RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 ADCY7P51828 1080 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 MRPL12P52815 198 aaKnown RBP3.55□□□□□ -1.84
PRPF4-203ENST00000488937 ARFIP1P53367 373 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 YPEL5P62699 121 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 RBM6P78332 1123 aaKnown RBP3.55□□□□□ -1.84
PRPF4-203ENST00000488937 TIAL1Q01085 375 aaKnown RBP eCLIP3.55□□□□□ -1.84
PRPF4-203ENST00000488937 DUSP2Q05923 314 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 SCN1BQ07699 218 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 NIPAL4Q0D2K0 466 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 TUBB3Q13509 450 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 NAA25Q14CX7 972 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 IQCB1Q15051 598 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 SF3B3Q15393 1217 aaKnown RBP3.55□□□□□ -1.84
PRPF4-203ENST00000488937 AAK1Q2M2I8 961 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 SHROOM1Q2M3G4 852 aaPredicted RBP3.55□□□□□ -1.84
PRPF4-203ENST00000488937 ALG11Q2TAA5 492 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 NHSL2Q5HYW2 709 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 TOR1AIP1Q5JTV8 583 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 UBAP2Q5T6F2 1119 aaKnown RBP3.55□□□□□ -1.84
PRPF4-203ENST00000488937 STRIP1Q5VSL9 837 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 CRELD2Q6UXH1 353 aaPredicted RBP3.55□□□□□ -1.84
PRPF4-203ENST00000488937 SYNE3Q6ZMZ3 975 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 MSANTD1Q6ZTZ1 278 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 ERN2Q76MJ5 926 aaKnown RBP3.55□□□□□ -1.84
PRPF4-203ENST00000488937 TMEM110Q86TL2 294 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 CNTN4Q8IWV2 1026 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 RNF168Q8IYW5 571 aaPredicted RBP3.55□□□□□ -1.84
PRPF4-203ENST00000488937 D2HGDHQ8N465 521 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 MINDY1Q8N5J2 469 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 PLD5Q8N7P1 536 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 RTL3Q8N8U3 475 aaKnown RBP3.55□□□□□ -1.84
PRPF4-203ENST00000488937 BPIFB1Q8TDL5 484 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 KLHL29Q96CT2 875 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 SLC7A6OSQ96CW6 309 aaPredicted RBP3.55□□□□□ -1.84
PRPF4-203ENST00000488937 RNFT2Q96EX2 444 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 ERO1AQ96HE7 468 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 CCDC114Q96M63 670 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 UROC1Q96N76 676 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 SLC46A1Q96NT5 459 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 MPHOSPH9Q99550 1183 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 SERHL2Q9H4I8 314 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 SH2D4AQ9H788 454 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 POLR1BQ9H9Y6 1135 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 PFDN4Q9NQP4 134 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 SLC22A11Q9NSA0 550 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 CHCHD3Q9NX63 227 aaKnown RBP3.55□□□□□ -1.84
PRPF4-203ENST00000488937 KCTD5Q9NXV2 234 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 ALKBH4Q9NXW9 302 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 NINJ2Q9NZG7 142 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 IL19Q9UHD0 177 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 LAMP5Q9UJQ1 280 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 PACSIN3Q9UKS6 424 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 SUFUQ9UMX1 484 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 USP22Q9UPT9 525 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 SHOC2Q9UQ13 582 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 PIN4Q9Y237 131 aaKnown RBP3.55□□□□□ -1.84
PRPF4-203ENST00000488937 PTRH2Q9Y3E5 179 aaKnown RBP3.55□□□□□ -1.84
PRPF4-203ENST00000488937 SNX14Q9Y5W7 946 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 CAPN7Q9Y6W3 813 aa3.55□□□□□ -1.84
PRPF4-203ENST00000488937 ZMYM3Q14202 1370 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 FAM90A8PA6NJQ4 464 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 OR6C76A6NM76 312 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 ZAR1LA6NP61 321 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 M0QYT0 321 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 ZNF263O14978 683 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 TLR2O60603 784 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 PALMO75781 387 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 BCAS2O75934 225 aaPredicted RBP3.54□□□□□ -1.84
PRPF4-203ENST00000488937 RASAL1O95294 804 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 RB1P06400 928 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 ATXN1LP0C7T5 689 aaKnown RBP3.54□□□□□ -1.84
PRPF4-203ENST00000488937 FAM90A13PP0C7W8 464 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 FAM90A24PP0C7X0 464 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 ZNF8P17098 575 aaPredicted RBP3.54□□□□□ -1.84
PRPF4-203ENST00000488937 TRIM21P19474 475 aaKnown RBP3.54□□□□□ -1.84
PRPF4-203ENST00000488937 TYMPP19971 482 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 PTPN3P26045 913 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 RBL1P28749 1068 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 AVPR2P30518 371 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 CCR10P46092 362 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 NT5C2P49902 561 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 STAT2P52630 851 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 MVDP53602 400 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 PMS2P54278 862 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 EFNB1P98172 346 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 AKAP17AQ02040 695 aaKnown RBP3.54□□□□□ -1.84
PRPF4-203ENST00000488937 CEBPZQ03701 1054 aaKnown RBP3.54□□□□□ -1.84
PRPF4-203ENST00000488937 PTK6Q13882 451 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 C15orf59Q2T9L4 293 aaPredicted RBP3.54□□□□□ -1.84
PRPF4-203ENST00000488937 ASTE1Q2TB18 679 aaPredicted RBP3.54□□□□□ -1.84
PRPF4-203ENST00000488937 PTCHD3Q3KNS1 767 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 GAGE13Q4V321 117 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 UTP14CQ5TAP6 766 aaKnown RBP3.54□□□□□ -1.84
PRPF4-203ENST00000488937 GKAP1Q5VSY0 366 aaPredicted RBP3.54□□□□□ -1.84
PRPF4-203ENST00000488937 FAM90A2PQ658T7 463 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 Q8NA96 180 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 PLA2G15Q8NCC3 412 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 CNNM3Q8NE01 707 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 DENND6BQ8NEG7 585 aa3.54□□□□□ -1.84
PRPF4-203ENST00000488937 ANKRD20A12PQ8NF67 263 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms