RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 CLN3Q13286 438 aa18.04■□□□□ 0.48
NUP50-218ENST00000493456 FGL2Q14314 439 aa18.04■□□□□ 0.48
NUP50-218ENST00000493456 C14orf80Q86SX3 495 aa18.04■□□□□ 0.48
NUP50-218ENST00000493456 BTN2A2Q8WVV5 523 aa18.04■□□□□ 0.48
NUP50-218ENST00000493456 NAT6Q93015 286 aa18.04■□□□□ 0.48
NUP50-218ENST00000493456 SMARCE1Q969G3 411 aa18.04■□□□□ 0.48
NUP50-218ENST00000493456 LENG8Q96PV6 779 aaPredicted RBP18.04■□□□□ 0.48
NUP50-218ENST00000493456 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.04■□□□□ 0.48
NUP50-218ENST00000493456 IPO11Q9UI26 975 aaKnown RBP18.04■□□□□ 0.48
NUP50-218ENST00000493456 RNF103O00237 685 aa18.03■□□□□ 0.48
NUP50-218ENST00000493456 SMAD6O43541 496 aaKnown RBP18.03■□□□□ 0.48
NUP50-218ENST00000493456 CNTN5O94779 1100 aa18.03■□□□□ 0.48
NUP50-218ENST00000493456 PDE1CQ14123 709 aaPredicted RBP18.03■□□□□ 0.48
NUP50-218ENST00000493456 DEFB133Q30KQ1 61 aa18.03■□□□□ 0.48
NUP50-218ENST00000493456 ARL13BQ3SXY8 428 aa18.03■□□□□ 0.48
NUP50-218ENST00000493456 XKR5Q6UX68 686 aa18.03■□□□□ 0.48
NUP50-218ENST00000493456 DPY19L3Q6ZPD9 716 aa18.03■□□□□ 0.48
NUP50-218ENST00000493456 ENOSF1Q7L5Y1 443 aa18.03■□□□□ 0.48
NUP50-218ENST00000493456 PRICKLE2Q7Z3G6 844 aa18.03■□□□□ 0.48
NUP50-218ENST00000493456 FMR1NBQ8N0W7 255 aaPredicted RBP18.03■□□□□ 0.48
NUP50-218ENST00000493456 DENND6BQ8NEG7 585 aa18.03■□□□□ 0.48
NUP50-218ENST00000493456 LMX1AQ8TE12 382 aa18.03■□□□□ 0.48
NUP50-218ENST00000493456 PPP1R13BQ96KQ4 1090 aa18.03■□□□□ 0.48
NUP50-218ENST00000493456 CCNL2Q96S94 520 aaPredicted RBP18.03■□□□□ 0.48
NUP50-218ENST00000493456 CPXM1Q96SM3 734 aa18.03■□□□□ 0.48
NUP50-218ENST00000493456 BOCQ9BWV1 1114 aa18.03■□□□□ 0.48
NUP50-218ENST00000493456 CEP44Q9C0F1 390 aa18.03■□□□□ 0.48
NUP50-218ENST00000493456 INTS2Q9H0H0 1204 aaKnown RBP18.03■□□□□ 0.48
NUP50-218ENST00000493456 SIK2Q9H0K1 926 aa18.03■□□□□ 0.48
NUP50-218ENST00000493456 SPASTQ9UBP0 616 aa18.03■□□□□ 0.48
NUP50-218ENST00000493456 KLF15Q9UIH9 416 aa18.03■□□□□ 0.48
NUP50-218ENST00000493456 ZDHHC9Q9Y397 364 aa18.03■□□□□ 0.48
NUP50-218ENST00000493456 FADS3Q9Y5Q0 445 aa18.03■□□□□ 0.48
NUP50-218ENST00000493456 HEMK1Q9Y5R4 338 aaPredicted RBP18.03■□□□□ 0.48
NUP50-218ENST00000493456 WASF2Q9Y6W5 498 aa18.03■□□□□ 0.48
NUP50-218ENST00000493456 CCDC187A0A096LP49 1063 aa18.02■□□□□ 0.48
NUP50-218ENST00000493456 RAD51BO15315 384 aa18.02■□□□□ 0.48
NUP50-218ENST00000493456 DAB1O75553 588 aa18.02■□□□□ 0.48
NUP50-218ENST00000493456 GRAP2O75791 330 aa18.02■□□□□ 0.48
NUP50-218ENST00000493456 TNFSF15O95150 251 aa18.02■□□□□ 0.48
NUP50-218ENST00000493456 L1CAMP32004 1257 aa18.02■□□□□ 0.48
NUP50-218ENST00000493456 SGCGQ13326 291 aa18.02■□□□□ 0.48
NUP50-218ENST00000493456 ZSCAN23Q3MJ62 389 aa18.02■□□□□ 0.48
NUP50-218ENST00000493456 ALFQ53S48 1182 aa18.02■□□□□ 0.48
NUP50-218ENST00000493456 BRMS1LQ5PSV4 323 aa18.02■□□□□ 0.48
NUP50-218ENST00000493456 ACBD5Q5T8D3 534 aaPredicted RBP18.02■□□□□ 0.48
NUP50-218ENST00000493456 FOXR1Q6PIV2 292 aa18.02■□□□□ 0.48
NUP50-218ENST00000493456 FOXR2Q6PJQ5 311 aa18.02■□□□□ 0.48
NUP50-218ENST00000493456 OLFML1Q6UWY5 402 aa18.02■□□□□ 0.48
NUP50-218ENST00000493456 LINGO4Q6UY18 593 aa18.02■□□□□ 0.48
NUP50-218ENST00000493456 C11orf57Q6ZUT1 292 aaPredicted RBP18.02■□□□□ 0.48
NUP50-218ENST00000493456 PCDH20Q8N6Y1 951 aaKnown RBP18.02■□□□□ 0.48
NUP50-218ENST00000493456 FAM81BQ96LP2 452 aa18.02■□□□□ 0.48
NUP50-218ENST00000493456 TBATAQ96M53 351 aa18.02■□□□□ 0.48
NUP50-218ENST00000493456 TRPM6Q9BX84 2022 aa18.02■□□□□ 0.48
NUP50-218ENST00000493456 FAM117AQ9C073 453 aa18.02■□□□□ 0.48
NUP50-218ENST00000493456 TNKS2Q9H2K2 1166 aa18.02■□□□□ 0.48
NUP50-218ENST00000493456 UBE2TQ9NPD8 197 aaPredicted RBP18.02■□□□□ 0.48
NUP50-218ENST00000493456 ARHGEF38Q9NXL2 777 aa18.02■□□□□ 0.48
NUP50-218ENST00000493456 RRN3Q9NYV6 651 aa18.02■□□□□ 0.48
NUP50-218ENST00000493456 HOOK1Q9UJC3 728 aaKnown RBP18.02■□□□□ 0.48
NUP50-218ENST00000493456 ATXN7L1Q9ULK2 861 aaPredicted RBP18.02■□□□□ 0.48
NUP50-218ENST00000493456 M0QYT0 321 aa18.01■□□□□ 0.47
NUP50-218ENST00000493456 MUSKO15146 869 aa18.01■□□□□ 0.47
NUP50-218ENST00000493456 AFPP02771 609 aaKnown RBP18.01■□□□□ 0.47
NUP50-218ENST00000493456 NOS2P35228 1153 aa18.01■□□□□ 0.47
NUP50-218ENST00000493456 SNX16P57768 344 aa18.01■□□□□ 0.47
NUP50-218ENST00000493456 EIF3IQ13347 325 aaKnown RBP18.01■□□□□ 0.47
NUP50-218ENST00000493456 SPIDRQ14159 915 aa18.01■□□□□ 0.47
NUP50-218ENST00000493456 PTK2BQ14289 1009 aa18.01■□□□□ 0.47
NUP50-218ENST00000493456 PERM1Q5SV97 790 aa18.01■□□□□ 0.47
NUP50-218ENST00000493456 C6orf132Q5T0Z8 1188 aa18.01■□□□□ 0.47
NUP50-218ENST00000493456 RETSATQ6NUM9 610 aa18.01■□□□□ 0.47
NUP50-218ENST00000493456 CRTC1Q6UUV9 634 aa18.01■□□□□ 0.47
NUP50-218ENST00000493456 LRRC31Q6UY01 552 aa18.01■□□□□ 0.47
NUP50-218ENST00000493456 ZNF783Q6ZMS7 281 aa18.01■□□□□ 0.47
NUP50-218ENST00000493456 FAM183BPQ6ZVS7 135 aa18.01■□□□□ 0.47
NUP50-218ENST00000493456 TRIM59Q8IWR1 403 aa18.01■□□□□ 0.47
NUP50-218ENST00000493456 ZNF683Q8IZ20 524 aa18.01■□□□□ 0.47
NUP50-218ENST00000493456 ASB12Q8WXK4 309 aa18.01■□□□□ 0.47
NUP50-218ENST00000493456 LIN37Q96GY3 246 aaPredicted RBP18.01■□□□□ 0.47
NUP50-218ENST00000493456 KLF6Q99612 283 aaPredicted RBP18.01■□□□□ 0.47
NUP50-218ENST00000493456 HEPHQ9BQS7 1158 aa18.01■□□□□ 0.47
NUP50-218ENST00000493456 TKTL2Q9H0I9 626 aa18.01■□□□□ 0.47
NUP50-218ENST00000493456 WDCPQ9H6R7 721 aa18.01■□□□□ 0.47
NUP50-218ENST00000493456 ACP6Q9NPH0 428 aa18.01■□□□□ 0.47
NUP50-218ENST00000493456 TMEM51Q9NW97 253 aa18.01■□□□□ 0.47
NUP50-218ENST00000493456 APOBEC3BQ9UH17 382 aaKnown RBP18.01■□□□□ 0.47
NUP50-218ENST00000493456 PAXBP1Q9Y5B6 917 aa18.01■□□□□ 0.47
NUP50-218ENST00000493456 A0A0D9SEW6 157 aa18■□□□□ 0.47
NUP50-218ENST00000493456 PMS2P1A4D2B8 440 aa18■□□□□ 0.47
NUP50-218ENST00000493456 LMO7DNF2Z398 122 aa18■□□□□ 0.47
NUP50-218ENST00000493456 TSPAN6O43657 245 aa18■□□□□ 0.47
NUP50-218ENST00000493456 ZNF821O75541 412 aaPredicted RBP18■□□□□ 0.47
NUP50-218ENST00000493456 ADCY5O95622 1261 aa18■□□□□ 0.47
NUP50-218ENST00000493456 GNA14O95837 355 aa18■□□□□ 0.47
NUP50-218ENST00000493456 SERPINH1P50454 418 aaKnown RBP18■□□□□ 0.47
NUP50-218ENST00000493456 PDX1P52945 283 aa18■□□□□ 0.47
NUP50-218ENST00000493456 PFN3P60673 137 aa18■□□□□ 0.47
NUP50-218ENST00000493456 SLC20A2Q08357 652 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms