RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	CARD16	Q5EG05	197 aa		18.9	■□□□□ 0.62
C4A-256	ENST00000490663	DCAF12L1	Q5VU92	463 aa		18.9	■□□□□ 0.62
C4A-256	ENST00000490663	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	18.9	■□□□□ 0.62
C4A-256	ENST00000490663	KIAA1328	Q86T90	577 aa		18.9	■□□□□ 0.62
C4A-256	ENST00000490663	RGL4	Q8IZJ4	473 aa		18.9	■□□□□ 0.62
C4A-256	ENST00000490663	PCDH20	Q8N6Y1	951 aa	Known RBP	18.9	■□□□□ 0.62
C4A-256	ENST00000490663	PCDH19	Q8TAB3	1148 aa		18.9	■□□□□ 0.62
C4A-256	ENST00000490663	FAM71B	Q8TC56	605 aa		18.9	■□□□□ 0.62
C4A-256	ENST00000490663	SP110	Q9HB58	689 aa		18.9	■□□□□ 0.62
C4A-256	ENST00000490663	UBA2	Q9UBT2	640 aa	Predicted RBP	18.9	■□□□□ 0.62
C4A-256	ENST00000490663	IL36A	Q9UHA7	158 aa		18.9	■□□□□ 0.62
C4A-256	ENST00000490663	GOLGA6L6	A8MZA4	724 aa		18.89	■□□□□ 0.61
C4A-256	ENST00000490663	INSIG1	O15503	277 aa		18.89	■□□□□ 0.61
C4A-256	ENST00000490663	PRAMEF11	O60813	436 aa		18.89	■□□□□ 0.61
C4A-256	ENST00000490663	LEFTY1	O75610	366 aa		18.89	■□□□□ 0.61
C4A-256	ENST00000490663	GJB3	O75712	270 aa		18.89	■□□□□ 0.61
C4A-256	ENST00000490663	IPO7	O95373	1038 aa	Known RBP	18.89	■□□□□ 0.61
C4A-256	ENST00000490663	KRT7	P08729	469 aa		18.89	■□□□□ 0.61
C4A-256	ENST00000490663	C5AR1	P21730	350 aa		18.89	■□□□□ 0.61
C4A-256	ENST00000490663	KDELR1	P24390	212 aa		18.89	■□□□□ 0.61
C4A-256	ENST00000490663	OXTR	P30559	389 aa		18.89	■□□□□ 0.61
C4A-256	ENST00000490663	VAV2	P52735	878 aa		18.89	■□□□□ 0.61
C4A-256	ENST00000490663	RHOA	P61586	193 aa		18.89	■□□□□ 0.61
C4A-256	ENST00000490663	ZBTB16	Q05516	673 aa		18.89	■□□□□ 0.61
C4A-256	ENST00000490663	SLC20A2	Q08357	652 aa		18.89	■□□□□ 0.61
C4A-256	ENST00000490663	TCEAL1	Q15170	157 aa		18.89	■□□□□ 0.61
C4A-256	ENST00000490663	CYTH1	Q15438	398 aa		18.89	■□□□□ 0.61
C4A-256	ENST00000490663	ANKRD20A8P	Q5CZ79	823 aa		18.89	■□□□□ 0.61
C4A-256	ENST00000490663	FAM182A	Q5T1J6	154 aa		18.89	■□□□□ 0.61
C4A-256	ENST00000490663	NCBP2-AS2	Q69YL0	99 aa		18.89	■□□□□ 0.61
C4A-256	ENST00000490663	DSG4	Q86SJ6	1040 aa		18.89	■□□□□ 0.61
C4A-256	ENST00000490663	RNF25	Q96BH1	459 aa	Predicted RBP	18.89	■□□□□ 0.61
C4A-256	ENST00000490663	LOXL4	Q96JB6	756 aa		18.89	■□□□□ 0.61
C4A-256	ENST00000490663	CCDC114	Q96M63	670 aa		18.89	■□□□□ 0.61
C4A-256	ENST00000490663	CEP44	Q9C0F1	390 aa		18.89	■□□□□ 0.61
C4A-256	ENST00000490663	BTBD1	Q9H0C5	482 aa		18.89	■□□□□ 0.61
C4A-256	ENST00000490663	MIR1-1HG	Q9H1L0	117 aa		18.89	■□□□□ 0.61
C4A-256	ENST00000490663	LUC7L	Q9NQ29	371 aa	Known RBP	18.89	■□□□□ 0.61
C4A-256	ENST00000490663	RXFP3	Q9NSD7	469 aa		18.89	■□□□□ 0.61
C4A-256	ENST00000490663	HECA	Q9UBI9	543 aa	Predicted RBP	18.89	■□□□□ 0.61
C4A-256	ENST00000490663	EVL	Q9UI08	416 aa	Predicted RBP	18.89	■□□□□ 0.61
C4A-256	ENST00000490663	PPM1H	Q9ULR3	514 aa		18.89	■□□□□ 0.61
C4A-256	ENST00000490663	NCKAP1	Q9Y2A7	1128 aa		18.89	■□□□□ 0.61
C4A-256	ENST00000490663	MYLK	Q15746	1914 aa		18.88	■□□□□ 0.61
C4A-256	ENST00000490663	C1QTNF3-AMACR	E9PGA6	284 aa		18.88	■□□□□ 0.61
C4A-256	ENST00000490663	KRIT1	O00522	736 aa		18.88	■□□□□ 0.61
C4A-256	ENST00000490663	ALOX15B	O15296	676 aa		18.88	■□□□□ 0.61
C4A-256	ENST00000490663	GDF9	O60383	454 aa		18.88	■□□□□ 0.61
C4A-256	ENST00000490663	FSBP	O95073	299 aa		18.88	■□□□□ 0.61
C4A-256	ENST00000490663	C7	P10643	843 aa		18.88	■□□□□ 0.61
C4A-256	ENST00000490663	RGR	P47804	291 aa		18.88	■□□□□ 0.61
C4A-256	ENST00000490663	ZNF135	P52742	658 aa	Predicted RBP	18.88	■□□□□ 0.61
C4A-256	ENST00000490663	GEMIN4	P57678	1058 aa	Known RBP	18.88	■□□□□ 0.61
C4A-256	ENST00000490663	NCEH1	Q6PIU2	408 aa		18.88	■□□□□ 0.61
C4A-256	ENST00000490663	PRR23C	Q6ZRP0	262 aa		18.88	■□□□□ 0.61
C4A-256	ENST00000490663	PQLC3	Q8N755	202 aa		18.88	■□□□□ 0.61
C4A-256	ENST00000490663	OR14C36	Q8NHC7	312 aa		18.88	■□□□□ 0.61
C4A-256	ENST00000490663	TPCN2	Q8NHX9	752 aa		18.88	■□□□□ 0.61
C4A-256	ENST00000490663	IPO11	Q9UI26	975 aa	Known RBP	18.88	■□□□□ 0.61
C4A-256	ENST00000490663	LCMT1	Q9UIC8	334 aa		18.88	■□□□□ 0.61
C4A-256	ENST00000490663	FARP1	Q9Y4F1	1045 aa	Predicted RBP	18.88	■□□□□ 0.61
C4A-256	ENST00000490663	ALG6	Q9Y672	507 aa		18.88	■□□□□ 0.61
C4A-256	ENST00000490663	TTC24	A2A3L6	582 aa	Predicted RBP	18.87	■□□□□ 0.61
C4A-256	ENST00000490663	GOLGA6L3	A6NEY3	463 aa		18.87	■□□□□ 0.61
C4A-256	ENST00000490663	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	18.87	■□□□□ 0.61
C4A-256	ENST00000490663	C3orf70	A6NLC5	250 aa	Predicted RBP	18.87	■□□□□ 0.61
C4A-256	ENST00000490663	ADPRH	P54922	357 aa		18.87	■□□□□ 0.61
C4A-256	ENST00000490663	HADHB	P55084	474 aa	Known RBP	18.87	■□□□□ 0.61
C4A-256	ENST00000490663	NAP1L1	P55209	391 aa	Known RBP	18.87	■□□□□ 0.61
C4A-256	ENST00000490663	PPP2CB	P62714	309 aa		18.87	■□□□□ 0.61
C4A-256	ENST00000490663	PPP2CA	P67775	309 aa		18.87	■□□□□ 0.61
C4A-256	ENST00000490663	LRRC73	Q5JTD7	316 aa		18.87	■□□□□ 0.61
C4A-256	ENST00000490663	PLA2G2C	Q5R387	149 aa		18.87	■□□□□ 0.61
C4A-256	ENST00000490663	AGBL4	Q5VU57	503 aa		18.87	■□□□□ 0.61
C4A-256	ENST00000490663	USP30	Q70CQ3	517 aa		18.87	■□□□□ 0.61
C4A-256	ENST00000490663	ZCCHC9	Q8N567	271 aa	Known RBP	18.87	■□□□□ 0.61
C4A-256	ENST00000490663	OR2AP1	Q8NGE2	309 aa		18.87	■□□□□ 0.61
C4A-256	ENST00000490663	VOPP1	Q96AW1	172 aa		18.87	■□□□□ 0.61
C4A-256	ENST00000490663	ZNF419	Q96HQ0	510 aa	Predicted RBP	18.87	■□□□□ 0.61
C4A-256	ENST00000490663	HEPH	Q9BQS7	1158 aa		18.87	■□□□□ 0.61
C4A-256	ENST00000490663	ZNF670	Q9BS34	389 aa		18.87	■□□□□ 0.61
C4A-256	ENST00000490663	EIF2B4	Q9UI10	523 aa	Known RBP	18.87	■□□□□ 0.61
C4A-256	ENST00000490663	PILRB	Q9UKJ0	227 aa		18.87	■□□□□ 0.61
C4A-256	ENST00000490663	SCML1	Q9UN30	329 aa		18.87	■□□□□ 0.61
C4A-256	ENST00000490663		A0A0A6YYK5	440 aa	Predicted RBP	18.86	■□□□□ 0.61
C4A-256	ENST00000490663	MACROD2	A1Z1Q3	448 aa		18.86	■□□□□ 0.61
C4A-256	ENST00000490663	MUSK	O15146	869 aa		18.86	■□□□□ 0.61
C4A-256	ENST00000490663	PIGN	O95427	931 aa		18.86	■□□□□ 0.61
C4A-256	ENST00000490663	IGSF6	O95976	241 aa		18.86	■□□□□ 0.61
C4A-256	ENST00000490663	GSR	P00390	522 aa		18.86	■□□□□ 0.61
C4A-256	ENST00000490663	CFI	P05156	583 aa		18.86	■□□□□ 0.61
C4A-256	ENST00000490663	UGT2B4	P06133	528 aa		18.86	■□□□□ 0.61
C4A-256	ENST00000490663	GSDMD	P57764	484 aa		18.86	■□□□□ 0.61
C4A-256	ENST00000490663	SNRPD1	P62314	119 aa	Known RBP	18.86	■□□□□ 0.61
C4A-256	ENST00000490663	GBE1	Q04446	702 aa		18.86	■□□□□ 0.61
C4A-256	ENST00000490663	PDK2	Q15119	407 aa		18.86	■□□□□ 0.61
C4A-256	ENST00000490663	CSRP2	Q16527	193 aa		18.86	■□□□□ 0.61
C4A-256	ENST00000490663	PIP5KL1	Q5T9C9	394 aa		18.86	■□□□□ 0.61
C4A-256	ENST00000490663	FAM46C	Q5VWP2	391 aa		18.86	■□□□□ 0.61
C4A-256	ENST00000490663	LAYN	Q6UX15	382 aa		18.86	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms