RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 GANQ9H2C0 597 aa20.1■□□□□ 0.81
SREBF1-216ENST00000490796 SCUBE2Q9NQ36 999 aa20.1■□□□□ 0.81
SREBF1-216ENST00000490796 HECAQ9UBI9 543 aaPredicted RBP20.1■□□□□ 0.81
SREBF1-216ENST00000490796 WASF2Q9Y6W5 498 aa20.1■□□□□ 0.81
SREBF1-216ENST00000490796 LAMA5O15230 3695 aa20.1■□□□□ 0.81
SREBF1-216ENST00000490796 A6NNZ2 444 aa20.09■□□□□ 0.81
SREBF1-216ENST00000490796 NEMP1O14524 444 aa20.09■□□□□ 0.81
SREBF1-216ENST00000490796 SIGLEC6O43699 453 aa20.09■□□□□ 0.81
SREBF1-216ENST00000490796 ZMPSTE24O75844 475 aa20.09■□□□□ 0.81
SREBF1-216ENST00000490796 ADRB3P13945 408 aa20.09■□□□□ 0.81
SREBF1-216ENST00000490796 RHOQP17081 205 aa20.09■□□□□ 0.81
SREBF1-216ENST00000490796 MAPKAPK2P49137 400 aa20.09■□□□□ 0.81
SREBF1-216ENST00000490796 KLK7P49862 253 aa20.09■□□□□ 0.81
SREBF1-216ENST00000490796 CLDN2P57739 230 aa20.09■□□□□ 0.81
SREBF1-216ENST00000490796 E2F1Q01094 437 aa20.09■□□□□ 0.81
SREBF1-216ENST00000490796 FMO1Q01740 532 aa20.09■□□□□ 0.81
SREBF1-216ENST00000490796 SGCGQ13326 291 aa20.09■□□□□ 0.81
SREBF1-216ENST00000490796 ZNF211Q13398 564 aaPredicted RBP20.09■□□□□ 0.81
SREBF1-216ENST00000490796 CCDC14Q49A88 953 aa20.09■□□□□ 0.81
SREBF1-216ENST00000490796 KANSL1Q7Z3B3 1105 aa20.09■□□□□ 0.81
SREBF1-216ENST00000490796 DCP2Q8IU60 420 aaKnown RBP20.09■□□□□ 0.81
SREBF1-216ENST00000490796 LRIG1Q96JA1 1093 aa20.09■□□□□ 0.81
SREBF1-216ENST00000490796 SELENOOQ9BVL4 669 aa20.09■□□□□ 0.81
SREBF1-216ENST00000490796 SLC17A9Q9BYT1 436 aa20.09■□□□□ 0.81
SREBF1-216ENST00000490796 TM6SF2Q9BZW4 377 aa20.09■□□□□ 0.81
SREBF1-216ENST00000490796 RETREG1Q9H6L5 497 aa20.09■□□□□ 0.81
SREBF1-216ENST00000490796 SEPT11Q9NVA2 429 aaKnown RBP20.09■□□□□ 0.81
SREBF1-216ENST00000490796 EVA1BQ9NVM1 165 aa20.09■□□□□ 0.81
SREBF1-216ENST00000490796 IPO11Q9UI26 975 aaKnown RBP20.09■□□□□ 0.81
SREBF1-216ENST00000490796 DNAI1Q9UI46 699 aa20.09■□□□□ 0.81
SREBF1-216ENST00000490796 ANKRD62A6NC57 917 aa20.08■□□□□ 0.81
SREBF1-216ENST00000490796 FFAR2O15552 330 aa20.08■□□□□ 0.81
SREBF1-216ENST00000490796 KRT3P12035 628 aa20.08■□□□□ 0.81
SREBF1-216ENST00000490796 HOXB3P14651 431 aaPredicted RBP20.08■□□□□ 0.81
SREBF1-216ENST00000490796 DGKAP23743 735 aa20.08■□□□□ 0.81
SREBF1-216ENST00000490796 ACP1P24666 158 aa20.08■□□□□ 0.81
SREBF1-216ENST00000490796 ACVRL1P37023 503 aa20.08■□□□□ 0.81
SREBF1-216ENST00000490796 ARF5P84085 180 aa20.08■□□□□ 0.81
SREBF1-216ENST00000490796 SEMG2Q02383 582 aa20.08■□□□□ 0.81
SREBF1-216ENST00000490796 Q6ZSR6 202 aa20.08■□□□□ 0.81
SREBF1-216ENST00000490796 STRADAQ7RTN6 431 aa20.08■□□□□ 0.81
SREBF1-216ENST00000490796 ZSCAN30Q86W11 494 aa20.08■□□□□ 0.81
SREBF1-216ENST00000490796 NEK11Q8NG66 645 aa20.08■□□□□ 0.81
SREBF1-216ENST00000490796 ISG20Q96AZ6 181 aaKnown RBP20.08■□□□□ 0.81
SREBF1-216ENST00000490796 TBC1D31Q96DN5 1066 aa20.08■□□□□ 0.81
SREBF1-216ENST00000490796 OSBPL2Q9H1P3 480 aa20.08■□□□□ 0.81
SREBF1-216ENST00000490796 MAGEH1Q9H213 219 aa20.08■□□□□ 0.81
SREBF1-216ENST00000490796 DNAJC28Q9NX36 388 aa20.08■□□□□ 0.81
SREBF1-216ENST00000490796 ADAM22Q9P0K1 906 aa20.08■□□□□ 0.81
SREBF1-216ENST00000490796 ZNF212Q9UDV6 495 aa20.08■□□□□ 0.81
SREBF1-216ENST00000490796 ZFR2Q9UPR6 939 aaKnown RBP20.08■□□□□ 0.81
SREBF1-216ENST00000490796 FADS3Q9Y5Q0 445 aa20.08■□□□□ 0.81
SREBF1-216ENST00000490796 HS3ST3A1Q9Y663 406 aa20.08■□□□□ 0.81
SREBF1-216ENST00000490796 TRPM6Q9BX84 2022 aa20.08■□□□□ 0.8
SREBF1-216ENST00000490796 DOCK4Q8N1I0 1966 aa20.08■□□□□ 0.8
SREBF1-216ENST00000490796 ITPR1Q14643 2758 aa20.07■□□□□ 0.8
SREBF1-216ENST00000490796 ASXL3Q9C0F0 2248 aa20.07■□□□□ 0.8
SREBF1-216ENST00000490796 NEMP2A6NFY4 417 aa20.07■□□□□ 0.8
SREBF1-216ENST00000490796 C2CD4BA6NLJ0 364 aa20.07■□□□□ 0.8
SREBF1-216ENST00000490796 RNF103O00237 685 aa20.07■□□□□ 0.8
SREBF1-216ENST00000490796 TRIM38O00635 465 aa20.07■□□□□ 0.8
SREBF1-216ENST00000490796 RAMP2O60895 175 aa20.07■□□□□ 0.8
SREBF1-216ENST00000490796 ZNF821O75541 412 aaPredicted RBP20.07■□□□□ 0.8
SREBF1-216ENST00000490796 PAK4O96013 591 aaPredicted RBP20.07■□□□□ 0.8
SREBF1-216ENST00000490796 CALB1P05937 261 aa20.07■□□□□ 0.8
SREBF1-216ENST00000490796 PLEKP08567 350 aaPredicted RBP20.07■□□□□ 0.8
SREBF1-216ENST00000490796 CHRNB2P17787 502 aa20.07■□□□□ 0.8
SREBF1-216ENST00000490796 PTPN9P43378 593 aa20.07■□□□□ 0.8
SREBF1-216ENST00000490796 SNRPD1P62314 119 aaKnown RBP20.07■□□□□ 0.8
SREBF1-216ENST00000490796 NRG1Q02297 640 aaPredicted RBP20.07■□□□□ 0.8
SREBF1-216ENST00000490796 PROX2Q3B8N5 592 aa20.07■□□□□ 0.8
SREBF1-216ENST00000490796 TMEM259Q4ZIN3 620 aa20.07■□□□□ 0.8
SREBF1-216ENST00000490796 CDKAL1Q5VV42 579 aa20.07■□□□□ 0.8
SREBF1-216ENST00000490796 SASS6Q6UVJ0 657 aa20.07■□□□□ 0.8
SREBF1-216ENST00000490796 GCNT7Q6ZNI0 430 aa20.07■□□□□ 0.8
SREBF1-216ENST00000490796 LRRC69Q6ZNQ3 347 aa20.07■□□□□ 0.8
SREBF1-216ENST00000490796 SLC25A45Q8N413 288 aa20.07■□□□□ 0.8
SREBF1-216ENST00000490796 OR4C6Q8NH72 309 aa20.07■□□□□ 0.8
SREBF1-216ENST00000490796 JOSD2Q8TAC2 188 aa20.07■□□□□ 0.8
SREBF1-216ENST00000490796 GPT2Q8TD30 523 aa20.07■□□□□ 0.8
SREBF1-216ENST00000490796 FAM172AQ8WUF8 416 aa20.07■□□□□ 0.8
SREBF1-216ENST00000490796 IFT43Q96FT9 208 aa20.07■□□□□ 0.8
SREBF1-216ENST00000490796 TMEM248Q9NWD8 314 aa20.07■□□□□ 0.8
SREBF1-216ENST00000490796 CLCA2Q9UQC9 943 aa20.07■□□□□ 0.8
SREBF1-216ENST00000490796 FASNP49327 2511 aaKnown RBP20.07■□□□□ 0.8
SREBF1-216ENST00000490796 CELSR3Q9NYQ7 3312 aa20.06■□□□□ 0.8
SREBF1-216ENST00000490796 CXorf51AA0A1B0GTR3 108 aa20.06■□□□□ 0.8
SREBF1-216ENST00000490796 KRIT1O00522 736 aa20.06■□□□□ 0.8
SREBF1-216ENST00000490796 FPGTO14772 594 aa20.06■□□□□ 0.8
SREBF1-216ENST00000490796 AP1G1O43747 822 aa20.06■□□□□ 0.8
SREBF1-216ENST00000490796 PIAS2O75928 621 aa20.06■□□□□ 0.8
SREBF1-216ENST00000490796 DESP17661 470 aa20.06■□□□□ 0.8
SREBF1-216ENST00000490796 CDK11BP21127 795 aaKnown RBP20.06■□□□□ 0.8
SREBF1-216ENST00000490796 GPD1P21695 349 aa20.06■□□□□ 0.8
SREBF1-216ENST00000490796 ANP32AP39687 249 aaKnown RBP20.06■□□□□ 0.8
SREBF1-216ENST00000490796 JAM2P57087 298 aa20.06■□□□□ 0.8
SREBF1-216ENST00000490796 HNRNPKP61978 463 aaKnown RBP eCLIP20.06■□□□□ 0.82e-9■□□□□ 10
SREBF1-216ENST00000490796 COL9A2Q14055 689 aaPredicted RBP20.06■□□□□ 0.8
SREBF1-216ENST00000490796 PARS2Q7L3T8 475 aaKnown RBP20.06■□□□□ 0.8
SREBF1-216ENST00000490796 TMC6Q7Z403 805 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms