RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 FAM90A12PA8MX19 464 aa5.2□□□□□ -1.58
HMGB1P38-201ENST00000490557 FAM90A23PA8MXZ1 464 aa5.2□□□□□ -1.58
HMGB1P38-201ENST00000490557 EYA2O00167 538 aa5.2□□□□□ -1.58
HMGB1P38-201ENST00000490557 TSPAN4O14817 238 aa5.2□□□□□ -1.58
HMGB1P38-201ENST00000490557 ENO3P13929 434 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P38-201ENST00000490557 POLD2P49005 469 aa5.2□□□□□ -1.58
HMGB1P38-201ENST00000490557 POLGP54098 1239 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P38-201ENST00000490557 RPP30P78346 268 aaKnown RBP5.2□□□□□ -1.58
HMGB1P38-201ENST00000490557 ME3Q16798 604 aa5.2□□□□□ -1.58
HMGB1P38-201ENST00000490557 FBXO43Q4G163 708 aa5.2□□□□□ -1.58
HMGB1P38-201ENST00000490557 Q6ZTK2 550 aa5.2□□□□□ -1.58
HMGB1P38-201ENST00000490557 CPXM2Q8N436 756 aa5.2□□□□□ -1.58
HMGB1P38-201ENST00000490557 C7orf57Q8NEG2 295 aa5.2□□□□□ -1.58
HMGB1P38-201ENST00000490557 RASSF8Q8NHQ8 419 aa5.2□□□□□ -1.58
HMGB1P38-201ENST00000490557 CEP76Q8TAP6 659 aa5.2□□□□□ -1.58
HMGB1P38-201ENST00000490557 TBC1D22AQ8WUA7 517 aa5.2□□□□□ -1.58
HMGB1P38-201ENST00000490557 RUFY2Q8WXA3 655 aa5.2□□□□□ -1.58
HMGB1P38-201ENST00000490557 EIF2AK1Q9BQI3 630 aaKnown RBP5.2□□□□□ -1.58
HMGB1P38-201ENST00000490557 LMAN2LQ9H0V9 348 aa5.2□□□□□ -1.58
HMGB1P38-201ENST00000490557 RBM38Q9H0Z9 239 aaKnown RBP5.2□□□□□ -1.58
HMGB1P38-201ENST00000490557 CATSPERBQ9H7T0 1116 aa5.2□□□□□ -1.58
HMGB1P38-201ENST00000490557 WASH6PQ9NQA3 447 aa5.2□□□□□ -1.58
HMGB1P38-201ENST00000490557 NCKIPSDQ9NZQ3 722 aa5.2□□□□□ -1.58
HMGB1P38-201ENST00000490557 PDP2Q9P2J9 529 aa5.2□□□□□ -1.58
HMGB1P38-201ENST00000490557 HDAC6Q9UBN7 1215 aa5.2□□□□□ -1.58
HMGB1P38-201ENST00000490557 ARHGAP26Q9UNA1 814 aa5.2□□□□□ -1.58
HMGB1P38-201ENST00000490557 CLDN16Q9Y5I7 305 aa5.2□□□□□ -1.58
HMGB1P38-201ENST00000490557 C17orf113A0A1B0GUU1 675 aa5.19□□□□□ -1.58
HMGB1P38-201ENST00000490557 FAM157AC9JC47 383 aa5.19□□□□□ -1.58
HMGB1P38-201ENST00000490557 HSPB6O14558 160 aa5.19□□□□□ -1.58
HMGB1P38-201ENST00000490557 SLC25A17O43808 307 aa5.19□□□□□ -1.58
HMGB1P38-201ENST00000490557 AGR2O95994 175 aa5.19□□□□□ -1.58
HMGB1P38-201ENST00000490557 CHRNB2P17787 502 aa5.19□□□□□ -1.58
HMGB1P38-201ENST00000490557 PAFAH1B1P43034 410 aa5.19□□□□□ -1.58
HMGB1P38-201ENST00000490557 ARSFP54793 590 aa5.19□□□□□ -1.58
HMGB1P38-201ENST00000490557 CDH12P55289 794 aa5.19□□□□□ -1.58
HMGB1P38-201ENST00000490557 CDH15P55291 814 aa5.19□□□□□ -1.58
HMGB1P38-201ENST00000490557 RPE65Q16518 533 aa5.19□□□□□ -1.58
HMGB1P38-201ENST00000490557 MMS22LQ6ZRQ5 1243 aa5.19□□□□□ -1.58
HMGB1P38-201ENST00000490557 PRSS45Q7RTY3 260 aa5.19□□□□□ -1.58
HMGB1P38-201ENST00000490557 MON1AQ86VX9 555 aa5.19□□□□□ -1.58
HMGB1P38-201ENST00000490557 TICAM2Q86XR7 235 aa5.19□□□□□ -1.58
HMGB1P38-201ENST00000490557 TMTC1Q8IUR5 882 aa5.19□□□□□ -1.58
HMGB1P38-201ENST00000490557 KDM1BQ8NB78 822 aa5.19□□□□□ -1.58
HMGB1P38-201ENST00000490557 GABPB2Q8TAK5 448 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P38-201ENST00000490557 BICD2Q8TD16 824 aa5.19□□□□□ -1.58
HMGB1P38-201ENST00000490557 GDPD5Q8WTR4 605 aa5.19□□□□□ -1.58
HMGB1P38-201ENST00000490557 NSMCE1Q8WV22 266 aa5.19□□□□□ -1.58
HMGB1P38-201ENST00000490557 SLC35F5Q8WV83 523 aa5.19□□□□□ -1.58
HMGB1P38-201ENST00000490557 HTRA1Q92743 480 aa5.19□□□□□ -1.58
HMGB1P38-201ENST00000490557 KIF1BPQ96EK5 621 aa5.19□□□□□ -1.58
HMGB1P38-201ENST00000490557 VCPIP1Q96JH7 1222 aa5.19□□□□□ -1.58
HMGB1P38-201ENST00000490557 GFM1Q96RP9 751 aaKnown RBP5.19□□□□□ -1.58
HMGB1P38-201ENST00000490557 WDR77Q9BQA1 342 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P38-201ENST00000490557 POLDIP3Q9BY77 421 aaKnown RBP5.19□□□□□ -1.58
HMGB1P38-201ENST00000490557 LHPPQ9H008 270 aa5.19□□□□□ -1.58
HMGB1P38-201ENST00000490557 VEZTQ9HBM0 779 aa5.19□□□□□ -1.58
HMGB1P38-201ENST00000490557 PEMTQ9UBM1 199 aa5.19□□□□□ -1.58
HMGB1P38-201ENST00000490557 GJD2Q9UKL4 321 aa5.19□□□□□ -1.58
HMGB1P38-201ENST00000490557 GOLGA6L10A0A0M3HER8 536 aa5.18□□□□□ -1.58
HMGB1P38-201ENST00000490557 TYW5A2RUC4 315 aaKnown RBP5.18□□□□□ -1.58
HMGB1P38-201ENST00000490557 TNFRSF1BP20333 461 aa5.18□□□□□ -1.58
HMGB1P38-201ENST00000490557 RASSF2P50749 326 aa5.18□□□□□ -1.58
HMGB1P38-201ENST00000490557 P2RX3P56373 397 aa5.18□□□□□ -1.58
HMGB1P38-201ENST00000490557 YWHAZP63104 245 aaKnown RBP5.18□□□□□ -1.58
HMGB1P38-201ENST00000490557 RUNX2Q13950 521 aa5.18□□□□□ -1.58
HMGB1P38-201ENST00000490557 CAMK1Q14012 370 aa5.18□□□□□ -1.58
HMGB1P38-201ENST00000490557 EPHA10Q5JZY3 1008 aa5.18□□□□□ -1.58
HMGB1P38-201ENST00000490557 ASPHD1Q5U4P2 390 aa5.18□□□□□ -1.58
HMGB1P38-201ENST00000490557 OTUD1Q5VV17 481 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P38-201ENST00000490557 DCAF12L2Q5VW00 463 aa5.18□□□□□ -1.58
HMGB1P38-201ENST00000490557 TBC1D9BQ66K14 1250 aa5.18□□□□□ -1.58
HMGB1P38-201ENST00000490557 TMEM71Q6P5X7 295 aa5.18□□□□□ -1.58
HMGB1P38-201ENST00000490557 LVRNQ6Q4G3 990 aa5.18□□□□□ -1.58
HMGB1P38-201ENST00000490557 RRM2BQ7LG56 351 aa5.18□□□□□ -1.58
HMGB1P38-201ENST00000490557 CTU1Q7Z7A3 348 aaKnown RBP5.18□□□□□ -1.58
HMGB1P38-201ENST00000490557 HEATR4Q86WZ0 1026 aa5.18□□□□□ -1.58
HMGB1P38-201ENST00000490557 TCP11L2Q8N4U5 519 aa5.18□□□□□ -1.58
HMGB1P38-201ENST00000490557 ZCCHC10Q8TBK6 192 aa5.18□□□□□ -1.58
HMGB1P38-201ENST00000490557 INPP5DQ92835 1189 aa5.18□□□□□ -1.58
HMGB1P38-201ENST00000490557 APOPT1Q96IL0 206 aa5.18□□□□□ -1.58
HMGB1P38-201ENST00000490557 PHF7Q9BWX1 381 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P38-201ENST00000490557 BEX4Q9NWD9 120 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P38-201ENST00000490557 BABAM1Q9NWV8 329 aa5.18□□□□□ -1.58
HMGB1P38-201ENST00000490557 PCDHGB5Q9Y5G0 923 aa5.18□□□□□ -1.58
HMGB1P38-201ENST00000490557 FAM90A10PA6NDY2 464 aa5.17□□□□□ -1.58
HMGB1P38-201ENST00000490557 CD8B2A6NJW9 211 aa5.17□□□□□ -1.58
HMGB1P38-201ENST00000490557 TNPO2O14787 897 aaKnown RBP5.17□□□□□ -1.58
HMGB1P38-201ENST00000490557 POU1F1P28069 291 aa5.17□□□□□ -1.58
HMGB1P38-201ENST00000490557 GGT5P36269 586 aa5.17□□□□□ -1.58
HMGB1P38-201ENST00000490557 PPP3CCP48454 512 aa5.17□□□□□ -1.58
HMGB1P38-201ENST00000490557 BLKP51451 505 aa5.17□□□□□ -1.58
HMGB1P38-201ENST00000490557 GALNT2Q10471 571 aa5.17□□□□□ -1.58
HMGB1P38-201ENST00000490557 CCDC70Q6NSX1 233 aa5.17□□□□□ -1.58
HMGB1P38-201ENST00000490557 TRIM74Q86UV6 250 aa5.17□□□□□ -1.58
HMGB1P38-201ENST00000490557 TRIM73Q86UV7 250 aa5.17□□□□□ -1.58
HMGB1P38-201ENST00000490557 LURAP1LQ8IV03 231 aa5.17□□□□□ -1.58
HMGB1P38-201ENST00000490557 CADM3Q8N126 398 aa5.17□□□□□ -1.58
HMGB1P38-201ENST00000490557 OTULINQ96BN8 352 aa5.17□□□□□ -1.58
HMGB1P38-201ENST00000490557 RNF183Q96D59 192 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms