RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 ANXA9O76027 345 aa14.32□□□□□ -0.12
PDZRN3-210ENST00000492909 LAMP2P13473 410 aa14.32□□□□□ -0.12
PDZRN3-210ENST00000492909 CORO7P57737 925 aa14.32□□□□□ -0.12
PDZRN3-210ENST00000492909 LMAN2Q12907 356 aa14.32□□□□□ -0.12
PDZRN3-210ENST00000492909 ZNF235Q14590 738 aa14.32□□□□□ -0.12
PDZRN3-210ENST00000492909 RFTN1Q14699 578 aaPredicted RBP14.32□□□□□ -0.12
PDZRN3-210ENST00000492909 DHCR24Q15392 516 aa14.32□□□□□ -0.12
PDZRN3-210ENST00000492909 UAP1Q16222 522 aaPredicted RBP14.32□□□□□ -0.12
PDZRN3-210ENST00000492909 EML3Q32P44 896 aa14.32□□□□□ -0.12
PDZRN3-210ENST00000492909 SPDYCQ5MJ68 293 aa14.32□□□□□ -0.12
PDZRN3-210ENST00000492909 RELL1Q8IUW5 271 aa14.32□□□□□ -0.12
PDZRN3-210ENST00000492909 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.32□□□□□ -0.12
PDZRN3-210ENST00000492909 BCAS4Q8TDM0 211 aa14.32□□□□□ -0.12
PDZRN3-210ENST00000492909 UBLCP1Q8WVY7 318 aaPredicted RBP14.32□□□□□ -0.12
PDZRN3-210ENST00000492909 ACDQ96AP0 544 aa14.32□□□□□ -0.12
PDZRN3-210ENST00000492909 NECTIN4Q96NY8 510 aa14.32□□□□□ -0.12
PDZRN3-210ENST00000492909 SERPINB12Q96P63 405 aa14.32□□□□□ -0.12
PDZRN3-210ENST00000492909 GORASP1Q9BQQ3 440 aa14.32□□□□□ -0.12
PDZRN3-210ENST00000492909 RASSF4Q9H2L5 321 aa14.32□□□□□ -0.12
PDZRN3-210ENST00000492909 POMKQ9H5K3 350 aa14.32□□□□□ -0.12
PDZRN3-210ENST00000492909 AAR2Q9Y312 384 aaKnown RBP14.32□□□□□ -0.12
PDZRN3-210ENST00000492909 NFS1Q9Y697 457 aa14.32□□□□□ -0.12
PDZRN3-210ENST00000492909 MIA3Q5JRA6 1907 aa14.31□□□□□ -0.12
PDZRN3-210ENST00000492909 GRXCR2A6NFK2 248 aa14.31□□□□□ -0.12
PDZRN3-210ENST00000492909 PSMD3O43242 534 aa14.31□□□□□ -0.12
PDZRN3-210ENST00000492909 SNAP91O60641 907 aa14.31□□□□□ -0.12
PDZRN3-210ENST00000492909 ZMPSTE24O75844 475 aa14.31□□□□□ -0.12
PDZRN3-210ENST00000492909 AP2A1O95782 977 aa14.31□□□□□ -0.12
PDZRN3-210ENST00000492909 ADH1CP00326 375 aa14.31□□□□□ -0.12
PDZRN3-210ENST00000492909 CYP17A1P05093 508 aa14.31□□□□□ -0.12
PDZRN3-210ENST00000492909 NR1D1P20393 614 aa14.31□□□□□ -0.12
PDZRN3-210ENST00000492909 CD70P32970 193 aa14.31□□□□□ -0.12
PDZRN3-210ENST00000492909 ARF5P84085 180 aa14.31□□□□□ -0.12
PDZRN3-210ENST00000492909 ITKQ08881 620 aa14.31□□□□□ -0.12
PDZRN3-210ENST00000492909 PDIA2Q13087 525 aaKnown RBP14.31□□□□□ -0.12
PDZRN3-210ENST00000492909 PLEKHG6Q3KR16 790 aa14.31□□□□□ -0.12
PDZRN3-210ENST00000492909 CEP85LQ5SZL2 805 aa14.31□□□□□ -0.12
PDZRN3-210ENST00000492909 FNBP1LQ5T0N5 605 aa14.31□□□□□ -0.12
PDZRN3-210ENST00000492909 TRIM68Q6AZZ1 485 aa14.31□□□□□ -0.12
PDZRN3-210ENST00000492909 TANGO2Q6ICL3 276 aa14.31□□□□□ -0.12
PDZRN3-210ENST00000492909 TRMT10CQ7L0Y3 403 aaKnown RBP14.31□□□□□ -0.12
PDZRN3-210ENST00000492909 C10orf67Q8IYJ2 551 aa14.31□□□□□ -0.12
PDZRN3-210ENST00000492909 APCDD1Q8J025 514 aa14.31□□□□□ -0.12
PDZRN3-210ENST00000492909 ATP2A3Q93084 1043 aa14.31□□□□□ -0.12
PDZRN3-210ENST00000492909 ASIC4Q96FT7 647 aa14.31□□□□□ -0.12
PDZRN3-210ENST00000492909 FAM107BQ9H098 131 aa14.31□□□□□ -0.12
PDZRN3-210ENST00000492909 SLC25A51Q9H1U9 297 aa14.31□□□□□ -0.12
PDZRN3-210ENST00000492909 PABPC3Q9H361 631 aaKnown RBP14.31□□□□□ -0.12
PDZRN3-210ENST00000492909 SEMA4AQ9H3S1 761 aa14.31□□□□□ -0.12
PDZRN3-210ENST00000492909 XAB2Q9HCS7 855 aaKnown RBP14.31□□□□□ -0.12
PDZRN3-210ENST00000492909 SAYSD1Q9NPB0 183 aa14.31□□□□□ -0.12
PDZRN3-210ENST00000492909 ABCB8Q9NUT2 735 aa14.31□□□□□ -0.12
PDZRN3-210ENST00000492909 THEGQ9P2T0 379 aa14.31□□□□□ -0.12
PDZRN3-210ENST00000492909 SEPT3Q9UH03 358 aa14.31□□□□□ -0.12
PDZRN3-210ENST00000492909 VPS51Q9UID3 782 aa14.31□□□□□ -0.12
PDZRN3-210ENST00000492909 GOLGA6L10A6NI86 522 aa14.3□□□□□ -0.12
PDZRN3-210ENST00000492909 E7ESA3 106 aa14.3□□□□□ -0.12
PDZRN3-210ENST00000492909 NFATC1O95644 943 aa14.3□□□□□ -0.12
PDZRN3-210ENST00000492909 ADH5P11766 374 aa14.3□□□□□ -0.12
PDZRN3-210ENST00000492909 HLA-FP30511 346 aa14.3□□□□□ -0.12
PDZRN3-210ENST00000492909 MAGEA4P43358 317 aa14.3□□□□□ -0.12
PDZRN3-210ENST00000492909 CCT5P48643 541 aa14.3□□□□□ -0.12
PDZRN3-210ENST00000492909 PLK1P53350 603 aa14.3□□□□□ -0.12
PDZRN3-210ENST00000492909 GEMIN4P57678 1058 aaKnown RBP14.3□□□□□ -0.12
PDZRN3-210ENST00000492909 MAXP61244 160 aa14.3□□□□□ -0.12
PDZRN3-210ENST00000492909 SLC20A2Q08357 652 aa14.3□□□□□ -0.12
PDZRN3-210ENST00000492909 LEXMQ3ZCV2 418 aa14.3□□□□□ -0.12
PDZRN3-210ENST00000492909 KCTD11Q693B1 232 aa14.3□□□□□ -0.12
PDZRN3-210ENST00000492909 RETSATQ6NUM9 610 aa14.3□□□□□ -0.12
PDZRN3-210ENST00000492909 VITQ6UXI7 678 aa14.3□□□□□ -0.12
PDZRN3-210ENST00000492909 MFSD6LQ8IWD5 586 aa14.3□□□□□ -0.12
PDZRN3-210ENST00000492909 KLHDC8BQ8IXV7 354 aa14.3□□□□□ -0.12
PDZRN3-210ENST00000492909 ZBED8Q8IZ13 594 aa14.3□□□□□ -0.12
PDZRN3-210ENST00000492909 ST13P5Q8NFI4 369 aaPredicted RBP14.3□□□□□ -0.12
PDZRN3-210ENST00000492909 OXNAD1Q96HP4 312 aaPredicted RBP14.3□□□□□ -0.12
PDZRN3-210ENST00000492909 ZFYVE19Q96K21 471 aa14.3□□□□□ -0.12
PDZRN3-210ENST00000492909 MLPHQ9BV36 600 aaPredicted RBP14.3□□□□□ -0.12
PDZRN3-210ENST00000492909 CINPQ9BW66 212 aaPredicted RBP14.3□□□□□ -0.12
PDZRN3-210ENST00000492909 SLC2A11Q9BYW1 496 aa14.3□□□□□ -0.12
PDZRN3-210ENST00000492909 POLR1EQ9GZS1 481 aaKnown RBP14.3□□□□□ -0.12
PDZRN3-210ENST00000492909 CDC42EP4Q9H3Q1 356 aaKnown RBP14.3□□□□□ -0.12
PDZRN3-210ENST00000492909 LRRC40Q9H9A6 602 aa14.3□□□□□ -0.12
PDZRN3-210ENST00000492909 UBP1Q9NZI7 540 aa14.3□□□□□ -0.12
PDZRN3-210ENST00000492909 USP15Q9Y4E8 981 aaPredicted RBP14.3□□□□□ -0.12
PDZRN3-210ENST00000492909 ACTL7AQ9Y615 435 aa14.3□□□□□ -0.12
PDZRN3-210ENST00000492909 EBAG9O00559 213 aa14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 SUN1O94901 812 aa14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 MLNP12872 115 aa14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 MAGEA9P43362 315 aa14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 ATP1A2P50993 1020 aa14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 GEMP55040 296 aa14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 FCHO2Q0JRZ9 810 aa14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 MTM1Q13496 603 aa14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 PDGFRLQ15198 375 aa14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 BBS9Q3SYG4 887 aa14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 MSS51Q4VC12 460 aa14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 INO80DQ53TQ3 878 aaPredicted RBP14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 TTC19Q6DKK2 380 aaPredicted RBP14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 LINGO4Q6UY18 593 aa14.29□□□□□ -0.12
PDZRN3-210ENST00000492909 ZNF534Q76KX8 674 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms