RNA–Protein interactions for RNA: ENST00000493609.1

SMG7-208, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG7, Length 624 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-208ENST00000493609 PCDHA12Q9UN75 941 aa6.24□□□□□ -1.41
SMG7-208ENST00000493609 TMEM98Q9Y2Y6 226 aa6.24□□□□□ -1.41
SMG7-208ENST00000493609 CLDN16Q9Y5I7 305 aa6.24□□□□□ -1.41
SMG7-208ENST00000493609 SETD1BQ9UPS6 1966 aaKnown RBP6.24□□□□□ -1.41
SMG7-208ENST00000493609 GOLGA6L10A0A0M3HER8 536 aa6.23□□□□□ -1.41
SMG7-208ENST00000493609 C17orf113A0A1B0GUU1 675 aa6.23□□□□□ -1.41
SMG7-208ENST00000493609 PABPN1LA6NDY0 278 aaKnown RBP6.23□□□□□ -1.41
SMG7-208ENST00000493609 SPTLC2O15270 562 aa6.23□□□□□ -1.41
SMG7-208ENST00000493609 NDUFB8O95169 186 aa6.23□□□□□ -1.41
SMG7-208ENST00000493609 UNGP13051 313 aaPredicted RBP6.23□□□□□ -1.41
SMG7-208ENST00000493609 TNFAIP3P21580 790 aa6.23□□□□□ -1.41
SMG7-208ENST00000493609 PAFAH1B1P43034 410 aa6.23□□□□□ -1.41
SMG7-208ENST00000493609 ARSFP54793 590 aa6.23□□□□□ -1.41
SMG7-208ENST00000493609 PXDC1Q5TGL8 231 aa6.23□□□□□ -1.41
SMG7-208ENST00000493609 IL20RBQ6UXL0 311 aa6.23□□□□□ -1.41
SMG7-208ENST00000493609 MOB3CQ70IA8 216 aa6.23□□□□□ -1.41
SMG7-208ENST00000493609 H1FNTQ75WM6 255 aaPredicted RBP6.23□□□□□ -1.41
SMG7-208ENST00000493609 PRSS45Q7RTY3 260 aa6.23□□□□□ -1.41
SMG7-208ENST00000493609 CHD1LQ86WJ1 897 aa6.23□□□□□ -1.41
SMG7-208ENST00000493609 FAM185AQ8N0U4 392 aa6.23□□□□□ -1.41
SMG7-208ENST00000493609 ZCCHC10Q8TBK6 192 aa6.23□□□□□ -1.41
SMG7-208ENST00000493609 ATOH1Q92858 354 aaPredicted RBP6.23□□□□□ -1.41
SMG7-208ENST00000493609 SLC29A3Q9BZD2 475 aa6.23□□□□□ -1.41
SMG7-208ENST00000493609 MAP6D1Q9H9H5 199 aa6.23□□□□□ -1.41
SMG7-208ENST00000493609 IL1RAPL1Q9NZN1 696 aa6.23□□□□□ -1.41
SMG7-208ENST00000493609 ZNF70Q9UC06 446 aaPredicted RBP6.23□□□□□ -1.41
SMG7-208ENST00000493609 FBXO40Q9UH90 709 aa6.23□□□□□ -1.41
SMG7-208ENST00000493609 NAALADL1Q9UQQ1 740 aa6.23□□□□□ -1.41
SMG7-208ENST00000493609 TMEM272A0A1B0GTI8 110 aa6.22□□□□□ -1.41
SMG7-208ENST00000493609 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.22□□□□□ -1.41
SMG7-208ENST00000493609 FAM157AC9JC47 383 aa6.22□□□□□ -1.41
SMG7-208ENST00000493609 TSPAN4O14817 238 aa6.22□□□□□ -1.41
SMG7-208ENST00000493609 SLC25A17O43808 307 aa6.22□□□□□ -1.41
SMG7-208ENST00000493609 MBD4O95243 580 aa6.22□□□□□ -1.41
SMG7-208ENST00000493609 F9P00740 461 aa6.22□□□□□ -1.41
SMG7-208ENST00000493609 CD4P01730 458 aa6.22□□□□□ -1.41
SMG7-208ENST00000493609 KRT9P35527 623 aa6.22□□□□□ -1.41
SMG7-208ENST00000493609 EFNB1P98172 346 aa6.22□□□□□ -1.41
SMG7-208ENST00000493609 PRICKLE4Q2TBC4 344 aa6.22□□□□□ -1.41
SMG7-208ENST00000493609 HORMAD2Q8N7B1 307 aa6.22□□□□□ -1.41
SMG7-208ENST00000493609 KDM1BQ8NB78 822 aa6.22□□□□□ -1.41
SMG7-208ENST00000493609 OR4N2Q8NGD1 307 aa6.22□□□□□ -1.41
SMG7-208ENST00000493609 GDPD5Q8WTR4 605 aa6.22□□□□□ -1.41
SMG7-208ENST00000493609 KIF1BPQ96EK5 621 aa6.22□□□□□ -1.41
SMG7-208ENST00000493609 B3GNT4Q9C0J1 378 aa6.22□□□□□ -1.41
SMG7-208ENST00000493609 RNF146Q9NTX7 359 aa6.22□□□□□ -1.41
SMG7-208ENST00000493609 HS3ST3B1Q9Y662 390 aa6.22□□□□□ -1.41
SMG7-208ENST00000493609 GAGE10A6NGK3 116 aa6.21□□□□□ -1.42
SMG7-208ENST00000493609 RNMTO43148 476 aaKnown RBP6.21□□□□□ -1.42
SMG7-208ENST00000493609 YWHAQP27348 245 aa6.21□□□□□ -1.42
SMG7-208ENST00000493609 ME1P48163 572 aa6.21□□□□□ -1.42
SMG7-208ENST00000493609 UFM1P61960 85 aa6.21□□□□□ -1.42
SMG7-208ENST00000493609 DDX10Q13206 875 aaKnown RBP6.21□□□□□ -1.42
SMG7-208ENST00000493609 EDRF1Q3B7T1 1238 aa6.21□□□□□ -1.42
SMG7-208ENST00000493609 TMEM71Q6P5X7 295 aa6.21□□□□□ -1.42
SMG7-208ENST00000493609 ARFGAP1Q8N6T3 406 aa6.21□□□□□ -1.42
SMG7-208ENST00000493609 NRACQ8N912 160 aa6.21□□□□□ -1.42
SMG7-208ENST00000493609 RASSF8Q8NHQ8 419 aa6.21□□□□□ -1.42
SMG7-208ENST00000493609 ZNF778Q96MU6 729 aa6.21□□□□□ -1.42
SMG7-208ENST00000493609 HEMGNQ9BXL5 484 aa6.21□□□□□ -1.42
SMG7-208ENST00000493609 USP44Q9H0E7 712 aa6.21□□□□□ -1.42
SMG7-208ENST00000493609 SLC25A18Q9H1K4 315 aa6.21□□□□□ -1.42
SMG7-208ENST00000493609 VEZTQ9HBM0 779 aa6.21□□□□□ -1.42
SMG7-208ENST00000493609 DECR2Q9NUI1 292 aa6.21□□□□□ -1.42
SMG7-208ENST00000493609 ELOVL5Q9NYP7 299 aa6.21□□□□□ -1.42
SMG7-208ENST00000493609 HCN3Q9P1Z3 774 aa6.21□□□□□ -1.42
SMG7-208ENST00000493609 CAMK2AQ9UQM7 478 aa6.21□□□□□ -1.42
SMG7-208ENST00000493609 SLC4A4Q9Y6R1 1079 aa6.21□□□□□ -1.42
SMG7-208ENST00000493609 CCDC88BA6NC98 1476 aa6.21□□□□□ -1.42
SMG7-208ENST00000493609 ARHGAP10A1A4S6 786 aa6.2□□□□□ -1.42
SMG7-208ENST00000493609 HSPB6O14558 160 aa6.2□□□□□ -1.42
SMG7-208ENST00000493609 PPEF2O14830 753 aa6.2□□□□□ -1.42
SMG7-208ENST00000493609 ZC3H11AO75152 810 aaKnown RBP eCLIP6.2□□□□□ -1.42
SMG7-208ENST00000493609 EPN2O95208 641 aa6.2□□□□□ -1.42
SMG7-208ENST00000493609 SRSF1Q07955 248 aaKnown RBP eCLIP6.2□□□□□ -1.42
SMG7-208ENST00000493609 HNRNPA0Q13151 305 aaKnown RBP6.2□□□□□ -1.42
SMG7-208ENST00000493609 MANEAQ5SRI9 462 aa6.2□□□□□ -1.42
SMG7-208ENST00000493609 MAATS1Q7Z4T9 603 aa6.2□□□□□ -1.42
SMG7-208ENST00000493609 R3HCC1LQ7Z5L2 792 aaKnown RBP6.2□□□□□ -1.42
SMG7-208ENST00000493609 MRPL10Q7Z7H8 261 aaKnown RBP6.2□□□□□ -1.42
SMG7-208ENST00000493609 SERPINA11Q86U17 422 aa6.2□□□□□ -1.42
SMG7-208ENST00000493609 ARMC8Q8IUR7 673 aa6.2□□□□□ -1.42
SMG7-208ENST00000493609 MMP21Q8N119 569 aa6.2□□□□□ -1.42
SMG7-208ENST00000493609 VOPP1Q96AW1 172 aa6.2□□□□□ -1.42
SMG7-208ENST00000493609 FOXP1Q9H334 677 aaPredicted RBP6.2□□□□□ -1.42
SMG7-208ENST00000493609 UNC45AQ9H3U1 944 aa6.2□□□□□ -1.42
SMG7-208ENST00000493609 WDR6Q9NNW5 1121 aaKnown RBP6.2□□□□□ -1.42
SMG7-208ENST00000493609 SNTG1Q9NSN8 517 aa6.2□□□□□ -1.42
SMG7-208ENST00000493609 BABAM1Q9NWV8 329 aa6.2□□□□□ -1.42
SMG7-208ENST00000493609 TBC1D14Q9P2M4 693 aa6.2□□□□□ -1.42
SMG7-208ENST00000493609 ADGRF5Q8IZF2 1346 aa6.2□□□□□ -1.42
SMG7-208ENST00000493609 LY6G6EA0A0G2JKS1 128 aa6.19□□□□□ -1.42
SMG7-208ENST00000493609 C17orf102A2RUQ5 167 aa6.19□□□□□ -1.42
SMG7-208ENST00000493609 STMND1H3BQB6 276 aa6.19□□□□□ -1.42
SMG7-208ENST00000493609 TBX18O95935 607 aa6.19□□□□□ -1.42
SMG7-208ENST00000493609 FGF2P09038 288 aa6.19□□□□□ -1.42
SMG7-208ENST00000493609 RFC1P35251 1148 aaPredicted RBP6.19□□□□□ -1.42
SMG7-208ENST00000493609 ALDH7A1P49419 539 aaKnown RBP6.19□□□□□ -1.42
SMG7-208ENST00000493609 ZNF81P51508 661 aa6.19□□□□□ -1.42
SMG7-208ENST00000493609 CYP4A11Q02928 519 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms