RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 CYTH1Q15438 398 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 DUSP6Q16828 381 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 ANKRD20A4Q4UJ75 823 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 RALGPS1Q5JS13 557 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 SPANXN3Q5MJ09 141 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 PLPP4Q5VZY2 271 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 MARK2Q7KZI7 788 aaKnown RBP6.9□□□□□ -1.3
MSH5-217ENST00000494458 TAOK1Q7L7X3 1001 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 TFAP2DQ7Z6R9 452 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 SLC26A11Q86WA9 606 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 LRRC6Q86X45 466 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 CNTN4Q8IWV2 1026 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 CMTM8Q8IZV2 173 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 CFAP52Q8N1V2 620 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 ELMOD1Q8N336 334 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 TAB3Q8N5C8 712 aaPredicted RBP6.9□□□□□ -1.3
MSH5-217ENST00000494458 HJURPQ8NCD3 748 aaPredicted RBP6.9□□□□□ -1.3
MSH5-217ENST00000494458 OR52K1Q8NGK4 314 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 SPATA22Q8NHS9 363 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 FIBINQ8TAL6 211 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 UHMK1Q8TAS1 419 aaKnown RBP6.9□□□□□ -1.3
MSH5-217ENST00000494458 ATXN2LQ8WWM7 1075 aaKnown RBP6.9□□□□□ -1.3
MSH5-217ENST00000494458 TMA16Q96EY4 203 aaKnown RBP6.9□□□□□ -1.3
MSH5-217ENST00000494458 NSMCE3Q96MG7 304 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 FCRL3Q96P31 734 aaPredicted RBP6.9□□□□□ -1.3
MSH5-217ENST00000494458 TRIB3Q96RU7 358 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 PAFAH2Q99487 392 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 CDCA3Q99618 268 aaPredicted RBP6.9□□□□□ -1.3
MSH5-217ENST00000494458 C19orf43Q9BQ61 176 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 FEM1AQ9BSK4 669 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 CAPS2Q9BXY5 557 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 VPS37BQ9H9H4 285 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 MAN1C1Q9NR34 630 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 ASAH2Q9NR71 780 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 TREX1Q9NSU2 369 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 SYBUQ9NX95 663 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 MKS1Q9NXB0 559 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 BFARQ9NZS9 450 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 SEPT10Q9P0V9 454 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 CHD7Q9P2D1 2997 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 CTNNAL1Q9UBT7 734 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 FBXO10Q9UK96 956 aa6.9□□□□□ -1.3
MSH5-217ENST00000494458 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.89□□□□□ -1.31
MSH5-217ENST00000494458 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.89□□□□□ -1.31
MSH5-217ENST00000494458 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.89□□□□□ -1.31
MSH5-217ENST00000494458 A0A1W2PRU2 124 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 TLDC2A0PJX2 215 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 MROH6A6NGR9 719 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 LPXNO60711 386 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 XYLBO75191 536 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 RFPL2O75678 378 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 LUC7L3O95232 432 aaKnown RBP6.89□□□□□ -1.31
MSH5-217ENST00000494458 MT-CYBP00156 380 aaPredicted RBP6.89□□□□□ -1.31
MSH5-217ENST00000494458 PRLP01236 227 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 POLBP06746 335 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 ATXN1LP0C7T5 689 aaKnown RBP6.89□□□□□ -1.31
MSH5-217ENST00000494458 DHRS4L1P0CG22 281 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 CREB1P16220 341 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 ADRA1DP25100 572 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 CNTFP26441 200 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 ARNTP27540 789 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 MSH2P43246 934 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 MAGEA12P43365 314 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 SLCO1A2P46721 670 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 CSNK1DP48730 415 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 OXCT1P55809 520 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 WNT3AP56704 352 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 ARF5P84085 180 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 CYP4F8P98187 520 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 ACVR1Q04771 509 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 SLC20A2Q08357 652 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 USP4Q13107 963 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 ZNF177Q13360 481 aaPredicted RBP6.89□□□□□ -1.31
MSH5-217ENST00000494458 GPM6BQ13491 265 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 OLIG2Q13516 323 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 SLC12A1Q13621 1099 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 SPARCL1Q14515 664 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 ZNF77Q15935 545 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 SLC5A9Q2M3M2 681 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 MPPE1Q53F39 396 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 FSCBQ5H9T9 825 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 PCID2Q5JVF3 399 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 HP1BP3Q5SSJ5 553 aaPredicted RBP6.89□□□□□ -1.31
MSH5-217ENST00000494458 SYCP2LQ5T4T6 812 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 PKN3Q6P5Z2 889 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 TRMT10BQ6PF06 316 aaKnown RBP6.89□□□□□ -1.31
MSH5-217ENST00000494458 RGS9BPQ6ZS82 235 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 GALNT7Q86SF2 657 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 CIR1Q86X95 450 aaPredicted RBP6.89□□□□□ -1.31
MSH5-217ENST00000494458 ADGRG2Q8IZP9 1017 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.89□□□□□ -1.31
MSH5-217ENST00000494458 MAB21L3Q8N8X9 362 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 BANPQ8N9N5 519 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 OR7D4Q8NG98 312 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 RIN3Q8TB24 985 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 USP13Q92995 863 aaPredicted RBP6.89□□□□□ -1.31
MSH5-217ENST00000494458 ACDQ96AP0 544 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 ALKBH8Q96BT7 664 aaKnown RBP6.89□□□□□ -1.31
MSH5-217ENST00000494458 OTUB2Q96DC9 234 aa6.89□□□□□ -1.31
MSH5-217ENST00000494458 MTBPQ96DY7 904 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms