RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 HDAC8Q9BY41 377 aa17.78■□□□□ 0.44
SEC13-218ENST00000490283 MAGEB5Q9BZ81 275 aa17.78■□□□□ 0.44
SEC13-218ENST00000490283 TM6SF2Q9BZW4 377 aa17.78■□□□□ 0.44
SEC13-218ENST00000490283 ZDHHC6Q9H6R6 413 aa17.78■□□□□ 0.44
SEC13-218ENST00000490283 EBF2Q9HAK2 575 aa17.78■□□□□ 0.44
SEC13-218ENST00000490283 MYO1AQ9UBC5 1043 aa17.78■□□□□ 0.44
SEC13-218ENST00000490283 HECAQ9UBI9 543 aaPredicted RBP17.78■□□□□ 0.44
SEC13-218ENST00000490283 AP4E1Q9UPM8 1137 aa17.78■□□□□ 0.44
SEC13-218ENST00000490283 LUC7L2Q9Y383 392 aaKnown RBP17.78■□□□□ 0.44
SEC13-218ENST00000490283 LAMA1P25391 3075 aa17.77■□□□□ 0.44
SEC13-218ENST00000490283 PRAMEF26H0Y7S4 382 aa17.77■□□□□ 0.44
SEC13-218ENST00000490283 H0Y8X5 98 aa17.77■□□□□ 0.44
SEC13-218ENST00000490283 YKT6O15498 198 aa17.77■□□□□ 0.44
SEC13-218ENST00000490283 DAPK3O43293 454 aa17.77■□□□□ 0.44
SEC13-218ENST00000490283 KDELR3O43731 214 aa17.77■□□□□ 0.44
SEC13-218ENST00000490283 PRPSAP2O60256 369 aa17.77■□□□□ 0.44
SEC13-218ENST00000490283 RNGTTO60942 597 aaKnown RBP17.77■□□□□ 0.44
SEC13-218ENST00000490283 PCDH8O95206 1070 aa17.77■□□□□ 0.44
SEC13-218ENST00000490283 GRK6P43250 576 aa17.77■□□□□ 0.44
SEC13-218ENST00000490283 ZBED6P86452 979 aa17.77■□□□□ 0.44
SEC13-218ENST00000490283 OGDHQ02218 1023 aa17.77■□□□□ 0.44
SEC13-218ENST00000490283 RAD51Q06609 339 aa17.77■□□□□ 0.44
SEC13-218ENST00000490283 FBXL19Q6PCT2 694 aa17.77■□□□□ 0.44
SEC13-218ENST00000490283 PLPP6Q8IY26 295 aa17.77■□□□□ 0.44
SEC13-218ENST00000490283 OXR1Q8N573 874 aa17.77■□□□□ 0.44
SEC13-218ENST00000490283 RHBDD1Q8TEB9 315 aa17.77■□□□□ 0.44
SEC13-218ENST00000490283 FNIP1Q8TF40 1166 aa17.77■□□□□ 0.44
SEC13-218ENST00000490283 CPLX3Q8WVH0 158 aa17.77■□□□□ 0.44
SEC13-218ENST00000490283 CASKIN2Q8WXE0 1202 aa17.77■□□□□ 0.44
SEC13-218ENST00000490283 ARRDC3Q96B67 414 aa17.77■□□□□ 0.44
SEC13-218ENST00000490283 LRIG1Q96JA1 1093 aa17.77■□□□□ 0.44
SEC13-218ENST00000490283 ELF4Q99607 663 aaPredicted RBP17.77■□□□□ 0.44
SEC13-218ENST00000490283 CDC6Q99741 560 aa17.77■□□□□ 0.44
SEC13-218ENST00000490283 DHX35Q9H5Z1 703 aaKnown RBP17.77■□□□□ 0.44
SEC13-218ENST00000490283 IFNKQ9P0W0 207 aa17.77■□□□□ 0.44
SEC13-218ENST00000490283 PCOLCE2Q9UKZ9 415 aa17.77■□□□□ 0.44
SEC13-218ENST00000490283 APOBEC2Q9Y235 224 aaKnown RBP17.77■□□□□ 0.44
SEC13-218ENST00000490283 WASF2Q9Y6W5 498 aa17.77■□□□□ 0.44
SEC13-218ENST00000490283 NYNRINQ9P2P1 1898 aaKnown RBP17.77■□□□□ 0.43
SEC13-218ENST00000490283 TMEM191CA6NGB0 347 aa17.76■□□□□ 0.43
SEC13-218ENST00000490283 WASH4PA8MWX3 477 aa17.76■□□□□ 0.43
SEC13-218ENST00000490283 EEF2KO00418 725 aaKnown RBP17.76■□□□□ 0.43
SEC13-218ENST00000490283 KCNK3O14649 394 aa17.76■□□□□ 0.43
SEC13-218ENST00000490283 GSRP00390 522 aa17.76■□□□□ 0.43
SEC13-218ENST00000490283 SERPING1P05155 500 aa17.76■□□□□ 0.43
SEC13-218ENST00000490283 ITGB7P26010 798 aa17.76■□□□□ 0.43
SEC13-218ENST00000490283 ARRB1P49407 418 aaPredicted RBP17.76■□□□□ 0.43
SEC13-218ENST00000490283 OVGP1Q12889 678 aa17.76■□□□□ 0.43
SEC13-218ENST00000490283 ERMARDQ5T6L9 678 aa17.76■□□□□ 0.43
SEC13-218ENST00000490283 IQCHQ86VS3 1027 aa17.76■□□□□ 0.43
SEC13-218ENST00000490283 HORMAD1Q86X24 394 aa17.76■□□□□ 0.43
SEC13-218ENST00000490283 MFSD2AQ8NA29 543 aa17.76■□□□□ 0.43
SEC13-218ENST00000490283 OR2AP1Q8NGE2 309 aa17.76■□□□□ 0.43
SEC13-218ENST00000490283 GDAP1L1Q96MZ0 367 aa17.76■□□□□ 0.43
SEC13-218ENST00000490283 PCSK1NQ9UHG2 260 aa17.76■□□□□ 0.43
SEC13-218ENST00000490283 CAPN11Q9UMQ6 739 aa17.76■□□□□ 0.43
SEC13-218ENST00000490283 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.76■□□□□ 0.431e-7■□□□□ 8.8
SEC13-218ENST00000490283 A0A1W2PQU0 124 aa17.75■□□□□ 0.43
SEC13-218ENST00000490283 A0A1W2PR77 199 aa17.75■□□□□ 0.43
SEC13-218ENST00000490283 C10orf142B7Z368 130 aa17.75■□□□□ 0.43
SEC13-218ENST00000490283 RASA4BC9J798 803 aa17.75■□□□□ 0.43
SEC13-218ENST00000490283 TLR4O00206 839 aa17.75■□□□□ 0.43
SEC13-218ENST00000490283 KRIT1O00522 736 aa17.75■□□□□ 0.43
SEC13-218ENST00000490283 RASA4O43374 803 aa17.75■□□□□ 0.43
SEC13-218ENST00000490283 PCDHGA12O60330 932 aa17.75■□□□□ 0.43
SEC13-218ENST00000490283 ZNF821O75541 412 aaPredicted RBP17.75■□□□□ 0.43
SEC13-218ENST00000490283 POP4O95707 220 aaKnown RBP17.75■□□□□ 0.43
SEC13-218ENST00000490283 IGSF6O95976 241 aa17.75■□□□□ 0.43
SEC13-218ENST00000490283 WNT1P04628 370 aa17.75■□□□□ 0.43
SEC13-218ENST00000490283 AKT2P31751 481 aa17.75■□□□□ 0.43
SEC13-218ENST00000490283 PBX1P40424 430 aa17.75■□□□□ 0.43
SEC13-218ENST00000490283 ZNF135P52742 658 aaPredicted RBP17.75■□□□□ 0.43
SEC13-218ENST00000490283 TAS2R38P59533 333 aa17.75■□□□□ 0.43
SEC13-218ENST00000490283 FAM193AP78312 1265 aa17.75■□□□□ 0.43
SEC13-218ENST00000490283 NFKBIBQ15653 356 aa17.75■□□□□ 0.43
SEC13-218ENST00000490283 LEKR1Q6ZMV7 388 aa17.75■□□□□ 0.43
SEC13-218ENST00000490283 DNAAF5Q86Y56 855 aa17.75■□□□□ 0.43
SEC13-218ENST00000490283 PSTKQ8IV42 348 aaKnown RBP17.75■□□□□ 0.43
SEC13-218ENST00000490283 UMODL1-AS1Q8N2C9 162 aa17.75■□□□□ 0.43
SEC13-218ENST00000490283 OSBPL1AQ9BXW6 950 aa17.75■□□□□ 0.43
SEC13-218ENST00000490283 ISCUQ9H1K1 167 aa17.75■□□□□ 0.43
SEC13-218ENST00000490283 GPATCH2LQ9NWQ4 482 aa17.75■□□□□ 0.43
SEC13-218ENST00000490283 ARHGAP20Q9P2F6 1191 aa17.75■□□□□ 0.43
SEC13-218ENST00000490283 ACTL7AQ9Y615 435 aa17.75■□□□□ 0.43
SEC13-218ENST00000490283 DOCK4Q8N1I0 1966 aa17.75■□□□□ 0.43
SEC13-218ENST00000490283 A0A1B0GTQ1 180 aa17.74■□□□□ 0.43
SEC13-218ENST00000490283 NEMP1O14524 444 aa17.74■□□□□ 0.43
SEC13-218ENST00000490283 SLC31A1O15431 190 aa17.74■□□□□ 0.43
SEC13-218ENST00000490283 CBFA2T2O43439 604 aa17.74■□□□□ 0.43
SEC13-218ENST00000490283 TMCC1O94876 653 aa17.74■□□□□ 0.43
SEC13-218ENST00000490283 CD160O95971 181 aa17.74■□□□□ 0.43
SEC13-218ENST00000490283 ADRB3P13945 408 aa17.74■□□□□ 0.43
SEC13-218ENST00000490283 NDST2P52849 883 aa17.74■□□□□ 0.43
SEC13-218ENST00000490283 NXPH1P58417 271 aa17.74■□□□□ 0.43
SEC13-218ENST00000490283 RHOAP61586 193 aa17.74■□□□□ 0.43
SEC13-218ENST00000490283 IL9RQ01113 521 aa17.74■□□□□ 0.43
SEC13-218ENST00000490283 ACAP1Q15027 740 aa17.74■□□□□ 0.43
SEC13-218ENST00000490283 INO80DQ53TQ3 878 aaPredicted RBP17.74■□□□□ 0.43
SEC13-218ENST00000490283 KCNT1Q5JUK3 1230 aa17.74■□□□□ 0.43
SEC13-218ENST00000490283 KIAA1161Q6NSJ0 714 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms