RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 FAM170AA1A519 330 aa9.92□□□□□ -0.82
TMEM39A-210ENST00000490099 WASH4PA8MWX3 477 aa9.92□□□□□ -0.82
TMEM39A-210ENST00000490099 PRAMEF26H0Y7S4 382 aa9.92□□□□□ -0.82
TMEM39A-210ENST00000490099 CBX4O00257 560 aa9.92□□□□□ -0.82
TMEM39A-210ENST00000490099 YKT6O15498 198 aa9.92□□□□□ -0.82
TMEM39A-210ENST00000490099 TEX33O43247 280 aa9.92□□□□□ -0.82
TMEM39A-210ENST00000490099 CALB1P05937 261 aa9.92□□□□□ -0.82
TMEM39A-210ENST00000490099 FERP16591 822 aa9.92□□□□□ -0.82
TMEM39A-210ENST00000490099 ACVRL1P37023 503 aa9.92□□□□□ -0.82
TMEM39A-210ENST00000490099 ETFBP38117 255 aa9.92□□□□□ -0.82
TMEM39A-210ENST00000490099 C21orf59P57076 290 aa9.92□□□□□ -0.82
TMEM39A-210ENST00000490099 CCDC15Q0P6D6 951 aa9.92□□□□□ -0.82
TMEM39A-210ENST00000490099 TMEM259Q4ZIN3 620 aa9.92□□□□□ -0.82
TMEM39A-210ENST00000490099 CARD16Q5EG05 197 aa9.92□□□□□ -0.82
TMEM39A-210ENST00000490099 PRAMEF14Q5SWL7 426 aa9.92□□□□□ -0.82
TMEM39A-210ENST00000490099 ACAD10Q6JQN1 1059 aa9.92□□□□□ -0.82
TMEM39A-210ENST00000490099 ERN2Q76MJ5 926 aaKnown RBP9.92□□□□□ -0.82
TMEM39A-210ENST00000490099 PHLDB2Q86SQ0 1253 aa9.92□□□□□ -0.82
TMEM39A-210ENST00000490099 MCOLN2Q8IZK6 566 aa9.92□□□□□ -0.82
TMEM39A-210ENST00000490099 CCDC185Q8N715 623 aa9.92□□□□□ -0.82
TMEM39A-210ENST00000490099 PNPLA1Q8N8W4 532 aa9.92□□□□□ -0.82
TMEM39A-210ENST00000490099 FAM172AQ8WUF8 416 aa9.92□□□□□ -0.82
TMEM39A-210ENST00000490099 ARHGEF2Q92974 986 aaKnown RBP9.92□□□□□ -0.82
TMEM39A-210ENST00000490099 LRIG1Q96JA1 1093 aa9.92□□□□□ -0.82
TMEM39A-210ENST00000490099 CCDC114Q96M63 670 aa9.92□□□□□ -0.82
TMEM39A-210ENST00000490099 CNPY3Q9BT09 278 aa9.92□□□□□ -0.82
TMEM39A-210ENST00000490099 FUCA2Q9BTY2 467 aa9.92□□□□□ -0.82
TMEM39A-210ENST00000490099 SPON2Q9BUD6 331 aa9.92□□□□□ -0.82
TMEM39A-210ENST00000490099 GDF3Q9NR23 364 aa9.92□□□□□ -0.82
TMEM39A-210ENST00000490099 GPR27Q9NS67 375 aa9.92□□□□□ -0.82
TMEM39A-210ENST00000490099 AIPL1Q9NZN9 384 aa9.92□□□□□ -0.82
TMEM39A-210ENST00000490099 ZMIZ1Q9ULJ6 1067 aa9.92□□□□□ -0.82
TMEM39A-210ENST00000490099 PCDHGA10Q9Y5H3 936 aa9.92□□□□□ -0.82
TMEM39A-210ENST00000490099 PCDHGA1Q9Y5H4 931 aa9.92□□□□□ -0.82
TMEM39A-210ENST00000490099 ANKRD11Q6UB99 2663 aaPredicted RBP9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 COL5A1P20908 1838 aaPredicted RBP9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 A0A1W2PQC6 194 aa9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 A0A1W2PQU0 124 aa9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 TAF4O00268 1085 aa9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 KPNA3O00505 521 aaPredicted RBP9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 KDELR3O43731 214 aa9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 AP1G1O43747 822 aa9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 MAGEC1O60732 1142 aa9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 LEFTY1O75610 366 aa9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 CCDC172P0C7W6 258 aa9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 CDK11BP21127 795 aaKnown RBP9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 GPD1P21695 349 aa9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 ITGB7P26010 798 aa9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 EPHA8P29322 1005 aaPredicted RBP9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 PRKCIP41743 596 aa9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 AIF1P55008 147 aa9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 RPL7AP62424 266 aaKnown RBP9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 OGDHQ02218 1023 aa9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 MAMLD1Q13495 774 aa9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 NR1I3Q14994 352 aa9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 SMAD1Q15797 465 aaKnown RBP9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 CDO1Q16878 200 aa9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 POM121L1PQ3SYA9 428 aa9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 SETMARQ53H47 684 aaPredicted RBP9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 SLC45A4Q5BKX6 768 aa9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 PLEKHA7Q6IQ23 1121 aa9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 ADAT2Q7Z6V5 191 aaKnown RBP9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 ABI3BPQ7Z7G0 1075 aa9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 HORMAD1Q86X24 394 aa9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 DRC7Q8IY82 874 aa9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 OXR1Q8N573 874 aa9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 AOPEPQ8N6M6 819 aa9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 ASB12Q8WXK4 309 aa9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 TBC1D31Q96DN5 1066 aa9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 HEPHQ9BQS7 1158 aa9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 EDEM3Q9BZQ6 932 aa9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 TTYH3Q9C0H2 523 aa9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 NAT10Q9H0A0 1025 aaKnown RBP9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 TNKS2Q9H2K2 1166 aa9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 ATP13A1Q9HD20 1204 aa9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 AASDHPPTQ9NRN7 309 aa9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 DKK4Q9UBT3 224 aa9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 IL36AQ9UHA7 158 aa9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 ZFR2Q9UPR6 939 aaKnown RBP9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 MFHAS1Q9Y4C4 1052 aa9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 FADS3Q9Y5Q0 445 aa9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 DMXL2Q8TDJ6 3036 aa9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 FAM208BQ5VWN6 2430 aa9.91□□□□□ -0.82
TMEM39A-210ENST00000490099 PTPRBP23467 1997 aa9.9□□□□□ -0.82
TMEM39A-210ENST00000490099 A0A1B0GTH6 734 aa9.9□□□□□ -0.82
TMEM39A-210ENST00000490099 SRRM3A6NNA2 597 aaPredicted RBP9.9□□□□□ -0.82
TMEM39A-210ENST00000490099 POP4O95707 220 aaKnown RBP9.9□□□□□ -0.82
TMEM39A-210ENST00000490099 C1SP09871 688 aa9.9□□□□□ -0.82
TMEM39A-210ENST00000490099 GZMAP12544 262 aa9.9□□□□□ -0.82
TMEM39A-210ENST00000490099 MAT2AP31153 395 aaKnown RBP9.9□□□□□ -0.82
TMEM39A-210ENST00000490099 RECQLP46063 649 aaPredicted RBP9.9□□□□□ -0.82
TMEM39A-210ENST00000490099 ARRB1P49407 418 aaPredicted RBP9.9□□□□□ -0.82
TMEM39A-210ENST00000490099 CCNHP51946 323 aaPredicted RBP9.9□□□□□ -0.82
TMEM39A-210ENST00000490099 GEMIN4P57678 1058 aaKnown RBP9.9□□□□□ -0.82
TMEM39A-210ENST00000490099 YBEYP58557 167 aaPredicted RBP9.9□□□□□ -0.82
TMEM39A-210ENST00000490099 FGL2Q14314 439 aa9.9□□□□□ -0.82
TMEM39A-210ENST00000490099 STAT4Q14765 748 aa9.9□□□□□ -0.82
TMEM39A-210ENST00000490099 IQCB1Q15051 598 aa9.9□□□□□ -0.82
TMEM39A-210ENST00000490099 KLHL40Q2TBA0 621 aa9.9□□□□□ -0.82
TMEM39A-210ENST00000490099 INAVAQ3KP66 663 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms