RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 PPP2CBP62714 309 aa16.87■□□□□ 0.29
PDLIM2-217ENST00000491330 PPP2CAP67775 309 aa16.87■□□□□ 0.29
PDLIM2-217ENST00000491330 IL9RQ01113 521 aa16.87■□□□□ 0.29
PDLIM2-217ENST00000491330 KLHL30Q0D2K2 578 aa16.87■□□□□ 0.29
PDLIM2-217ENST00000491330 PTP4A2Q12974 167 aa16.87■□□□□ 0.29
PDLIM2-217ENST00000491330 PARP15Q460N3 678 aa16.87■□□□□ 0.29
PDLIM2-217ENST00000491330 CCDC157Q569K6 752 aa16.87■□□□□ 0.29
PDLIM2-217ENST00000491330 CFAP58Q5T655 872 aa16.87■□□□□ 0.29
PDLIM2-217ENST00000491330 TRNP1Q6NT89 227 aa16.87■□□□□ 0.29
PDLIM2-217ENST00000491330 PAF1Q8N7H5 531 aa16.87■□□□□ 0.29
PDLIM2-217ENST00000491330 PNPLA1Q8N8W4 532 aa16.87■□□□□ 0.29
PDLIM2-217ENST00000491330 KDF1Q8NAX2 398 aaPredicted RBP16.87■□□□□ 0.29
PDLIM2-217ENST00000491330 OR2AP1Q8NGE2 309 aa16.87■□□□□ 0.29
PDLIM2-217ENST00000491330 ZCCHC14Q8WYQ9 949 aaKnown RBP16.87■□□□□ 0.29
PDLIM2-217ENST00000491330 ARHGEF2Q92974 986 aaKnown RBP16.87■□□□□ 0.29
PDLIM2-217ENST00000491330 GDAP1L1Q96MZ0 367 aa16.87■□□□□ 0.29
PDLIM2-217ENST00000491330 ORAI3Q9BRQ5 295 aa16.87■□□□□ 0.29
PDLIM2-217ENST00000491330 C1QTNF7Q9BXJ2 289 aa16.87■□□□□ 0.29
PDLIM2-217ENST00000491330 AIPL1Q9NZN9 384 aa16.87■□□□□ 0.29
PDLIM2-217ENST00000491330 KLK13Q9UKR3 277 aa16.87■□□□□ 0.29
PDLIM2-217ENST00000491330 BZW2Q9Y6E2 419 aaKnown RBP16.87■□□□□ 0.29
PDLIM2-217ENST00000491330 A0A1W2PR77 199 aa16.86■□□□□ 0.29
PDLIM2-217ENST00000491330 NEMP2A6NFY4 417 aa16.86■□□□□ 0.29
PDLIM2-217ENST00000491330 TMCO5BA8MYB1 307 aa16.86■□□□□ 0.29
PDLIM2-217ENST00000491330 I6L893 689 aaPredicted RBP16.86■□□□□ 0.29
PDLIM2-217ENST00000491330 PLK4O00444 970 aa16.86■□□□□ 0.29
PDLIM2-217ENST00000491330 KRIT1O00522 736 aa16.86■□□□□ 0.29
PDLIM2-217ENST00000491330 CCP110O43303 1012 aa16.86■□□□□ 0.29
PDLIM2-217ENST00000491330 TSPAN6O43657 245 aa16.86■□□□□ 0.29
PDLIM2-217ENST00000491330 KDELR3O43731 214 aa16.86■□□□□ 0.29
PDLIM2-217ENST00000491330 GSRP00390 522 aa16.86■□□□□ 0.29
PDLIM2-217ENST00000491330 MYBL1P10243 752 aa16.86■□□□□ 0.29
PDLIM2-217ENST00000491330 ALPPL2P10696 532 aa16.86■□□□□ 0.29
PDLIM2-217ENST00000491330 PSMA2P25787 234 aa16.86■□□□□ 0.29
PDLIM2-217ENST00000491330 RXRGP48443 463 aa16.86■□□□□ 0.29
PDLIM2-217ENST00000491330 ZNF135P52742 658 aaPredicted RBP16.86■□□□□ 0.29
PDLIM2-217ENST00000491330 TPI1P60174 286 aa16.86■□□□□ 0.29
PDLIM2-217ENST00000491330 MAPK8IP2Q13387 824 aaPredicted RBP16.86■□□□□ 0.29
PDLIM2-217ENST00000491330 GRM3Q14832 879 aa16.86■□□□□ 0.29
PDLIM2-217ENST00000491330 INO80DQ53TQ3 878 aaPredicted RBP16.86■□□□□ 0.29
PDLIM2-217ENST00000491330 TMC6Q7Z403 805 aa16.86■□□□□ 0.29
PDLIM2-217ENST00000491330 RTL3Q8N8U3 475 aaKnown RBP16.86■□□□□ 0.29
PDLIM2-217ENST00000491330 CHST14Q8NCH0 376 aa16.86■□□□□ 0.29
PDLIM2-217ENST00000491330 CNDP2Q96KP4 475 aaKnown RBP16.86■□□□□ 0.29
PDLIM2-217ENST00000491330 TM6SF2Q9BZW4 377 aa16.86■□□□□ 0.29
PDLIM2-217ENST00000491330 EBF2Q9HAK2 575 aa16.86■□□□□ 0.29
PDLIM2-217ENST00000491330 WASF3Q9UPY6 502 aa16.86■□□□□ 0.29
PDLIM2-217ENST00000491330 FCF1Q9Y324 198 aaKnown RBP16.86■□□□□ 0.29
PDLIM2-217ENST00000491330 PCDHGA1Q9Y5H4 931 aa16.86■□□□□ 0.29
PDLIM2-217ENST00000491330 SLCO1B1Q9Y6L6 691 aa16.86■□□□□ 0.29
PDLIM2-217ENST00000491330 MUC22E2RYF6 1773 aaPredicted RBP16.86■□□□□ 0.29
PDLIM2-217ENST00000491330 PCDH15Q96QU1 1955 aa16.86■□□□□ 0.29
PDLIM2-217ENST00000491330 A0A1W2PQJ5 194 aa16.85■□□□□ 0.29
PDLIM2-217ENST00000491330 LRRC53A6NM62 1247 aa16.85■□□□□ 0.29
PDLIM2-217ENST00000491330 TEX33O43247 280 aa16.85■□□□□ 0.29
PDLIM2-217ENST00000491330 PRPSAP2O60256 369 aa16.85■□□□□ 0.29
PDLIM2-217ENST00000491330 ZMPSTE24O75844 475 aa16.85■□□□□ 0.29
PDLIM2-217ENST00000491330 GJB6O95452 261 aa16.85■□□□□ 0.29
PDLIM2-217ENST00000491330 TOP3BO95985 862 aaKnown RBP16.85■□□□□ 0.29
PDLIM2-217ENST00000491330 CTSLP07711 333 aa16.85■□□□□ 0.29
PDLIM2-217ENST00000491330 THEGLP0DJG4 465 aa16.85■□□□□ 0.29
PDLIM2-217ENST00000491330 GZMAP12544 262 aa16.85■□□□□ 0.29
PDLIM2-217ENST00000491330 ADRB3P13945 408 aa16.85■□□□□ 0.29
PDLIM2-217ENST00000491330 GLDCP23378 1020 aa16.85■□□□□ 0.29
PDLIM2-217ENST00000491330 EPHA8P29322 1005 aaPredicted RBP16.85■□□□□ 0.29
PDLIM2-217ENST00000491330 PRKCIP41743 596 aa16.85■□□□□ 0.29
PDLIM2-217ENST00000491330 UBASH3AP57075 661 aa16.85■□□□□ 0.29
PDLIM2-217ENST00000491330 RHOAP61586 193 aa16.85■□□□□ 0.29
PDLIM2-217ENST00000491330 ZNF805Q5CZA5 627 aa16.85■□□□□ 0.29
PDLIM2-217ENST00000491330 PRAMEF14Q5SWL7 426 aa16.85■□□□□ 0.29
PDLIM2-217ENST00000491330 PIP5KL1Q5T9C9 394 aa16.85■□□□□ 0.29
PDLIM2-217ENST00000491330 MANEALQ5VSG8 457 aa16.85■□□□□ 0.29
PDLIM2-217ENST00000491330 IRF2BP2Q7Z5L9 587 aa16.85■□□□□ 0.29
PDLIM2-217ENST00000491330 NLRP14Q86W24 1093 aa16.85■□□□□ 0.29
PDLIM2-217ENST00000491330 CCDC185Q8N715 623 aa16.85■□□□□ 0.29
PDLIM2-217ENST00000491330 BAP1Q92560 729 aa16.85■□□□□ 0.29
PDLIM2-217ENST00000491330 SYN2Q92777 582 aaPredicted RBP16.85■□□□□ 0.29
PDLIM2-217ENST00000491330 CALN1Q9BXU9 219 aa16.85■□□□□ 0.29
PDLIM2-217ENST00000491330 ARHGAP20Q9P2F6 1191 aa16.85■□□□□ 0.29
PDLIM2-217ENST00000491330 ZMIZ1Q9ULJ6 1067 aa16.85■□□□□ 0.29
PDLIM2-217ENST00000491330 FZD10Q9ULW2 581 aa16.85■□□□□ 0.29
PDLIM2-217ENST00000491330 HS3ST3A1Q9Y663 406 aa16.85■□□□□ 0.29
PDLIM2-217ENST00000491330 TPRP12270 2363 aaKnown RBP16.85■□□□□ 0.29
PDLIM2-217ENST00000491330 ACACBO00763 2458 aa16.85■□□□□ 0.29
PDLIM2-217ENST00000491330 DOCK4Q8N1I0 1966 aa16.84■□□□□ 0.29
PDLIM2-217ENST00000491330 ASCC3Q8N3C0 2202 aaKnown RBP16.84■□□□□ 0.29
PDLIM2-217ENST00000491330 ARHGAP42A6NI28 874 aa16.84■□□□□ 0.29
PDLIM2-217ENST00000491330 A6NNZ2 444 aa16.84■□□□□ 0.29
PDLIM2-217ENST00000491330 H3BM21 787 aa16.84■□□□□ 0.29
PDLIM2-217ENST00000491330 ENC1O14682 589 aa16.84■□□□□ 0.29
PDLIM2-217ENST00000491330 FPGTO14772 594 aa16.84■□□□□ 0.29
PDLIM2-217ENST00000491330 AP1G1O43747 822 aa16.84■□□□□ 0.29
PDLIM2-217ENST00000491330 WNT1P04628 370 aa16.84■□□□□ 0.29
PDLIM2-217ENST00000491330 ATXN1LP0C7T5 689 aaKnown RBP16.84■□□□□ 0.29
PDLIM2-217ENST00000491330 ACVRL1P37023 503 aa16.84■□□□□ 0.29
PDLIM2-217ENST00000491330 SUOXP51687 545 aa16.84■□□□□ 0.29
PDLIM2-217ENST00000491330 ARF5P84085 180 aa16.84■□□□□ 0.29
PDLIM2-217ENST00000491330 FANCCQ00597 558 aa16.84■□□□□ 0.29
PDLIM2-217ENST00000491330 MYLK3Q32MK0 819 aa16.84■□□□□ 0.29
PDLIM2-217ENST00000491330 GDPD4Q6W3E5 623 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms