RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 GSRP00390 522 aa15.37■□□□□ 0.05
USP39-217ENST00000491659 GYPCP04921 128 aa15.37■□□□□ 0.05
USP39-217ENST00000491659 CD38P28907 300 aa15.37■□□□□ 0.05
USP39-217ENST00000491659 MAT2AP31153 395 aaKnown RBP15.37■□□□□ 0.05
USP39-217ENST00000491659 CCT8P50990 548 aa15.37■□□□□ 0.05
USP39-217ENST00000491659 SNRPD1P62314 119 aaKnown RBP15.37■□□□□ 0.05
USP39-217ENST00000491659 PARP15Q460N3 678 aa15.37■□□□□ 0.05
USP39-217ENST00000491659 SETMARQ53H47 684 aaPredicted RBP15.37■□□□□ 0.05
USP39-217ENST00000491659 ERMARDQ5T6L9 678 aa15.37■□□□□ 0.05
USP39-217ENST00000491659 NAPEPLDQ6IQ20 393 aa15.37■□□□□ 0.05
USP39-217ENST00000491659 ERN2Q76MJ5 926 aaKnown RBP15.37■□□□□ 0.05
USP39-217ENST00000491659 SNRNP25Q9BV90 132 aaKnown RBP15.37■□□□□ 0.05
USP39-217ENST00000491659 DHX35Q9H5Z1 703 aaKnown RBP15.37■□□□□ 0.05
USP39-217ENST00000491659 ZDHHC6Q9H6R6 413 aa15.37■□□□□ 0.05
USP39-217ENST00000491659 EBF2Q9HAK2 575 aa15.37■□□□□ 0.05
USP39-217ENST00000491659 GPATCH2LQ9NWQ4 482 aa15.37■□□□□ 0.05
USP39-217ENST00000491659 HECAQ9UBI9 543 aaPredicted RBP15.37■□□□□ 0.05
USP39-217ENST00000491659 PCSK1NQ9UHG2 260 aa15.37■□□□□ 0.05
USP39-217ENST00000491659 ANGPTL2Q9UKU9 493 aa15.37■□□□□ 0.05
USP39-217ENST00000491659 DMTF1Q9Y222 760 aa15.37■□□□□ 0.05
USP39-217ENST00000491659 PCDHGB2Q9Y5G2 931 aa15.37■□□□□ 0.05
USP39-217ENST00000491659 ACTL7AQ9Y615 435 aa15.37■□□□□ 0.05
USP39-217ENST00000491659 WASF2Q9Y6W5 498 aa15.37■□□□□ 0.05
USP39-217ENST00000491659 RASA4BC9J798 803 aa15.36■□□□□ 0.05
USP39-217ENST00000491659 FLRT2O43155 660 aa15.36■□□□□ 0.05
USP39-217ENST00000491659 RASA4O43374 803 aa15.36■□□□□ 0.05
USP39-217ENST00000491659 BUB1O43683 1085 aa15.36■□□□□ 0.05
USP39-217ENST00000491659 SH3BP5O60239 455 aa15.36■□□□□ 0.05
USP39-217ENST00000491659 RNGTTO60942 597 aaKnown RBP15.36■□□□□ 0.05
USP39-217ENST00000491659 CD160O95971 181 aa15.36■□□□□ 0.05
USP39-217ENST00000491659 ITGB7P26010 798 aa15.36■□□□□ 0.05
USP39-217ENST00000491659 MIPP30301 263 aa15.36■□□□□ 0.05
USP39-217ENST00000491659 CASP14P31944 242 aa15.36■□□□□ 0.05
USP39-217ENST00000491659 CTSKP43235 329 aa15.36■□□□□ 0.05
USP39-217ENST00000491659 NEK3P51956 506 aa15.36■□□□□ 0.05
USP39-217ENST00000491659 SIM1P81133 766 aaPredicted RBP15.36■□□□□ 0.05
USP39-217ENST00000491659 FOXC1Q12948 553 aa15.36■□□□□ 0.05
USP39-217ENST00000491659 SUZ12Q15022 739 aaKnown RBP15.36■□□□□ 0.05
USP39-217ENST00000491659 NFKBIBQ15653 356 aa15.36■□□□□ 0.05
USP39-217ENST00000491659 LEKR1Q6ZMV7 388 aa15.36■□□□□ 0.05
USP39-217ENST00000491659 PLPP6Q8IY26 295 aa15.36■□□□□ 0.05
USP39-217ENST00000491659 OR2AP1Q8NGE2 309 aa15.36■□□□□ 0.05
USP39-217ENST00000491659 SETD7Q8WTS6 366 aaKnown RBP15.36■□□□□ 0.05
USP39-217ENST00000491659 CASKIN2Q8WXE0 1202 aa15.36■□□□□ 0.05
USP39-217ENST00000491659 HMCESQ96FZ2 354 aa15.36■□□□□ 0.05
USP39-217ENST00000491659 PEBP4Q96S96 227 aa15.36■□□□□ 0.05
USP39-217ENST00000491659 HDAC8Q9BY41 377 aa15.36■□□□□ 0.05
USP39-217ENST00000491659 TRIM7Q9C029 511 aa15.36■□□□□ 0.05
USP39-217ENST00000491659 NOL6Q9H6R4 1146 aaKnown RBP15.36■□□□□ 0.05
USP39-217ENST00000491659 SPAARA0A1B0GVQ0 90 aa15.35■□□□□ 0.05
USP39-217ENST00000491659 DAPK3O43293 454 aa15.35■□□□□ 0.05
USP39-217ENST00000491659 DFNA5O60443 496 aa15.35■□□□□ 0.05
USP39-217ENST00000491659 LRCH4O75427 683 aa15.35■□□□□ 0.05
USP39-217ENST00000491659 TMCC1O94876 653 aa15.35■□□□□ 0.05
USP39-217ENST00000491659 ZNF135P52742 658 aaPredicted RBP15.35■□□□□ 0.05
USP39-217ENST00000491659 TAS2R38P59533 333 aa15.35■□□□□ 0.05
USP39-217ENST00000491659 TRIM14Q14142 442 aa15.35■□□□□ 0.05
USP39-217ENST00000491659 ACAP1Q15027 740 aa15.35■□□□□ 0.05
USP39-217ENST00000491659 CA9Q16790 459 aa15.35■□□□□ 0.05
USP39-217ENST00000491659 ZNF423Q2M1K9 1284 aa15.35■□□□□ 0.05
USP39-217ENST00000491659 INAVAQ3KP66 663 aa15.35■□□□□ 0.05
USP39-217ENST00000491659 NEK5Q6P3R8 708 aa15.35■□□□□ 0.05
USP39-217ENST00000491659 PSTKQ8IV42 348 aaKnown RBP15.35■□□□□ 0.05
USP39-217ENST00000491659 UMODL1-AS1Q8N2C9 162 aa15.35■□□□□ 0.05
USP39-217ENST00000491659 ARFGAP1Q8N6T3 406 aa15.35■□□□□ 0.05
USP39-217ENST00000491659 LRIG1Q96JA1 1093 aa15.35■□□□□ 0.05
USP39-217ENST00000491659 GDAP1L1Q96MZ0 367 aa15.35■□□□□ 0.05
USP39-217ENST00000491659 KCTD15Q96SI1 283 aaPredicted RBP15.35■□□□□ 0.05
USP39-217ENST00000491659 GDF3Q9NR23 364 aa15.35■□□□□ 0.05
USP39-217ENST00000491659 DOCK9Q9BZ29 2069 aa15.34■□□□□ 0.05
USP39-217ENST00000491659 A0A087X0T9 212 aa15.34■□□□□ 0.05
USP39-217ENST00000491659 A0A1W2PQU0 124 aa15.34■□□□□ 0.05
USP39-217ENST00000491659 H0Y8X5 98 aa15.34■□□□□ 0.05
USP39-217ENST00000491659 KRIT1O00522 736 aa15.34■□□□□ 0.05
USP39-217ENST00000491659 MAGEC1O60732 1142 aa15.34■□□□□ 0.05
USP39-217ENST00000491659 PCDH8O95206 1070 aa15.34■□□□□ 0.05
USP39-217ENST00000491659 IGSF6O95976 241 aa15.34■□□□□ 0.05
USP39-217ENST00000491659 WNT1P04628 370 aa15.34■□□□□ 0.05
USP39-217ENST00000491659 FAM228BP0C875 321 aa15.34■□□□□ 0.05
USP39-217ENST00000491659 ADRB3P13945 408 aa15.34■□□□□ 0.05
USP39-217ENST00000491659 PCK1P35558 622 aa15.34■□□□□ 0.05
USP39-217ENST00000491659 NDST2P52849 883 aa15.34■□□□□ 0.05
USP39-217ENST00000491659 SHC2P98077 582 aa15.34■□□□□ 0.05
USP39-217ENST00000491659 RAD51Q06609 339 aa15.34■□□□□ 0.05
USP39-217ENST00000491659 SERINC3Q13530 473 aa15.34■□□□□ 0.05
USP39-217ENST00000491659 PIGHQ14442 188 aaPredicted RBP15.34■□□□□ 0.05
USP39-217ENST00000491659 STAT4Q14765 748 aa15.34■□□□□ 0.05
USP39-217ENST00000491659 TRIP6Q15654 476 aaKnown RBP15.34■□□□□ 0.05
USP39-217ENST00000491659 PPP6R3Q5H9R7 873 aaPredicted RBP15.34■□□□□ 0.05
USP39-217ENST00000491659 KCNT1Q5JUK3 1230 aa15.34■□□□□ 0.05
USP39-217ENST00000491659 CCDC122Q5T0U0 273 aa15.34■□□□□ 0.05
USP39-217ENST00000491659 FBXL19Q6PCT2 694 aa15.34■□□□□ 0.05
USP39-217ENST00000491659 RFX8Q6ZV50 586 aa15.34■□□□□ 0.05
USP39-217ENST00000491659 HORMAD1Q86X24 394 aa15.34■□□□□ 0.05
USP39-217ENST00000491659 OR6K2Q8NGY2 324 aa15.34■□□□□ 0.05
USP39-217ENST00000491659 CAMK1GQ96NX5 476 aa15.34■□□□□ 0.05
USP39-217ENST00000491659 OSBPL1AQ9BXW6 950 aa15.34■□□□□ 0.05
USP39-217ENST00000491659 THAP2Q9H0W7 228 aa15.34■□□□□ 0.05
USP39-217ENST00000491659 ARHGAP20Q9P2F6 1191 aa15.34■□□□□ 0.05
USP39-217ENST00000491659 A0A1W2PR77 199 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms