RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 OXR1Q8N573 874 aa12.8□□□□□ -0.36
SRRM1-216ENST00000489130 PNPLA1Q8N8W4 532 aa12.8□□□□□ -0.36
SRRM1-216ENST00000489130 TMEM145Q8NBT3 493 aa12.8□□□□□ -0.36
SRRM1-216ENST00000489130 VCPIP1Q96JH7 1222 aa12.8□□□□□ -0.36
SRRM1-216ENST00000489130 HEPHQ9BQS7 1158 aa12.8□□□□□ -0.36
SRRM1-216ENST00000489130 TAS2R14Q9NYV8 317 aa12.8□□□□□ -0.36
SRRM1-216ENST00000489130 AIPL1Q9NZN9 384 aa12.8□□□□□ -0.36
SRRM1-216ENST00000489130 FCF1Q9Y324 198 aaKnown RBP12.8□□□□□ -0.36
SRRM1-216ENST00000489130 ACTL7AQ9Y615 435 aa12.8□□□□□ -0.36
SRRM1-216ENST00000489130 USP24Q9UPU5 2620 aa12.8□□□□□ -0.36
SRRM1-216ENST00000489130 A0A1W2PQU0 124 aa12.79□□□□□ -0.36
SRRM1-216ENST00000489130 PRAMEF26H0Y7S4 382 aa12.79□□□□□ -0.36
SRRM1-216ENST00000489130 TNFSF14O43557 240 aa12.79□□□□□ -0.36
SRRM1-216ENST00000489130 MAGEC1O60732 1142 aa12.79□□□□□ -0.36
SRRM1-216ENST00000489130 RNGTTO60942 597 aaKnown RBP12.79□□□□□ -0.36
SRRM1-216ENST00000489130 ATXN1LP0C7T5 689 aaKnown RBP12.79□□□□□ -0.36
SRRM1-216ENST00000489130 ITGB7P26010 798 aa12.79□□□□□ -0.36
SRRM1-216ENST00000489130 EPHA8P29322 1005 aaPredicted RBP12.79□□□□□ -0.36
SRRM1-216ENST00000489130 RXRGP48443 463 aa12.79□□□□□ -0.36
SRRM1-216ENST00000489130 NEK3P51956 506 aa12.79□□□□□ -0.36
SRRM1-216ENST00000489130 OGDHQ02218 1023 aa12.79□□□□□ -0.36
SRRM1-216ENST00000489130 STAT4Q14765 748 aa12.79□□□□□ -0.36
SRRM1-216ENST00000489130 IQCB1Q15051 598 aa12.79□□□□□ -0.36
SRRM1-216ENST00000489130 POLD3Q15054 466 aaPredicted RBP12.79□□□□□ -0.36
SRRM1-216ENST00000489130 ZNF284Q2VY69 593 aa12.79□□□□□ -0.36
SRRM1-216ENST00000489130 PRAMEF14Q5SWL7 426 aa12.79□□□□□ -0.36
SRRM1-216ENST00000489130 DCUN1D2Q6PH85 259 aa12.79□□□□□ -0.36
SRRM1-216ENST00000489130 HORMAD1Q86X24 394 aa12.79□□□□□ -0.36
SRRM1-216ENST00000489130 SPATS2Q86XZ4 545 aaKnown RBP12.79□□□□□ -0.36
SRRM1-216ENST00000489130 PYROXD2Q8N2H3 581 aa12.79□□□□□ -0.36
SRRM1-216ENST00000489130 RTL3Q8N8U3 475 aaKnown RBP12.79□□□□□ -0.36
SRRM1-216ENST00000489130 SAP25Q8TEE9 199 aa12.79□□□□□ -0.36
SRRM1-216ENST00000489130 EPAS1Q99814 870 aa12.79□□□□□ -0.36
SRRM1-216ENST00000489130 TTYH3Q9C0H2 523 aa12.79□□□□□ -0.36
SRRM1-216ENST00000489130 NOL6Q9H6R4 1146 aaKnown RBP12.79□□□□□ -0.36
SRRM1-216ENST00000489130 FZD10Q9ULW2 581 aa12.79□□□□□ -0.36
SRRM1-216ENST00000489130 HPCAL4Q9UM19 191 aa12.79□□□□□ -0.36
SRRM1-216ENST00000489130 CHD5Q8TDI0 1954 aa12.78□□□□□ -0.36
SRRM1-216ENST00000489130 ZSCAN5CA6NGD5 496 aaPredicted RBP12.78□□□□□ -0.36
SRRM1-216ENST00000489130 WASH4PA8MWX3 477 aa12.78□□□□□ -0.36
SRRM1-216ENST00000489130 KDELR3O43731 214 aa12.78□□□□□ -0.36
SRRM1-216ENST00000489130 GSRP00390 522 aa12.78□□□□□ -0.36
SRRM1-216ENST00000489130 ITGAVP06756 1048 aa12.78□□□□□ -0.36
SRRM1-216ENST00000489130 ADRB3P13945 408 aa12.78□□□□□ -0.36
SRRM1-216ENST00000489130 TNFAIP3P21580 790 aa12.78□□□□□ -0.36
SRRM1-216ENST00000489130 EPHB2P29323 1055 aa12.78□□□□□ -0.36
SRRM1-216ENST00000489130 PRKCIP41743 596 aa12.78□□□□□ -0.36
SRRM1-216ENST00000489130 ARRB1P49407 418 aaPredicted RBP12.78□□□□□ -0.36
SRRM1-216ENST00000489130 MAMLD1Q13495 774 aa12.78□□□□□ -0.36
SRRM1-216ENST00000489130 ASIC2Q16515 512 aa12.78□□□□□ -0.36
SRRM1-216ENST00000489130 TMEM259Q4ZIN3 620 aa12.78□□□□□ -0.36
SRRM1-216ENST00000489130 E4F1Q66K89 784 aaPredicted RBP12.78□□□□□ -0.36
SRRM1-216ENST00000489130 PLEKHA7Q6IQ23 1121 aa12.78□□□□□ -0.36
SRRM1-216ENST00000489130 SCYL2Q6P3W7 929 aa12.78□□□□□ -0.36
SRRM1-216ENST00000489130 CCNI2Q6ZMN8 369 aaPredicted RBP12.78□□□□□ -0.36
SRRM1-216ENST00000489130 TMC6Q7Z403 805 aa12.78□□□□□ -0.36
SRRM1-216ENST00000489130 GATAD2AQ86YP4 633 aa12.78□□□□□ -0.36
SRRM1-216ENST00000489130 OR2AP1Q8NGE2 309 aa12.78□□□□□ -0.36
SRRM1-216ENST00000489130 VOPP1Q96AW1 172 aa12.78□□□□□ -0.36
SRRM1-216ENST00000489130 LRIG1Q96JA1 1093 aa12.78□□□□□ -0.36
SRRM1-216ENST00000489130 NAP1L5Q96NT1 182 aaPredicted RBP12.78□□□□□ -0.36
SRRM1-216ENST00000489130 EDEM3Q9BZQ6 932 aa12.78□□□□□ -0.36
SRRM1-216ENST00000489130 TM6SF2Q9BZW4 377 aa12.78□□□□□ -0.36
SRRM1-216ENST00000489130 HAUS4Q9H6D7 363 aa12.78□□□□□ -0.36
SRRM1-216ENST00000489130 PARVAQ9NVD7 372 aa12.78□□□□□ -0.36
SRRM1-216ENST00000489130 HECAQ9UBI9 543 aaPredicted RBP12.78□□□□□ -0.36
SRRM1-216ENST00000489130 FTSJ1Q9UET6 329 aa12.78□□□□□ -0.36
SRRM1-216ENST00000489130 ZMIZ1Q9ULJ6 1067 aa12.78□□□□□ -0.36
SRRM1-216ENST00000489130 ZFR2Q9UPR6 939 aaKnown RBP12.78□□□□□ -0.36
SRRM1-216ENST00000489130 COL5A1P20908 1838 aaPredicted RBP12.78□□□□□ -0.36
SRRM1-216ENST00000489130 CACNA1BQ00975 2339 aa12.78□□□□□ -0.36
SRRM1-216ENST00000489130 TP53BP1Q12888 1972 aaPredicted RBP12.78□□□□□ -0.36
SRRM1-216ENST00000489130 TMCO5BA8MYB1 307 aa12.77□□□□□ -0.37
SRRM1-216ENST00000489130 SLC31A1O15431 190 aa12.77□□□□□ -0.37
SRRM1-216ENST00000489130 AP1G1O43747 822 aa12.77□□□□□ -0.37
SRRM1-216ENST00000489130 PCDH8O95206 1070 aa12.77□□□□□ -0.37
SRRM1-216ENST00000489130 GZMAP12544 262 aa12.77□□□□□ -0.37
SRRM1-216ENST00000489130 PRLRP16471 622 aa12.77□□□□□ -0.37
SRRM1-216ENST00000489130 DESP17661 470 aa12.77□□□□□ -0.37
SRRM1-216ENST00000489130 HNRNPA2B1P22626 353 aaKnown RBP12.77□□□□□ -0.37
SRRM1-216ENST00000489130 AKT2P31751 481 aa12.77□□□□□ -0.37
SRRM1-216ENST00000489130 HTR7P34969 479 aa12.77□□□□□ -0.37
SRRM1-216ENST00000489130 DNA2P51530 1060 aa12.77□□□□□ -0.37
SRRM1-216ENST00000489130 YBEYP58557 167 aaPredicted RBP12.77□□□□□ -0.37
SRRM1-216ENST00000489130 NR1I3Q14994 352 aa12.77□□□□□ -0.37
SRRM1-216ENST00000489130 KLHL40Q2TBA0 621 aa12.77□□□□□ -0.37
SRRM1-216ENST00000489130 PARP15Q460N3 678 aa12.77□□□□□ -0.37
SRRM1-216ENST00000489130 FIGNQ5HY92 759 aa12.77□□□□□ -0.37
SRRM1-216ENST00000489130 SFMBT2Q5VUG0 894 aa12.77□□□□□ -0.37
SRRM1-216ENST00000489130 SEL1L3Q68CR1 1132 aa12.77□□□□□ -0.37
SRRM1-216ENST00000489130 PARS2Q7L3T8 475 aaKnown RBP12.77□□□□□ -0.37
SRRM1-216ENST00000489130 TMPRSS7Q7RTY8 843 aa12.77□□□□□ -0.37
SRRM1-216ENST00000489130 KANSL1Q7Z3B3 1105 aa12.77□□□□□ -0.37
SRRM1-216ENST00000489130 ZNF571Q7Z3V5 609 aaPredicted RBP12.77□□□□□ -0.37
SRRM1-216ENST00000489130 ZSCAN30Q86W11 494 aa12.77□□□□□ -0.37
SRRM1-216ENST00000489130 CASKIN2Q8WXE0 1202 aa12.77□□□□□ -0.37
SRRM1-216ENST00000489130 ZCCHC14Q8WYQ9 949 aaKnown RBP12.77□□□□□ -0.37
SRRM1-216ENST00000489130 ZDHHC6Q9H6R6 413 aa12.77□□□□□ -0.37
SRRM1-216ENST00000489130 CATSPERBQ9H7T0 1116 aa12.77□□□□□ -0.37
SRRM1-216ENST00000489130 CA5BQ9Y2D0 317 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms