RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 SLC28A1O00337 649 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 TSPAN4O14817 238 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 SCN2BO60939 215 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 B3GAT3O94766 335 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 VIL1P09327 827 aaKnown RBP7.95□□□□□ -1.14
BRCA1-221ENST00000493795 CSH1P0DML2 217 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 CSH2P0DML3 217 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 CTSEP14091 401 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 ATF4P18848 351 aaPredicted RBP7.95□□□□□ -1.14
BRCA1-221ENST00000493795 PTGS2P35354 604 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 RPL5P46777 297 aaKnown RBP7.95□□□□□ -1.14
BRCA1-221ENST00000493795 PSME3P61289 254 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 RNASE12Q5GAN4 147 aaKnown RBP7.95□□□□□ -1.14
BRCA1-221ENST00000493795 FAAH2Q6GMR7 532 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 ALKBH2Q6NS38 261 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 PLET1Q6UQ28 207 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 SPESP1Q6UW49 350 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 MPZL3Q6UWV2 235 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 TMPRSS11AQ6ZMR5 421 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 POLNQ7Z5Q5 900 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 FAM131BQ86XD5 332 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 GIPC3Q8TF64 312 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 KAT5Q92993 513 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 PNMA5Q96PV4 448 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 MTG1Q9BT17 334 aaPredicted RBP7.95□□□□□ -1.14
BRCA1-221ENST00000493795 OSBPL11Q9BXB4 747 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 CDHR5Q9HBB8 845 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 ATP13A1Q9HD20 1204 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 PLCL2Q9UPR0 1127 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 AXIN2Q9Y2T1 843 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 MEMO1Q9Y316 297 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 MFHAS1Q9Y4C4 1052 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 ABCA10Q8WWZ4 1543 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 PTPRTO14522 1441 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 PALLDQ8WX93 1383 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 PRAMEF22A3QJZ6 481 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 GSG1L2A8MUP6 293 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 ZNF208O43345 1280 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 SH3BGRLO75368 114 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 SERPINB7O75635 380 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 TFRCP02786 760 aaKnown RBP7.94□□□□□ -1.14
BRCA1-221ENST00000493795 CYP11B1P15538 503 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 TPH1P17752 444 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 MGAT1P26572 445 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 GJA8P48165 433 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 POLR2LP62875 67 aaKnown RBP7.94□□□□□ -1.14
BRCA1-221ENST00000493795 SLC45A4Q5BKX6 768 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 GPR107Q5VW38 600 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 LRRC70Q7Z2Q7 622 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 GALNTL5Q7Z4T8 443 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 ENGASEQ8NFI3 743 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 BSNDQ8WZ55 320 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 ELMO1Q92556 727 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 RAD51AP1Q96B01 352 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 PPP1R16AQ96I34 528 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 ZNF607Q96SK3 696 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 SEMA4BQ9NPR2 832 aaPredicted RBP7.94□□□□□ -1.14
BRCA1-221ENST00000493795 AGPAT3Q9NRZ7 376 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 KLQ9UEF7 1012 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 SLC12A4Q9UP95 1085 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 FAM240BA0A1B0GVZ2 78 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 TFECO14948 347 aaPredicted RBP7.94□□□□□ -1.14
BRCA1-221ENST00000493795 CATP04040 527 aaKnown RBP7.94□□□□□ -1.14
BRCA1-221ENST00000493795 ANXA5P08758 320 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 AMD1P17707 334 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 DNAJB2P25686 324 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 PON1P27169 355 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 GRIA3P42263 894 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 XIAPP98170 497 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 BCL2L1Q07817 233 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 FNDC3BQ53EP0 1204 aaKnown RBP7.94□□□□□ -1.14
BRCA1-221ENST00000493795 PEX5LQ8IYB4 626 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 PCDH20Q8N6Y1 951 aaKnown RBP7.94□□□□□ -1.14
BRCA1-221ENST00000493795 OR8H1Q8NGG4 311 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 TSEN15Q8WW01 171 aaKnown RBP7.94□□□□□ -1.14
BRCA1-221ENST00000493795 ACE2Q9BYF1 805 aaPredicted RBP7.94□□□□□ -1.14
BRCA1-221ENST00000493795 EXD2Q9NVH0 621 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 SORCS3Q9UPU3 1222 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 HACD1B0YJ81 288 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 H3BNH8 94 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 RPS6KA4O75676 772 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 CST1P01037 141 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 RRM1P23921 792 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 RPA1P27694 616 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 ELK3P41970 407 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 FXR2P51116 673 aaKnown RBP eCLIP7.94□□□□□ -1.14
BRCA1-221ENST00000493795 TKTL1P51854 596 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 MAZP56270 477 aaKnown RBP7.94□□□□□ -1.14
BRCA1-221ENST00000493795 TBX4P57082 545 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 MEA1Q16626 185 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 ZNF484Q5JVG2 852 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 RBM44Q6ZP01 1051 aaKnown RBP7.94□□□□□ -1.14
BRCA1-221ENST00000493795 USP45Q70EL2 814 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 RERGQ96A58 199 aaPredicted RBP7.94□□□□□ -1.14
BRCA1-221ENST00000493795 CLIP3Q96DZ5 547 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 GLT1D1Q96MS3 346 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 MTMR12Q9C0I1 747 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 SPAG4Q9NPE6 437 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 CATSPERZQ9NTU4 200 aa7.94□□□□□ -1.14
BRCA1-221ENST00000493795 MRTO4Q9UKD2 239 aaKnown RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms