RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 PTPN9P43378 593 aa13.66□□□□□ -0.22
CTDSP1-212ENST00000494067 SERPINH1P50454 418 aaKnown RBP13.66□□□□□ -0.22
CTDSP1-212ENST00000494067 NEK3P51956 506 aa13.66□□□□□ -0.22
CTDSP1-212ENST00000494067 CLDN6P56747 220 aa13.66□□□□□ -0.22
CTDSP1-212ENST00000494067 UBXN1Q04323 297 aa13.66□□□□□ -0.22
CTDSP1-212ENST00000494067 TYRO3Q06418 890 aa13.66□□□□□ -0.22
CTDSP1-212ENST00000494067 POLD3Q15054 466 aaPredicted RBP13.66□□□□□ -0.22
CTDSP1-212ENST00000494067 E4F1Q66K89 784 aaPredicted RBP13.66□□□□□ -0.22
CTDSP1-212ENST00000494067 FBXL19Q6PCT2 694 aa13.66□□□□□ -0.22
CTDSP1-212ENST00000494067 WDR59Q6PJI9 974 aa13.66□□□□□ -0.22
CTDSP1-212ENST00000494067 DPY19L3Q6ZPD9 716 aa13.66□□□□□ -0.22
CTDSP1-212ENST00000494067 ERN2Q76MJ5 926 aaKnown RBP13.66□□□□□ -0.22
CTDSP1-212ENST00000494067 STRADAQ7RTN6 431 aa13.66□□□□□ -0.22
CTDSP1-212ENST00000494067 KANSL1Q7Z3B3 1105 aa13.66□□□□□ -0.22
CTDSP1-212ENST00000494067 PHF13Q86YI8 300 aaPredicted RBP13.66□□□□□ -0.22
CTDSP1-212ENST00000494067 RYBPQ8N488 228 aaPredicted RBP13.66□□□□□ -0.22
CTDSP1-212ENST00000494067 GRIN3AQ8TCU5 1115 aa13.66□□□□□ -0.22
CTDSP1-212ENST00000494067 BAP1Q92560 729 aa13.66□□□□□ -0.22
CTDSP1-212ENST00000494067 KLK6Q92876 244 aa13.66□□□□□ -0.22
CTDSP1-212ENST00000494067 HEPHQ9BQS7 1158 aa13.66□□□□□ -0.22
CTDSP1-212ENST00000494067 NOL6Q9H6R4 1146 aaKnown RBP13.66□□□□□ -0.22
CTDSP1-212ENST00000494067 FZD3Q9NPG1 666 aa13.66□□□□□ -0.22
CTDSP1-212ENST00000494067 SEPT11Q9NVA2 429 aaKnown RBP13.66□□□□□ -0.22
CTDSP1-212ENST00000494067 TAS2R14Q9NYV8 317 aa13.66□□□□□ -0.22
CTDSP1-212ENST00000494067 ADAM22Q9P0K1 906 aa13.66□□□□□ -0.22
CTDSP1-212ENST00000494067 ZFR2Q9UPR6 939 aaKnown RBP13.66□□□□□ -0.22
CTDSP1-212ENST00000494067 FCF1Q9Y324 198 aaKnown RBP13.66□□□□□ -0.22
CTDSP1-212ENST00000494067 CXorf51AA0A1B0GTR3 108 aa13.65□□□□□ -0.22
CTDSP1-212ENST00000494067 A0A1W2PQU0 124 aa13.65□□□□□ -0.22
CTDSP1-212ENST00000494067 SLC31A1O15431 190 aa13.65□□□□□ -0.22
CTDSP1-212ENST00000494067 CCP110O43303 1012 aa13.65□□□□□ -0.22
CTDSP1-212ENST00000494067 LRIG2O94898 1065 aa13.65□□□□□ -0.22
CTDSP1-212ENST00000494067 JUPP14923 745 aa13.65□□□□□ -0.22
CTDSP1-212ENST00000494067 RHOQP17081 205 aa13.65□□□□□ -0.22
CTDSP1-212ENST00000494067 HNRNPA2B1P22626 353 aaKnown RBP13.65□□□□□ -0.22
CTDSP1-212ENST00000494067 MAPKAPK2P49137 400 aa13.65□□□□□ -0.22
CTDSP1-212ENST00000494067 RPL7AP62424 266 aaKnown RBP13.65□□□□□ -0.22
CTDSP1-212ENST00000494067 OGDHQ02218 1023 aa13.65□□□□□ -0.22
CTDSP1-212ENST00000494067 NRG1Q02297 640 aaPredicted RBP13.65□□□□□ -0.22
CTDSP1-212ENST00000494067 BNIP3Q12983 259 aa13.65□□□□□ -0.22
CTDSP1-212ENST00000494067 SMAD1Q15797 465 aaKnown RBP13.65□□□□□ -0.22
CTDSP1-212ENST00000494067 ANO6Q4KMQ2 910 aa13.65□□□□□ -0.22
CTDSP1-212ENST00000494067 CARD16Q5EG05 197 aa13.65□□□□□ -0.22
CTDSP1-212ENST00000494067 PPP1R15BQ5SWA1 713 aa13.65□□□□□ -0.22
CTDSP1-212ENST00000494067 CCDC183Q5T5S1 534 aa13.65□□□□□ -0.22
CTDSP1-212ENST00000494067 DHRS13Q6UX07 377 aa13.65□□□□□ -0.22
CTDSP1-212ENST00000494067 KDM7AQ6ZMT4 941 aa13.65□□□□□ -0.22
CTDSP1-212ENST00000494067 LEKR1Q6ZMV7 388 aa13.65□□□□□ -0.22
CTDSP1-212ENST00000494067 ZSCAN30Q86W11 494 aa13.65□□□□□ -0.22
CTDSP1-212ENST00000494067 HORMAD1Q86X24 394 aa13.65□□□□□ -0.22
CTDSP1-212ENST00000494067 ZNF354CQ86Y25 554 aa13.65□□□□□ -0.22
CTDSP1-212ENST00000494067 PDCD7Q8N8D1 485 aaKnown RBP13.65□□□□□ -0.22
CTDSP1-212ENST00000494067 NETO2Q8NC67 525 aa13.65□□□□□ -0.22
CTDSP1-212ENST00000494067 FAM172AQ8WUF8 416 aa13.65□□□□□ -0.22
CTDSP1-212ENST00000494067 FEM1CQ96JP0 617 aa13.65□□□□□ -0.22
CTDSP1-212ENST00000494067 MYOCQ99972 504 aa13.65□□□□□ -0.22
CTDSP1-212ENST00000494067 HDAC8Q9BY41 377 aa13.65□□□□□ -0.22
CTDSP1-212ENST00000494067 KLC2Q9H0B6 622 aa13.65□□□□□ -0.22
CTDSP1-212ENST00000494067 OSBPL2Q9H1P3 480 aa13.65□□□□□ -0.22
CTDSP1-212ENST00000494067 DNAI1Q9UI46 699 aa13.65□□□□□ -0.22
CTDSP1-212ENST00000494067 SPINT1O43278 529 aa13.64□□□□□ -0.23
CTDSP1-212ENST00000494067 LEFTY1O75610 366 aa13.64□□□□□ -0.23
CTDSP1-212ENST00000494067 THEGLP0DJG4 465 aa13.64□□□□□ -0.23
CTDSP1-212ENST00000494067 PRLRP16471 622 aa13.64□□□□□ -0.23
CTDSP1-212ENST00000494067 GPD1P21695 349 aa13.64□□□□□ -0.23
CTDSP1-212ENST00000494067 SNRPD1P62314 119 aaKnown RBP13.64□□□□□ -0.23
CTDSP1-212ENST00000494067 RPS21P63220 83 aaKnown RBP13.64□□□□□ -0.23
CTDSP1-212ENST00000494067 ILKQ13418 452 aa13.64□□□□□ -0.23
CTDSP1-212ENST00000494067 FGL2Q14314 439 aa13.64□□□□□ -0.23
CTDSP1-212ENST00000494067 ZNF284Q2VY69 593 aa13.64□□□□□ -0.23
CTDSP1-212ENST00000494067 SEL1L3Q68CR1 1132 aa13.64□□□□□ -0.23
CTDSP1-212ENST00000494067 KIAA1161Q6NSJ0 714 aa13.64□□□□□ -0.23
CTDSP1-212ENST00000494067 IRF2BP2Q7Z5L9 587 aa13.64□□□□□ -0.23
CTDSP1-212ENST00000494067 SLFN11Q7Z7L1 901 aa13.64□□□□□ -0.23
CTDSP1-212ENST00000494067 DCP2Q8IU60 420 aaKnown RBP13.64□□□□□ -0.23
CTDSP1-212ENST00000494067 TMEM145Q8NBT3 493 aa13.64□□□□□ -0.23
CTDSP1-212ENST00000494067 C3orf20Q8ND61 904 aa13.64□□□□□ -0.23
CTDSP1-212ENST00000494067 OR6K2Q8NGY2 324 aa13.64□□□□□ -0.23
CTDSP1-212ENST00000494067 ARHGEF2Q92974 986 aaKnown RBP13.64□□□□□ -0.23
CTDSP1-212ENST00000494067 ISG20Q96AZ6 181 aaKnown RBP13.64□□□□□ -0.23
CTDSP1-212ENST00000494067 TBC1D31Q96DN5 1066 aa13.64□□□□□ -0.23
CTDSP1-212ENST00000494067 LRIG1Q96JA1 1093 aa13.64□□□□□ -0.23
CTDSP1-212ENST00000494067 AGPAT1Q99943 283 aa13.64□□□□□ -0.23
CTDSP1-212ENST00000494067 CALN1Q9BXU9 219 aa13.64□□□□□ -0.23
CTDSP1-212ENST00000494067 NAT10Q9H0A0 1025 aaKnown RBP13.64□□□□□ -0.23
CTDSP1-212ENST00000494067 MAGEH1Q9H213 219 aa13.64□□□□□ -0.23
CTDSP1-212ENST00000494067 EVA1BQ9NVM1 165 aa13.64□□□□□ -0.23
CTDSP1-212ENST00000494067 TMEM248Q9NWD8 314 aa13.64□□□□□ -0.23
CTDSP1-212ENST00000494067 HECAQ9UBI9 543 aaPredicted RBP13.64□□□□□ -0.23
CTDSP1-212ENST00000494067 LHX6Q9UPM6 363 aa13.64□□□□□ -0.23
CTDSP1-212ENST00000494067 CABIN1Q9Y6J0 2220 aa13.63□□□□□ -0.23
CTDSP1-212ENST00000494067 FAM149AA5PLN7 773 aa13.63□□□□□ -0.23
CTDSP1-212ENST00000494067 TRABD2BA6NFA1 517 aa13.63□□□□□ -0.23
CTDSP1-212ENST00000494067 NEMP1O14524 444 aa13.63□□□□□ -0.23
CTDSP1-212ENST00000494067 RAMP2O60895 175 aa13.63□□□□□ -0.23
CTDSP1-212ENST00000494067 PLEKP08567 350 aaPredicted RBP13.63□□□□□ -0.23
CTDSP1-212ENST00000494067 ALPPL2P10696 532 aa13.63□□□□□ -0.23
CTDSP1-212ENST00000494067 ADRB3P13945 408 aa13.63□□□□□ -0.23
CTDSP1-212ENST00000494067 CKMT2P17540 419 aa13.63□□□□□ -0.23
CTDSP1-212ENST00000494067 ITGB7P26010 798 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms