RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 PLPPR4Q7Z2D5 763 aa19.38■□□□□ 0.69
COL27A1-207ENST00000494090 IQCKQ8N0W5 287 aa19.38■□□□□ 0.69
COL27A1-207ENST00000494090 OLFM1Q99784 485 aa19.38■□□□□ 0.69
COL27A1-207ENST00000494090 TPRKBQ9Y3C4 175 aa19.38■□□□□ 0.69
COL27A1-207ENST00000494090 LBPP18428 481 aa19.37■□□□□ 0.69
COL27A1-207ENST00000494090 PAICSP22234 425 aaKnown RBP19.37■□□□□ 0.69
COL27A1-207ENST00000494090 THOP1P52888 689 aa19.37■□□□□ 0.69
COL27A1-207ENST00000494090 KCNJ2P63252 427 aa19.37■□□□□ 0.69
COL27A1-207ENST00000494090 PPIDQ08752 370 aaKnown RBP19.37■□□□□ 0.69
COL27A1-207ENST00000494090 NAIF1Q69YI7 327 aaPredicted RBP19.37■□□□□ 0.69
COL27A1-207ENST00000494090 ITFG1Q8TB96 612 aa19.37■□□□□ 0.69
COL27A1-207ENST00000494090 CDT1Q9H211 546 aa19.37■□□□□ 0.69
COL27A1-207ENST00000494090 CLUHO75153 1309 aa19.37■□□□□ 0.69
COL27A1-207ENST00000494090 LYPLA2O95372 231 aa19.37■□□□□ 0.69
COL27A1-207ENST00000494090 CSH1P0DML2 217 aa19.37■□□□□ 0.69
COL27A1-207ENST00000494090 CSH2P0DML3 217 aa19.37■□□□□ 0.69
COL27A1-207ENST00000494090 RPL9P32969 192 aaKnown RBP19.37■□□□□ 0.69
COL27A1-207ENST00000494090 CLVS1Q8IUQ0 354 aaPredicted RBP19.37■□□□□ 0.69
COL27A1-207ENST00000494090 CERS5Q8N5B7 392 aa19.37■□□□□ 0.69
COL27A1-207ENST00000494090 STAG3L4Q8TBR4 150 aa19.37■□□□□ 0.69
COL27A1-207ENST00000494090 TRPC4APQ8TEL6 797 aa19.37■□□□□ 0.69
COL27A1-207ENST00000494090 MIEF2Q96C03 454 aa19.37■□□□□ 0.69
COL27A1-207ENST00000494090 ATAD3AQ9NVI7 634 aa19.37■□□□□ 0.69
COL27A1-207ENST00000494090 COX4I1P13073 169 aa19.37■□□□□ 0.69
COL27A1-207ENST00000494090 MAPK9P45984 424 aa19.37■□□□□ 0.69
COL27A1-207ENST00000494090 TAS2R40P59535 323 aa19.37■□□□□ 0.69
COL27A1-207ENST00000494090 WDR36Q8NI36 951 aaKnown RBP19.37■□□□□ 0.69
COL27A1-207ENST00000494090 ALG3Q92685 438 aa19.37■□□□□ 0.69
COL27A1-207ENST00000494090 MCCC1Q96RQ3 725 aaPredicted RBP19.37■□□□□ 0.69
COL27A1-207ENST00000494090 TMEM216Q9P0N5 145 aa19.37■□□□□ 0.69
COL27A1-207ENST00000494090 ANXA5P08758 320 aa19.37■□□□□ 0.69
COL27A1-207ENST00000494090 HSMCR30P0CW71 290 aa19.37■□□□□ 0.69
COL27A1-207ENST00000494090 ATP5F1P24539 256 aaPredicted RBP19.37■□□□□ 0.69
COL27A1-207ENST00000494090 PIK3R1P27986 724 aa19.37■□□□□ 0.69
COL27A1-207ENST00000494090 NAGLUP54802 743 aa19.37■□□□□ 0.69
COL27A1-207ENST00000494090 RPL7AP62424 266 aaKnown RBP19.37■□□□□ 0.69
COL27A1-207ENST00000494090 VGLL4Q14135 290 aa19.37■□□□□ 0.69
COL27A1-207ENST00000494090 LYPLAL1Q5VWZ2 237 aa19.37■□□□□ 0.69
COL27A1-207ENST00000494090 ANKRD52Q8NB46 1076 aa19.37■□□□□ 0.69
COL27A1-207ENST00000494090 UTP15Q8TED0 518 aaKnown RBP19.37■□□□□ 0.69
COL27A1-207ENST00000494090 RPRD1BQ9NQG5 326 aaKnown RBP19.37■□□□□ 0.69
COL27A1-207ENST00000494090 ARL15Q9NXU5 204 aa19.37■□□□□ 0.69
COL27A1-207ENST00000494090 LCA5LO95447 670 aa19.36■□□□□ 0.69
COL27A1-207ENST00000494090 ATP6V1C1P21283 382 aa19.36■□□□□ 0.69
COL27A1-207ENST00000494090 NTSP30990 170 aa19.36■□□□□ 0.69
COL27A1-207ENST00000494090 HK2P52789 917 aa19.36■□□□□ 0.69
COL27A1-207ENST00000494090 FAM187BQ17R55 369 aa19.36■□□□□ 0.69
COL27A1-207ENST00000494090 CYP20A1Q6UW02 462 aa19.36■□□□□ 0.69
COL27A1-207ENST00000494090 KRT73Q86Y46 540 aa19.36■□□□□ 0.69
COL27A1-207ENST00000494090 PROX1Q92786 737 aa19.36■□□□□ 0.69
COL27A1-207ENST00000494090 VAV3Q9UKW4 847 aa19.36■□□□□ 0.69
COL27A1-207ENST00000494090 C2CD2Q9Y426 696 aa19.36■□□□□ 0.69
COL27A1-207ENST00000494090 SPTLC1O15269 473 aa19.36■□□□□ 0.69
COL27A1-207ENST00000494090 HS6ST1O60243 411 aa19.36■□□□□ 0.69
COL27A1-207ENST00000494090 ITGB5P18084 799 aa19.36■□□□□ 0.69
COL27A1-207ENST00000494090 SLC25A3Q00325 362 aa19.36■□□□□ 0.69
COL27A1-207ENST00000494090 SQLEQ14534 574 aa19.36■□□□□ 0.69
COL27A1-207ENST00000494090 TYW3Q6IPR3 259 aaKnown RBP19.36■□□□□ 0.69
COL27A1-207ENST00000494090 OR5B17Q8NGF7 314 aa19.36■□□□□ 0.69
COL27A1-207ENST00000494090 MBOAT7Q96N66 472 aa19.36■□□□□ 0.69
COL27A1-207ENST00000494090 GNPTGQ9UJJ9 305 aa19.36■□□□□ 0.69
COL27A1-207ENST00000494090 PRDM4Q9UKN5 801 aa19.36■□□□□ 0.69
COL27A1-207ENST00000494090 TNFSF9P41273 254 aa19.36■□□□□ 0.69
COL27A1-207ENST00000494090 CRADDP78560 199 aa19.36■□□□□ 0.69
COL27A1-207ENST00000494090 INTS11Q5TA45 600 aaKnown RBP19.36■□□□□ 0.69
COL27A1-207ENST00000494090 VN1R5Q7Z5H4 357 aa19.36■□□□□ 0.69
COL27A1-207ENST00000494090 ZDHHC13Q8IUH4 622 aa19.36■□□□□ 0.69
COL27A1-207ENST00000494090 SYT12Q8IV01 421 aa19.36■□□□□ 0.69
COL27A1-207ENST00000494090 TMEM199Q8N511 208 aa19.36■□□□□ 0.69
COL27A1-207ENST00000494090 PPP1R14AQ96A00 147 aa19.36■□□□□ 0.69
COL27A1-207ENST00000494090 SLC39A8Q9C0K1 460 aa19.36■□□□□ 0.69
COL27A1-207ENST00000494090 KLHL25Q9H0H3 589 aa19.36■□□□□ 0.69
COL27A1-207ENST00000494090 PTPRHQ9HD43 1115 aa19.36■□□□□ 0.69
COL27A1-207ENST00000494090 C1QTNF3-AMACRE9PGA6 284 aa19.36■□□□□ 0.69
COL27A1-207ENST00000494090 BANF1O75531 89 aa19.36■□□□□ 0.69
COL27A1-207ENST00000494090 PTDSS1P48651 473 aaKnown RBP19.36■□□□□ 0.69
COL27A1-207ENST00000494090 CLCN5P51795 746 aa19.36■□□□□ 0.69
COL27A1-207ENST00000494090 TRABD2AQ86V40 505 aa19.36■□□□□ 0.69
COL27A1-207ENST00000494090 SLC41A1Q8IVJ1 513 aa19.36■□□□□ 0.69
COL27A1-207ENST00000494090 CXorf40AQ8TE69 158 aa19.36■□□□□ 0.69
COL27A1-207ENST00000494090 RORBQ92753 470 aa19.36■□□□□ 0.69
COL27A1-207ENST00000494090 ADI1Q9BV57 179 aa19.36■□□□□ 0.69
COL27A1-207ENST00000494090 FHDC1Q9C0D6 1143 aaPredicted RBP19.36■□□□□ 0.69
COL27A1-207ENST00000494090 SEMA6AQ9H2E6 1030 aa19.36■□□□□ 0.69
COL27A1-207ENST00000494090 PRKAG3Q9UGI9 489 aa19.36■□□□□ 0.69
COL27A1-207ENST00000494090 FBXL21Q9UKT6 434 aa19.36■□□□□ 0.69
COL27A1-207ENST00000494090 SPATA31C2B4DYI2 1134 aa19.35■□□□□ 0.69
COL27A1-207ENST00000494090 SGTAO43765 313 aa19.35■□□□□ 0.69
COL27A1-207ENST00000494090 ABCB1P08183 1280 aaPredicted RBP19.35■□□□□ 0.69
COL27A1-207ENST00000494090 WSCD1Q658N2 575 aa19.35■□□□□ 0.69
COL27A1-207ENST00000494090 CAMK1DQ8IU85 385 aa19.35■□□□□ 0.69
COL27A1-207ENST00000494090 PCDH20Q8N6Y1 951 aaKnown RBP19.35■□□□□ 0.69
COL27A1-207ENST00000494090 FAM45AQ8TCE6 357 aa19.35■□□□□ 0.69
COL27A1-207ENST00000494090 ROGDIQ9GZN7 287 aa19.35■□□□□ 0.69
COL27A1-207ENST00000494090 ANAPC2Q9UJX6 822 aa19.35■□□□□ 0.69
COL27A1-207ENST00000494090 ANKDD1BA6NHY2 528 aa19.35■□□□□ 0.69
COL27A1-207ENST00000494090 SERPINA6P08185 405 aa19.35■□□□□ 0.69
COL27A1-207ENST00000494090 SCNN1GP51170 649 aa19.35■□□□□ 0.69
COL27A1-207ENST00000494090 ITGA1P56199 1179 aa19.35■□□□□ 0.69
COL27A1-207ENST00000494090 CDC73Q6P1J9 531 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms