RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 AMACRQ9UHK6 382 aa11.27□□□□□ -0.61
CPSF7-212ENST00000489728 MBD1Q9UIS9 605 aaPredicted RBP11.27□□□□□ -0.61
CPSF7-212ENST00000489728 CYP8B1Q9UNU6 501 aa11.27□□□□□ -0.61
CPSF7-212ENST00000489728 TFR2Q9UP52 801 aa11.27□□□□□ -0.61
CPSF7-212ENST00000489728 EFR3BQ9Y2G0 817 aa11.27□□□□□ -0.61
CPSF7-212ENST00000489728 FCF1Q9Y324 198 aaKnown RBP11.27□□□□□ -0.61
CPSF7-212ENST00000489728 PCDHA3Q9Y5H8 950 aa11.27□□□□□ -0.61
CPSF7-212ENST00000489728 DUSP10Q9Y6W6 482 aa11.27□□□□□ -0.61
CPSF7-212ENST00000489728 MACROD2A1Z1Q3 448 aa11.26□□□□□ -0.61
CPSF7-212ENST00000489728 GRID2IPA4D2P6 1211 aa11.26□□□□□ -0.61
CPSF7-212ENST00000489728 J3KR12 359 aa11.26□□□□□ -0.61
CPSF7-212ENST00000489728 APOL1O14791 398 aa11.26□□□□□ -0.61
CPSF7-212ENST00000489728 MID1O15344 667 aa11.26□□□□□ -0.61
CPSF7-212ENST00000489728 MFSD11O43934 449 aa11.26□□□□□ -0.61
CPSF7-212ENST00000489728 GFRA3O60609 400 aa11.26□□□□□ -0.61
CPSF7-212ENST00000489728 MAFKO60675 156 aa11.26□□□□□ -0.61
CPSF7-212ENST00000489728 ZRANB2O95218 330 aaKnown RBP eCLIP11.26□□□□□ -0.61
CPSF7-212ENST00000489728 POP4O95707 220 aaKnown RBP11.26□□□□□ -0.61
CPSF7-212ENST00000489728 BCKDHBP21953 392 aa11.26□□□□□ -0.61
CPSF7-212ENST00000489728 ITGB7P26010 798 aa11.26□□□□□ -0.61
CPSF7-212ENST00000489728 PTPN7P35236 360 aa11.26□□□□□ -0.61
CPSF7-212ENST00000489728 GARSP41250 739 aaKnown RBP11.26□□□□□ -0.61
CPSF7-212ENST00000489728 CDKN2BP42772 138 aa11.26□□□□□ -0.61
CPSF7-212ENST00000489728 PSMD8P48556 350 aa11.26□□□□□ -0.61
CPSF7-212ENST00000489728 NR2C2P49116 596 aa11.26□□□□□ -0.61
CPSF7-212ENST00000489728 NUMBP49757 651 aa11.26□□□□□ -0.61
CPSF7-212ENST00000489728 RENBPP51606 427 aa11.26□□□□□ -0.61
CPSF7-212ENST00000489728 CCNHP51946 323 aaPredicted RBP11.26□□□□□ -0.61
CPSF7-212ENST00000489728 RPL6Q02878 288 aaKnown RBP11.26□□□□□ -0.61
CPSF7-212ENST00000489728 NSUN2Q08J23 767 aaKnown RBP eCLIP11.26□□□□□ -0.61
CPSF7-212ENST00000489728 GSE1Q14687 1217 aa11.26□□□□□ -0.61
CPSF7-212ENST00000489728 RALGPS1Q5JS13 557 aa11.26□□□□□ -0.61
CPSF7-212ENST00000489728 PEAR1Q5VY43 1037 aaPredicted RBP11.26□□□□□ -0.61
CPSF7-212ENST00000489728 DPY19L3Q6ZPD9 716 aa11.26□□□□□ -0.61
CPSF7-212ENST00000489728 BZW1Q7L1Q6 419 aaKnown RBP11.26□□□□□ -0.61
CPSF7-212ENST00000489728 ASCL5Q7RTU5 278 aa11.26□□□□□ -0.61
CPSF7-212ENST00000489728 ZSCAN30Q86W11 494 aa11.26□□□□□ -0.61
CPSF7-212ENST00000489728 BBS5Q8N3I7 341 aa11.26□□□□□ -0.61
CPSF7-212ENST00000489728 PQLC3Q8N755 202 aa11.26□□□□□ -0.61
CPSF7-212ENST00000489728 PIP4K2CQ8TBX8 421 aa11.26□□□□□ -0.61
CPSF7-212ENST00000489728 HCAR2Q8TDS4 363 aa11.26□□□□□ -0.61
CPSF7-212ENST00000489728 NSMCE1Q8WV22 266 aa11.26□□□□□ -0.61
CPSF7-212ENST00000489728 HDAC11Q96DB2 347 aa11.26□□□□□ -0.61
CPSF7-212ENST00000489728 TOE1Q96GM8 510 aaKnown RBP11.26□□□□□ -0.61
CPSF7-212ENST00000489728 ZNF419Q96HQ0 510 aaPredicted RBP11.26□□□□□ -0.61
CPSF7-212ENST00000489728 PSKH2Q96QS6 385 aa11.26□□□□□ -0.61
CPSF7-212ENST00000489728 TUBGCP5Q96RT8 1024 aa11.26□□□□□ -0.61
CPSF7-212ENST00000489728 PHOX2BQ99453 314 aa11.26□□□□□ -0.61
CPSF7-212ENST00000489728 OMDQ99983 421 aa11.26□□□□□ -0.61
CPSF7-212ENST00000489728 MAK16Q9BXY0 300 aaKnown RBP11.26□□□□□ -0.61
CPSF7-212ENST00000489728 HDAC8Q9BY41 377 aa11.26□□□□□ -0.61
CPSF7-212ENST00000489728 CPEB1Q9BZB8 566 aaKnown RBP11.26□□□□□ -0.61
CPSF7-212ENST00000489728 BRD8Q9H0E9 1235 aa11.26□□□□□ -0.61
CPSF7-212ENST00000489728 TNKS2Q9H2K2 1166 aa11.26□□□□□ -0.61
CPSF7-212ENST00000489728 DYRK4Q9NR20 520 aa11.26□□□□□ -0.61
CPSF7-212ENST00000489728 KLHL11Q9NVR0 708 aa11.26□□□□□ -0.61
CPSF7-212ENST00000489728 FBXL12Q9NXK8 326 aa11.26□□□□□ -0.61
CPSF7-212ENST00000489728 NCDNQ9UBB6 729 aa11.26□□□□□ -0.61
CPSF7-212ENST00000489728 LHX3Q9UBR4 397 aa11.26□□□□□ -0.61
CPSF7-212ENST00000489728 SEPT3Q9UH03 358 aa11.26□□□□□ -0.61
CPSF7-212ENST00000489728 WASF2Q9Y6W5 498 aa11.26□□□□□ -0.61
CPSF7-212ENST00000489728 PIEZO1Q92508 2521 aa11.26□□□□□ -0.61
CPSF7-212ENST00000489728 TNRC6BQ9UPQ9 1833 aaKnown RBP11.25□□□□□ -0.61
CPSF7-212ENST00000489728 MYO15AQ9UKN7 3530 aa11.25□□□□□ -0.61
CPSF7-212ENST00000489728 NUP205Q92621 2012 aa11.25□□□□□ -0.61
CPSF7-212ENST00000489728 LRRC72A6NJI9 287 aa11.25□□□□□ -0.61
CPSF7-212ENST00000489728 C10orf142B7Z368 130 aa11.25□□□□□ -0.61
CPSF7-212ENST00000489728 PALMO75781 387 aa11.25□□□□□ -0.61
CPSF7-212ENST00000489728 RNASEH2AO75792 299 aaKnown RBP11.25□□□□□ -0.61
CPSF7-212ENST00000489728 ZNF189O75820 626 aaPredicted RBP11.25□□□□□ -0.61
CPSF7-212ENST00000489728 SEMA4FO95754 770 aa11.25□□□□□ -0.61
CPSF7-212ENST00000489728 PEX11BO96011 259 aa11.25□□□□□ -0.61
CPSF7-212ENST00000489728 CTSLP07711 333 aa11.25□□□□□ -0.61
CPSF7-212ENST00000489728 CCNCP24863 283 aa11.25□□□□□ -0.61
CPSF7-212ENST00000489728 DRD3P35462 400 aa11.25□□□□□ -0.61
CPSF7-212ENST00000489728 NUDT1P36639 197 aa11.25□□□□□ -0.61
CPSF7-212ENST00000489728 CETN2P41208 172 aa11.25□□□□□ -0.61
CPSF7-212ENST00000489728 SUOXP51687 545 aa11.25□□□□□ -0.61
CPSF7-212ENST00000489728 RWDD2BP57060 319 aa11.25□□□□□ -0.61
CPSF7-212ENST00000489728 AP1S1P61966 158 aa11.25□□□□□ -0.61
CPSF7-212ENST00000489728 HNRNPDQ14103 355 aaKnown RBP11.25□□□□□ -0.61
CPSF7-212ENST00000489728 LBRQ14739 615 aaKnown RBP11.25□□□□□ -0.61
CPSF7-212ENST00000489728 MYLK3Q32MK0 819 aa11.25□□□□□ -0.61
CPSF7-212ENST00000489728 SYCP2LQ5T4T6 812 aa11.25□□□□□ -0.61
CPSF7-212ENST00000489728 LYSMD4Q5XG99 296 aa11.25□□□□□ -0.61
CPSF7-212ENST00000489728 SPOCD1Q6ZMY3 1216 aa11.25□□□□□ -0.61
CPSF7-212ENST00000489728 PEX26Q7Z412 305 aa11.25□□□□□ -0.61
CPSF7-212ENST00000489728 NT5DC3Q86UY8 548 aa11.25□□□□□ -0.61
CPSF7-212ENST00000489728 HDDC3Q8N4P3 179 aa11.25□□□□□ -0.61
CPSF7-212ENST00000489728 AADATQ8N5Z0 425 aa11.25□□□□□ -0.61
CPSF7-212ENST00000489728 UBL4BQ8N7F7 174 aa11.25□□□□□ -0.61
CPSF7-212ENST00000489728 PLD5Q8N7P1 536 aa11.25□□□□□ -0.61
CPSF7-212ENST00000489728 OR2T34Q8NGX1 318 aa11.25□□□□□ -0.61
CPSF7-212ENST00000489728 MAML1Q92585 1016 aa11.25□□□□□ -0.61
CPSF7-212ENST00000489728 RAB7BQ96AH8 199 aa11.25□□□□□ -0.61
CPSF7-212ENST00000489728 CINPQ9BW66 212 aaPredicted RBP11.25□□□□□ -0.61
CPSF7-212ENST00000489728 TM6SF2Q9BZW4 377 aa11.25□□□□□ -0.61
CPSF7-212ENST00000489728 DTLQ9NZJ0 730 aa11.25□□□□□ -0.61
CPSF7-212ENST00000489728 HECAQ9UBI9 543 aaPredicted RBP11.25□□□□□ -0.61
CPSF7-212ENST00000489728 AMFRQ9UKV5 643 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms