RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 ATP13A4Q4VNC1 1196 aa16.22■□□□□ 0.19
LIME1-209ENST00000494776 INO80DQ53TQ3 878 aaPredicted RBP16.22■□□□□ 0.19
LIME1-209ENST00000494776 ODF2Q5BJF6 829 aa16.22■□□□□ 0.19
LIME1-209ENST00000494776 NCEH1Q6PIU2 408 aa16.22■□□□□ 0.19
LIME1-209ENST00000494776 CPNE8Q86YQ8 564 aa16.22■□□□□ 0.19
LIME1-209ENST00000494776 NETO2Q8NC67 525 aa16.22■□□□□ 0.19
LIME1-209ENST00000494776 OR2T34Q8NGX1 318 aa16.22■□□□□ 0.19
LIME1-209ENST00000494776 SP110Q9HB58 689 aa16.22■□□□□ 0.19
LIME1-209ENST00000494776 EIF2B4Q9UI10 523 aaKnown RBP16.22■□□□□ 0.19
LIME1-209ENST00000494776 CDV3Q9UKY7 258 aaKnown RBP16.22■□□□□ 0.19
LIME1-209ENST00000494776 RALGAPA1Q6GYQ0 2036 aa16.22■□□□□ 0.19
LIME1-209ENST00000494776 TBC1D3DA0A087WVF3 549 aa16.21■□□□□ 0.19
LIME1-209ENST00000494776 TBC1D3IA0A087WXS9 549 aa16.21■□□□□ 0.19
LIME1-209ENST00000494776 TBC1D3EA0A087X179 549 aa16.21■□□□□ 0.19
LIME1-209ENST00000494776 TBC1D3KA0A087X1G2 549 aa16.21■□□□□ 0.19
LIME1-209ENST00000494776 TBC1D3FA6NER0 549 aaPredicted RBP16.21■□□□□ 0.19
LIME1-209ENST00000494776 TBC1D3LB9A6J9 549 aa16.21■□□□□ 0.19
LIME1-209ENST00000494776 J3KR12 359 aa16.21■□□□□ 0.19
LIME1-209ENST00000494776 KRIT1O00522 736 aa16.21■□□□□ 0.19
LIME1-209ENST00000494776 LEFTY1O75610 366 aa16.21■□□□□ 0.19
LIME1-209ENST00000494776 MTA2O94776 668 aa16.21■□□□□ 0.19
LIME1-209ENST00000494776 NDUFA10O95299 355 aa16.21■□□□□ 0.19
LIME1-209ENST00000494776 LCA5LO95447 670 aa16.21■□□□□ 0.19
LIME1-209ENST00000494776 GSRP00390 522 aa16.21■□□□□ 0.19
LIME1-209ENST00000494776 TBC1D3HP0C7X1 549 aa16.21■□□□□ 0.19
LIME1-209ENST00000494776 SDHBP21912 280 aa16.21■□□□□ 0.19
LIME1-209ENST00000494776 SERPINB6P35237 376 aa16.21■□□□□ 0.19
LIME1-209ENST00000494776 DRD3P35462 400 aa16.21■□□□□ 0.19
LIME1-209ENST00000494776 METAP1P53582 386 aa16.21■□□□□ 0.19
LIME1-209ENST00000494776 IRX4P78413 519 aa16.21■□□□□ 0.19
LIME1-209ENST00000494776 RAD51Q06609 339 aa16.21■□□□□ 0.19
LIME1-209ENST00000494776 CNTN1Q12860 1018 aa16.21■□□□□ 0.19
LIME1-209ENST00000494776 PDK2Q15119 407 aa16.21■□□□□ 0.19
LIME1-209ENST00000494776 RSPO4Q2I0M5 234 aaPredicted RBP16.21■□□□□ 0.19
LIME1-209ENST00000494776 KIAA0895LQ68EN5 471 aa16.21■□□□□ 0.19
LIME1-209ENST00000494776 TBC1D3GQ6DHY5 549 aa16.21■□□□□ 0.19
LIME1-209ENST00000494776 TBC1D3CQ6IPX1 549 aa16.21■□□□□ 0.19
LIME1-209ENST00000494776 ERMP1Q7Z2K6 904 aa16.21■□□□□ 0.19
LIME1-209ENST00000494776 PLPP6Q8IY26 295 aa16.21■□□□□ 0.19
LIME1-209ENST00000494776 TBC1D3Q8IZP1 549 aaPredicted RBP16.21■□□□□ 0.19
LIME1-209ENST00000494776 NPWQ8N729 165 aa16.21■□□□□ 0.19
LIME1-209ENST00000494776 OR2AP1Q8NGE2 309 aa16.21■□□□□ 0.19
LIME1-209ENST00000494776 GDAP1L1Q96MZ0 367 aa16.21■□□□□ 0.19
LIME1-209ENST00000494776 BAG1Q99933 345 aaPredicted RBP16.21■□□□□ 0.19
LIME1-209ENST00000494776 KLHL11Q9NVR0 708 aa16.21■□□□□ 0.19
LIME1-209ENST00000494776 RCOR3Q9P2K3 495 aaPredicted RBP16.21■□□□□ 0.19
LIME1-209ENST00000494776 EVLQ9UI08 416 aaPredicted RBP16.21■□□□□ 0.19
LIME1-209ENST00000494776 SLC6A14Q9UN76 642 aa16.21■□□□□ 0.19
LIME1-209ENST00000494776 FRYLO94915 3013 aa16.2■□□□□ 0.18
LIME1-209ENST00000494776 CEP192Q8TEP8 1941 aa16.2■□□□□ 0.18
LIME1-209ENST00000494776 SLC7A4O43246 635 aa16.2■□□□□ 0.18
LIME1-209ENST00000494776 SPOPO43791 374 aa16.2■□□□□ 0.18
LIME1-209ENST00000494776 GDF9O60383 454 aa16.2■□□□□ 0.18
LIME1-209ENST00000494776 PRAMEF11O60813 436 aa16.2■□□□□ 0.18
LIME1-209ENST00000494776 PALMO75781 387 aa16.2■□□□□ 0.18
LIME1-209ENST00000494776 POP4O95707 220 aaKnown RBP16.2■□□□□ 0.18
LIME1-209ENST00000494776 IGSF6O95976 241 aa16.2■□□□□ 0.18
LIME1-209ENST00000494776 SERPINF2P08697 491 aa16.2■□□□□ 0.18
LIME1-209ENST00000494776 CD48P09326 243 aa16.2■□□□□ 0.18
LIME1-209ENST00000494776 TNNT1P13805 278 aa16.2■□□□□ 0.18
LIME1-209ENST00000494776 ATXN3P54252 364 aaPredicted RBP16.2■□□□□ 0.18
LIME1-209ENST00000494776 ADPRHP54922 357 aa16.2■□□□□ 0.18
LIME1-209ENST00000494776 MMRN1Q13201 1228 aa16.2■□□□□ 0.18
LIME1-209ENST00000494776 MYLK3Q32MK0 819 aa16.2■□□□□ 0.18
LIME1-209ENST00000494776 ATXN7L2Q5T6C5 722 aaPredicted RBP16.2■□□□□ 0.18
LIME1-209ENST00000494776 PEAR1Q5VY43 1037 aaPredicted RBP16.2■□□□□ 0.18
LIME1-209ENST00000494776 AFMIDQ63HM1 303 aa16.2■□□□□ 0.18
LIME1-209ENST00000494776 SLC23A3Q6PIS1 610 aa16.2■□□□□ 0.18
LIME1-209ENST00000494776 ARHGAP12Q8IWW6 846 aa16.2■□□□□ 0.18
LIME1-209ENST00000494776 ZCCHC9Q8N567 271 aaKnown RBP16.2■□□□□ 0.18
LIME1-209ENST00000494776 OR6K2Q8NGY2 324 aa16.2■□□□□ 0.18
LIME1-209ENST00000494776 NETO1Q8TDF5 533 aa16.2■□□□□ 0.18
LIME1-209ENST00000494776 DNASE2BQ8WZ79 361 aa16.2■□□□□ 0.18
LIME1-209ENST00000494776 BIRC7Q96CA5 298 aa16.2■□□□□ 0.18
LIME1-209ENST00000494776 EDEM2Q9BV94 578 aa16.2■□□□□ 0.18
LIME1-209ENST00000494776 ETNK2Q9NVF9 386 aa16.2■□□□□ 0.18
LIME1-209ENST00000494776 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.2■□□□□ 0.18
LIME1-209ENST00000494776 MFHAS1Q9Y4C4 1052 aa16.2■□□□□ 0.18
LIME1-209ENST00000494776 WASF2Q9Y6W5 498 aa16.2■□□□□ 0.18
LIME1-209ENST00000494776 ZNF292O60281 2723 aa16.19■□□□□ 0.18
LIME1-209ENST00000494776 WDR87Q6ZQQ6 2873 aa16.19■□□□□ 0.18
LIME1-209ENST00000494776 NYNRINQ9P2P1 1898 aaKnown RBP16.19■□□□□ 0.18
LIME1-209ENST00000494776 A0A1B0GTW7 788 aa16.19■□□□□ 0.18
LIME1-209ENST00000494776 BCAT2O15382 392 aaPredicted RBP16.19■□□□□ 0.18
LIME1-209ENST00000494776 FECHP22830 423 aa16.19■□□□□ 0.18
LIME1-209ENST00000494776 GKP32189 559 aa16.19■□□□□ 0.18
LIME1-209ENST00000494776 SLC1A1P43005 524 aa16.19■□□□□ 0.18
LIME1-209ENST00000494776 NAP1L1P55209 391 aaKnown RBP16.19■□□□□ 0.18
LIME1-209ENST00000494776 DPYSL3Q14195 570 aa16.19■□□□□ 0.18
LIME1-209ENST00000494776 TCEAL1Q15170 157 aa16.19■□□□□ 0.18
LIME1-209ENST00000494776 TSC1Q92574 1164 aa16.19■□□□□ 0.18
LIME1-209ENST00000494776 ARRDC3Q96B67 414 aa16.19■□□□□ 0.18
LIME1-209ENST00000494776 LRIG1Q96JA1 1093 aa16.19■□□□□ 0.18
LIME1-209ENST00000494776 ZNF670Q9BS34 389 aa16.19■□□□□ 0.18
LIME1-209ENST00000494776 CINPQ9BW66 212 aaPredicted RBP16.19■□□□□ 0.18
LIME1-209ENST00000494776 KDM4CQ9H3R0 1056 aa16.19■□□□□ 0.18
LIME1-209ENST00000494776 RXFP3Q9NSD7 469 aa16.19■□□□□ 0.18
LIME1-209ENST00000494776 IPO11Q9UI26 975 aaKnown RBP16.19■□□□□ 0.18
LIME1-209ENST00000494776 NUP205Q92621 2012 aa16.19■□□□□ 0.18
LIME1-209ENST00000494776 LNP1A1A4G5 178 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms