RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 HEPHQ9BQS7 1158 aa23.04■■□□□ 1.28
SNIP1-203ENST00000493916 HDAC8Q9BY41 377 aa23.04■■□□□ 1.28
SNIP1-203ENST00000493916 KLC2Q9H0B6 622 aa23.04■■□□□ 1.28
SNIP1-203ENST00000493916 DEF6Q9H4E7 631 aa23.04■■□□□ 1.28
SNIP1-203ENST00000493916 PREBQ9HCU5 417 aa23.04■■□□□ 1.28
SNIP1-203ENST00000493916 DYRK4Q9NR20 520 aa23.04■■□□□ 1.28
SNIP1-203ENST00000493916 CACNA1EQ15878 2313 aa23.04■■□□□ 1.28
SNIP1-203ENST00000493916 TBC1D3DA0A087WVF3 549 aa23.03■■□□□ 1.28
SNIP1-203ENST00000493916 TBC1D3IA0A087WXS9 549 aa23.03■■□□□ 1.28
SNIP1-203ENST00000493916 TBC1D3EA0A087X179 549 aa23.03■■□□□ 1.28
SNIP1-203ENST00000493916 TBC1D3KA0A087X1G2 549 aa23.03■■□□□ 1.28
SNIP1-203ENST00000493916 MED19A0JLT2 244 aaPredicted RBP23.03■■□□□ 1.28
SNIP1-203ENST00000493916 TBC1D3FA6NER0 549 aaPredicted RBP23.03■■□□□ 1.28
SNIP1-203ENST00000493916 TBC1D3LB9A6J9 549 aa23.03■■□□□ 1.28
SNIP1-203ENST00000493916 BUB1O43683 1085 aa23.03■■□□□ 1.28
SNIP1-203ENST00000493916 GJB3O75712 270 aa23.03■■□□□ 1.28
SNIP1-203ENST00000493916 TBC1D3HP0C7X1 549 aa23.03■■□□□ 1.28
SNIP1-203ENST00000493916 CSRP1P21291 193 aaKnown RBP23.03■■□□□ 1.28
SNIP1-203ENST00000493916 DNA2P51530 1060 aa23.03■■□□□ 1.28
SNIP1-203ENST00000493916 TAS2R38P59533 333 aa23.03■■□□□ 1.28
SNIP1-203ENST00000493916 PPP2CBP62714 309 aa23.03■■□□□ 1.28
SNIP1-203ENST00000493916 RACK1P63244 317 aaKnown RBP23.03■■□□□ 1.28
SNIP1-203ENST00000493916 PPP2CAP67775 309 aa23.03■■□□□ 1.28
SNIP1-203ENST00000493916 BNC1Q01954 994 aa23.03■■□□□ 1.28
SNIP1-203ENST00000493916 TBX2Q13207 712 aaPredicted RBP23.03■■□□□ 1.28
SNIP1-203ENST00000493916 DPYSQ14117 519 aa23.03■■□□□ 1.28
SNIP1-203ENST00000493916 PPP6R3Q5H9R7 873 aaPredicted RBP23.03■■□□□ 1.28
SNIP1-203ENST00000493916 TBC1D3GQ6DHY5 549 aa23.03■■□□□ 1.28
SNIP1-203ENST00000493916 TBC1D3CQ6IPX1 549 aa23.03■■□□□ 1.28
SNIP1-203ENST00000493916 TRIM69Q86WT6 500 aa23.03■■□□□ 1.28
SNIP1-203ENST00000493916 TBC1D3Q8IZP1 549 aaPredicted RBP23.03■■□□□ 1.28
SNIP1-203ENST00000493916 ZNF564Q8TBZ8 553 aaPredicted RBP23.03■■□□□ 1.28
SNIP1-203ENST00000493916 TEKT4Q8WW24 435 aa23.03■■□□□ 1.28
SNIP1-203ENST00000493916 BTBD6Q96KE9 485 aa23.03■■□□□ 1.28
SNIP1-203ENST00000493916 TM6SF2Q9BZW4 377 aa23.03■■□□□ 1.28
SNIP1-203ENST00000493916 ZWILCHQ9H900 591 aa23.03■■□□□ 1.28
SNIP1-203ENST00000493916 EBF2Q9HAK2 575 aa23.03■■□□□ 1.28
SNIP1-203ENST00000493916 UVRAGQ9P2Y5 699 aa23.03■■□□□ 1.28
SNIP1-203ENST00000493916 HECAQ9UBI9 543 aaPredicted RBP23.03■■□□□ 1.28
SNIP1-203ENST00000493916 ADAMTS9Q9P2N4 1935 aa23.03■■□□□ 1.28
SNIP1-203ENST00000493916 A0A1B0GVT2 93 aa23.02■■□□□ 1.28
SNIP1-203ENST00000493916 MYO1FO00160 1098 aa23.02■■□□□ 1.28
SNIP1-203ENST00000493916 RNF103O00237 685 aa23.02■■□□□ 1.28
SNIP1-203ENST00000493916 DAPK3O43293 454 aa23.02■■□□□ 1.28
SNIP1-203ENST00000493916 TMCC1O94876 653 aa23.02■■□□□ 1.28
SNIP1-203ENST00000493916 TCF4P15884 667 aa23.02■■□□□ 1.28
SNIP1-203ENST00000493916 ERCC2P18074 760 aa23.02■■□□□ 1.28
SNIP1-203ENST00000493916 ITGB7P26010 798 aa23.02■■□□□ 1.28
SNIP1-203ENST00000493916 NUDT1P36639 197 aa23.02■■□□□ 1.28
SNIP1-203ENST00000493916 CSNK1EP49674 416 aaKnown RBP23.02■■□□□ 1.28
SNIP1-203ENST00000493916 ADKP55263 362 aaKnown RBP23.02■■□□□ 1.28
SNIP1-203ENST00000493916 SNRPD1P62314 119 aaKnown RBP23.02■■□□□ 1.28
SNIP1-203ENST00000493916 SLC25A11Q02978 314 aaKnown RBP23.02■■□□□ 1.28
SNIP1-203ENST00000493916 SLC14A1Q13336 389 aa23.02■■□□□ 1.28
SNIP1-203ENST00000493916 AFMIDQ63HM1 303 aa23.02■■□□□ 1.28
SNIP1-203ENST00000493916 LEKR1Q6ZMV7 388 aa23.02■■□□□ 1.28
SNIP1-203ENST00000493916 ERN2Q76MJ5 926 aaKnown RBP23.02■■□□□ 1.28
SNIP1-203ENST00000493916 OR2AP1Q8NGE2 309 aa23.02■■□□□ 1.28
SNIP1-203ENST00000493916 OR2I1PQ8NGU4 316 aa23.02■■□□□ 1.28
SNIP1-203ENST00000493916 CTNNBL1Q8WYA6 563 aaPredicted RBP23.02■■□□□ 1.28
SNIP1-203ENST00000493916 LRIG1Q96JA1 1093 aa23.02■■□□□ 1.28
SNIP1-203ENST00000493916 CWC15Q9P013 229 aaKnown RBP23.02■■□□□ 1.28
SNIP1-203ENST00000493916 PLXNA2O75051 1894 aa23.01■■□□□ 1.27
SNIP1-203ENST00000493916 H3BRJ5 948 aa23.01■■□□□ 1.27
SNIP1-203ENST00000493916 AKR1B10O60218 316 aa23.01■■□□□ 1.27
SNIP1-203ENST00000493916 KCNK5O95279 499 aa23.01■■□□□ 1.27
SNIP1-203ENST00000493916 CER1O95813 267 aa23.01■■□□□ 1.27
SNIP1-203ENST00000493916 H2AFZP0C0S5 128 aa23.01■■□□□ 1.27
SNIP1-203ENST00000493916 SMTNL2Q2TAL5 461 aa23.01■■□□□ 1.27
SNIP1-203ENST00000493916 KCNT1Q5JUK3 1230 aa23.01■■□□□ 1.27
SNIP1-203ENST00000493916 NEK5Q6P3R8 708 aa23.01■■□□□ 1.27
SNIP1-203ENST00000493916 H2AFVQ71UI9 128 aa23.01■■□□□ 1.27
SNIP1-203ENST00000493916 SLC6A18Q96N87 628 aa23.01■■□□□ 1.27
SNIP1-203ENST00000493916 PACSIN1Q9BY11 444 aa23.01■■□□□ 1.27
SNIP1-203ENST00000493916 TRIM5Q9C035 493 aa23.01■■□□□ 1.27
SNIP1-203ENST00000493916 ZDHHC6Q9H6R6 413 aa23.01■■□□□ 1.27
SNIP1-203ENST00000493916 PDFQ9HBH1 243 aa23.01■■□□□ 1.27
SNIP1-203ENST00000493916 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.01■■□□□ 1.27
SNIP1-203ENST00000493916 LCMT1Q9UIC8 334 aa23.01■■□□□ 1.27
SNIP1-203ENST00000493916 ARHGAP42A6NI28 874 aa23■■□□□ 1.27
SNIP1-203ENST00000493916 AKR1B15C9JRZ8 316 aaPredicted RBP23■■□□□ 1.27
SNIP1-203ENST00000493916 PRAMEF11O60813 436 aa23■■□□□ 1.27
SNIP1-203ENST00000493916 TMEM253P0C7T8 217 aa23■■□□□ 1.27
SNIP1-203ENST00000493916 RARAP10276 462 aa23■■□□□ 1.27
SNIP1-203ENST00000493916 PIP4P1Q86T03 277 aa23■■□□□ 1.27
SNIP1-203ENST00000493916 ARHGAP12Q8IWW6 846 aa23■■□□□ 1.27
SNIP1-203ENST00000493916 HSPH1Q92598 858 aa23■■□□□ 1.27
SNIP1-203ENST00000493916 VOPP1Q96AW1 172 aa23■■□□□ 1.27
SNIP1-203ENST00000493916 CELF6Q96J87 481 aaKnown RBP23■■□□□ 1.27
SNIP1-203ENST00000493916 CCDC42Q96M95 316 aa23■■□□□ 1.27
SNIP1-203ENST00000493916 GDAP1L1Q96MZ0 367 aa23■■□□□ 1.27
SNIP1-203ENST00000493916 CHP1Q99653 195 aa23■■□□□ 1.27
SNIP1-203ENST00000493916 OSBPL1AQ9BXW6 950 aa23■■□□□ 1.27
SNIP1-203ENST00000493916 SLC39A8Q9C0K1 460 aa23■■□□□ 1.27
SNIP1-203ENST00000493916 NHEJ1Q9H9Q4 299 aaPredicted RBP23■■□□□ 1.27
SNIP1-203ENST00000493916 CTTNBP2NLQ9P2B4 639 aa23■■□□□ 1.27
SNIP1-203ENST00000493916 UBA2Q9UBT2 640 aaPredicted RBP23■■□□□ 1.27
SNIP1-203ENST00000493916 DMTF1Q9Y222 760 aa23■■□□□ 1.27
SNIP1-203ENST00000493916 ANKRD6Q9Y2G4 727 aa23■■□□□ 1.27
SNIP1-203ENST00000493916 VILLO15195 856 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms