RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 Q6ZVU0 165 aa9.41□□□□□ -0.9
SSBP1-212ENST00000489378 SV2AQ7L0J3 742 aa9.41□□□□□ -0.9
SSBP1-212ENST00000489378 DCP2Q8IU60 420 aaKnown RBP9.41□□□□□ -0.9
SSBP1-212ENST00000489378 CCDC117Q8IWD4 279 aaPredicted RBP9.41□□□□□ -0.9
SSBP1-212ENST00000489378 UNC45BQ8IWX7 931 aa9.41□□□□□ -0.9
SSBP1-212ENST00000489378 C12orf56Q8IXR9 622 aa9.41□□□□□ -0.9
SSBP1-212ENST00000489378 SRRM1Q8IYB3 904 aaKnown RBP9.41□□□□□ -0.9
SSBP1-212ENST00000489378 SDR16C5Q8N3Y7 309 aa9.41□□□□□ -0.9
SSBP1-212ENST00000489378 GLMNQ92990 594 aa9.41□□□□□ -0.9
SSBP1-212ENST00000489378 CCDC74AQ96AQ1 378 aa9.41□□□□□ -0.9
SSBP1-212ENST00000489378 CYP3A43Q9HB55 503 aa9.41□□□□□ -0.9
SSBP1-212ENST00000489378 PNMA8BQ9ULN7 279 aaPredicted RBP9.41□□□□□ -0.9
SSBP1-212ENST00000489378 HS3ST3A1Q9Y663 406 aa9.41□□□□□ -0.9
SSBP1-212ENST00000489378 TYW5A2RUC4 315 aaKnown RBP9.4□□□□□ -0.9
SSBP1-212ENST00000489378 MCF2LO15068 1137 aa9.4□□□□□ -0.9
SSBP1-212ENST00000489378 BNIP3LO60238 219 aa9.4□□□□□ -0.9
SSBP1-212ENST00000489378 SEMA7AO75326 666 aa9.4□□□□□ -0.9
SSBP1-212ENST00000489378 PCDH8O95206 1070 aa9.4□□□□□ -0.9
SSBP1-212ENST00000489378 CTSLP07711 333 aa9.4□□□□□ -0.9
SSBP1-212ENST00000489378 PDGFRAP16234 1089 aa9.4□□□□□ -0.9
SSBP1-212ENST00000489378 ZNF18P17022 549 aa9.4□□□□□ -0.9
SSBP1-212ENST00000489378 OXCT1P55809 520 aa9.4□□□□□ -0.9
SSBP1-212ENST00000489378 TBX4P57082 545 aa9.4□□□□□ -0.9
SSBP1-212ENST00000489378 SNRPFP62306 86 aaKnown RBP9.4□□□□□ -0.9
SSBP1-212ENST00000489378 ACCSLQ4AC99 568 aa9.4□□□□□ -0.9
SSBP1-212ENST00000489378 PRRT3Q5FWE3 981 aa9.4□□□□□ -0.9
SSBP1-212ENST00000489378 FAM26FQ5R3K3 315 aa9.4□□□□□ -0.9
SSBP1-212ENST00000489378 C1orf220Q5T0J3 134 aa9.4□□□□□ -0.9
SSBP1-212ENST00000489378 CAPRIN2Q6IMN6 1127 aaKnown RBP9.4□□□□□ -0.9
SSBP1-212ENST00000489378 ANKRD52Q8NB46 1076 aa9.4□□□□□ -0.9
SSBP1-212ENST00000489378 AZIN2Q96A70 460 aa9.4□□□□□ -0.9
SSBP1-212ENST00000489378 ABHD17AQ96GS6 310 aa9.4□□□□□ -0.9
SSBP1-212ENST00000489378 FCRL2Q96LA5 508 aaPredicted RBP9.4□□□□□ -0.9
SSBP1-212ENST00000489378 TMEM74Q96NL1 305 aa9.4□□□□□ -0.9
SSBP1-212ENST00000489378 IPO9Q96P70 1041 aaKnown RBP9.4□□□□□ -0.9
SSBP1-212ENST00000489378 LRRC61Q9BV99 259 aa9.4□□□□□ -0.9
SSBP1-212ENST00000489378 CPEB1Q9BZB8 566 aaKnown RBP9.4□□□□□ -0.9
SSBP1-212ENST00000489378 ABCC13Q9NSE7 274 aa9.4□□□□□ -0.9
SSBP1-212ENST00000489378 SIRPGQ9P1W8 387 aa9.4□□□□□ -0.9
SSBP1-212ENST00000489378 TFIP11Q9UBB9 837 aaKnown RBP9.4□□□□□ -0.9
SSBP1-212ENST00000489378 SPASTQ9UBP0 616 aa9.4□□□□□ -0.9
SSBP1-212ENST00000489378 GULP1Q9UBP9 304 aa9.4□□□□□ -0.9
SSBP1-212ENST00000489378 IPO11Q9UI26 975 aaKnown RBP9.4□□□□□ -0.9
SSBP1-212ENST00000489378 XPO7Q9UIA9 1087 aaKnown RBP9.4□□□□□ -0.9
SSBP1-212ENST00000489378 CLIC4Q9Y696 253 aa9.4□□□□□ -0.9
SSBP1-212ENST00000489378 PRR19A6NJB7 356 aa9.39□□□□□ -0.91
SSBP1-212ENST00000489378 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.39□□□□□ -0.91
SSBP1-212ENST00000489378 LMO7DNF2Z398 122 aa9.39□□□□□ -0.91
SSBP1-212ENST00000489378 KPNA3O00505 521 aaPredicted RBP9.39□□□□□ -0.91
SSBP1-212ENST00000489378 ALOX15BO15296 676 aa9.39□□□□□ -0.91
SSBP1-212ENST00000489378 YY2O15391 372 aa9.39□□□□□ -0.91
SSBP1-212ENST00000489378 ATP9BO43861 1147 aa9.39□□□□□ -0.91
SSBP1-212ENST00000489378 PAK4O96013 591 aaPredicted RBP9.39□□□□□ -0.91
SSBP1-212ENST00000489378 ANXA6P08133 673 aa9.39□□□□□ -0.91
SSBP1-212ENST00000489378 CELA2BP08218 269 aaPredicted RBP9.39□□□□□ -0.91
SSBP1-212ENST00000489378 LIFP15018 202 aa9.39□□□□□ -0.91
SSBP1-212ENST00000489378 NOS2P35228 1153 aa9.39□□□□□ -0.91
SSBP1-212ENST00000489378 TXLNAP40222 546 aa9.39□□□□□ -0.91
SSBP1-212ENST00000489378 RABIFP47224 123 aa9.39□□□□□ -0.91
SSBP1-212ENST00000489378 DLG2Q15700 870 aa9.39□□□□□ -0.91
SSBP1-212ENST00000489378 GOLGA7BQ2TAP0 167 aa9.39□□□□□ -0.91
SSBP1-212ENST00000489378 ARHGAP17Q68EM7 881 aa9.39□□□□□ -0.91
SSBP1-212ENST00000489378 LGI2Q8N0V4 545 aa9.39□□□□□ -0.91
SSBP1-212ENST00000489378 PDILTQ8N807 584 aa9.39□□□□□ -0.91
SSBP1-212ENST00000489378 KYQ8NBH2 561 aa9.39□□□□□ -0.91
SSBP1-212ENST00000489378 SLC4A11Q8NBS3 891 aa9.39□□□□□ -0.91
SSBP1-212ENST00000489378 NKD1Q969G9 470 aa9.39□□□□□ -0.91
SSBP1-212ENST00000489378 DDX50Q9BQ39 737 aaKnown RBP9.39□□□□□ -0.91
SSBP1-212ENST00000489378 NIF3L1Q9GZT8 377 aa9.39□□□□□ -0.91
SSBP1-212ENST00000489378 CLPBQ9H078 707 aa9.39□□□□□ -0.91
SSBP1-212ENST00000489378 LRRN3Q9H3W5 708 aa9.39□□□□□ -0.91
SSBP1-212ENST00000489378 LRRC4Q9HBW1 653 aa9.39□□□□□ -0.91
SSBP1-212ENST00000489378 APOBEC3BQ9UH17 382 aaKnown RBP9.39□□□□□ -0.91
SSBP1-212ENST00000489378 DAAM1Q9Y4D1 1078 aa9.39□□□□□ -0.91
SSBP1-212ENST00000489378 XPO1O14980 1071 aaKnown RBP9.39□□□□□ -0.91
SSBP1-212ENST00000489378 MAN1A2O60476 641 aa9.39□□□□□ -0.91
SSBP1-212ENST00000489378 MOCS2O96007 188 aaPredicted RBP9.39□□□□□ -0.91
SSBP1-212ENST00000489378 PRKCGP05129 697 aa9.39□□□□□ -0.91
SSBP1-212ENST00000489378 BMP2P12643 396 aa9.39□□□□□ -0.91
SSBP1-212ENST00000489378 TSHRP16473 764 aa9.39□□□□□ -0.91
SSBP1-212ENST00000489378 CD82P27701 267 aa9.39□□□□□ -0.91
SSBP1-212ENST00000489378 ARSDP51689 593 aa9.39□□□□□ -0.91
SSBP1-212ENST00000489378 RAD23BP54727 409 aa9.39□□□□□ -0.91
SSBP1-212ENST00000489378 DAOAP59103 153 aa9.39□□□□□ -0.91
SSBP1-212ENST00000489378 ZFP36L1Q07352 338 aaKnown RBP9.39□□□□□ -0.91
SSBP1-212ENST00000489378 KLRB1Q12918 225 aa9.39□□□□□ -0.91
SSBP1-212ENST00000489378 LACTB2Q53H82 288 aaPredicted RBP9.39□□□□□ -0.91
SSBP1-212ENST00000489378 ESRP1Q6NXG1 681 aaKnown RBP9.39□□□□□ -0.91
SSBP1-212ENST00000489378 TMPRSS9Q7Z410 1059 aa9.39□□□□□ -0.91
SSBP1-212ENST00000489378 CIR1Q86X95 450 aaPredicted RBP9.39□□□□□ -0.91
SSBP1-212ENST00000489378 PHACTR4Q8IZ21 702 aa9.39□□□□□ -0.91
SSBP1-212ENST00000489378 TAS1R2Q8TE23 839 aa9.39□□□□□ -0.91
SSBP1-212ENST00000489378 ERCC4Q92889 916 aaPredicted RBP9.39□□□□□ -0.91
SSBP1-212ENST00000489378 PMEPA1Q969W9 287 aa9.39□□□□□ -0.91
SSBP1-212ENST00000489378 KLF6Q99612 283 aaPredicted RBP9.39□□□□□ -0.91
SSBP1-212ENST00000489378 SLC17A9Q9BYT1 436 aa9.39□□□□□ -0.91
SSBP1-212ENST00000489378 SRPRBQ9Y5M8 271 aaKnown RBP9.39□□□□□ -0.91
SSBP1-212ENST00000489378 MTORP42345 2549 aa9.38□□□□□ -0.91
SSBP1-212ENST00000489378 ADGRG4Q8IZF6 3080 aa9.38□□□□□ -0.91
SSBP1-212ENST00000489378 STMND1H3BQB6 276 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms