□□ -0.21
PSMB4-207ENST00000495805 J3KR12 359 aa13.72□□□□□ -0.21
PSMB4-207ENST00000495805 KRIT1O00522 736 aa13.72□□□□□ -0.21
PSMB4-207ENST00000495805 LEFTY1O75610 366 aa13.72□□□□□ -0.21
PSMB4-207ENST00000495805 FSBPO95073 299 aa13.72□□□□□ -0.21
PSMB4-207ENST00000495805 CFIP05156 583 aa13.72□□□□□ -0.21
PSMB4-207ENST00000495805 CTSLP07711 333 aa13.72□□□□□ -0.21
PSMB4-207ENST00000495805 SERPINF2P08697 491 aa13.72□□□□□ -0.21
PSMB4-207ENST00000495805 TBC1D3HP0C7X1 549 aa13.72□□□□□ -0.21
PSMB4-207ENST00000495805 DRD3P35462 400 aa13.72□□□□□ -0.21
PSMB4-207ENST00000495805 ARSEP51690 589 aa13.72□□□□□ -0.21
PSMB4-207ENST00000495805 CNTN1Q12860 1018 aa13.72□□□□□ -0.21
PSMB4-207ENST00000495805 GRM3Q14832 879 aa13.72□□□□□ -0.21
PSMB4-207ENST00000495805 SF3A2Q15428 464 aaKnown RBP13.72□□□□□ -0.21
PSMB4-207ENST00000495805 MYLK3Q32MK0 819 aa13.72□□□□□ -0.21
PSMB4-207ENST00000495805 POM121L1PQ3SYA9 428 aa13.72□□□□□ -0.21
PSMB4-207ENST00000495805 ATP13A4Q4VNC1 1196 aa13.72□□□□□ -0.21
PSMB4-207ENST00000495805 ANKRD20A8PQ5CZ79 823 aa13.72□□□□□ -0.21
PSMB4-207ENST00000495805 TRIM61Q5EBN2 209 aa13.72□□□□□ -0.21
PSMB4-207ENST00000495805 TBC1D3GQ6DHY5 549 aa13.72□□□□□ -0.21
PSMB4-207ENST00000495805 TBC1D3CQ6IPX1 549 aa13.72□□□□□ -0.21
PSMB4-207ENST00000495805 SLC23A3Q6PIS1 610 aa13.72□□□□□ -0.21
PSMB4-207ENST00000495805 NCEH1Q6PIU2 408 aa13.72□□□□□ -0.21
PSMB4-207ENST00000495805 KIAA1328Q86T90 577 aa13.72□□□□□ -0.21
PSMB4-207ENST00000495805 ARHGAP12Q8IWW6 846 aa13.72□□□□□ -0.21
PSMB4-207ENST00000495805 TBC1D3Q8IZP1 549 aaPredicted RBP13.72□□□□□ -0.21
PSMB4-207ENST00000495805 SNX19Q92543 992 aa13.72□□□□□ -0.21
PSMB4-207ENST00000495805 ZNF599Q96NL3 588 aa13.72□□□□□ -0.21
PSMB4-207ENST00000495805 MAK16Q9BXY0 300 aaKnown RBP13.72□□□□□ -0.21
PSMB4-207ENST00000495805 HDAC8Q9BY41 377 aa13.72□□□□□ -0.21
PSMB4-207ENST00000495805 MIR1-1HGQ9H1L0 117 aa13.72□□□□□ -0.21
PSMB4-207ENST00000495805 TMEM74BQ9NUR3 256 aa13.72□□□□□ -0.21
PSMB4-207ENST00000495805 SERGEFQ9UGK8 458 aa13.72□□□□□ -0.21
PSMB4-207ENST00000495805 IPO11Q9UI26 975 aaKnown RBP13.72□□□□□ -0.21
PSMB4-207ENST00000495805 SLC6A14Q9UN76 642 aa13.72□□□□□ -0.21
PSMB4-207ENST00000495805 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.72□□□□□ -0.21
PSMB4-207ENST00000495805 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.72□□□□□ -0.21
PSMB4-207ENST00000495805 ACTL7AQ9Y615 435 aa13.72□□□□□ -0.21
PSMB4-207ENST00000495805 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.72□□□□□ -0.21
PSMB4-207ENST00000495805 SDK1Q7Z5N4 2213 aa13.72□□□□□ -0.21
PSMB4-207ENST00000495805 ATXN2Q99700 1313 aaKnown RBP13.71□□□□□ -0.21
PSMB4-207ENST00000495805 A0A1B0GTW7 788 aa13.71□□□□□ -0.21
PSMB4-207ENST00000495805 LRRD1A4D1F6 860 aa13.71□□□□□ -0.21
PSMB4-207ENST00000495805 ZNF487B1APH4 448 aa13.71□□□□□ -0.21
PSMB4-207ENST00000495805 SYPP08247 313 aa13.71□□□□□ -0.21
PSMB4-207ENST00000495805 CD48P09326 243 aa13.71□□□□□ -0.21
PSMB4-207ENST00000495805 KDELR1P24390 212 aa13.71□□□□□ -0.21
PSMB4-207ENST00000495805 IL4RP24394 825 aa13.71□□□□□ -0.21
PSMB4-207ENST00000495805 ITGB7P26010 798 aa13.71□□□□□ -0.21
PSMB4-207ENST00000495805 CD27P26842 260 aa13.71□□□□□ -0.21
PSMB4-207ENST00000495805 NUDT1P36639 197 aa13.71□□□□□ -0.21
PSMB4-207ENST00000495805 RENBPP51606 427 aa13.71□□□□□ -0.21
PSMB4-207ENST00000495805 CCR5P51681 352 aa13.71□□□□□ -0.21
PSMB4-207ENST00000495805 ADPRHP54922 357 aa13.71□□□□□ -0.21
PSMB4-207ENST00000495805 NAP1L1P55209 391 aaKnown RBP13.71□□□□□ -0.21
PSMB4-207ENST00000495805 MMRN1Q13201 1228 aa13.71□□□□□ -0.21
PSMB4-207ENST00000495805 IFI16Q16666 785 aaKnown RBP13.71□□□□□ -0.21
PSMB4-207ENST00000495805 KIAA0895LQ68EN5 471 aa13.71□□□□□ -0.21
PSMB4-207ENST00000495805 NEK5Q6P3R8 708 aa13.71□□□□□ -0.21
PSMB4-207ENST00000495805 FBXL19Q6PCT2 694 aa13.71□□□□□ -0.21
PSMB4-207ENST00000495805 RAD9BQ6WBX8 426 aa13.71□□□□□ -0.21
PSMB4-207ENST00000495805 ERN2Q76MJ5 926 aaKnown RBP13.71□□□□□ -0.21
PSMB4-207ENST00000495805 VSIG1Q86XK7 387 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms