RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 GRAPLQ8TC17 118 aaPredicted RBP2.83□□□□□ -1.96
CCDC93-209ENST00000488908 TAS1R2Q8TE23 839 aa2.83□□□□□ -1.96
CCDC93-209ENST00000488908 DDX23Q9BUQ8 820 aaKnown RBP2.83□□□□□ -1.96
CCDC93-209ENST00000488908 MOV10L1Q9BXT6 1211 aaKnown RBP2.83□□□□□ -1.96
CCDC93-209ENST00000488908 XRN2Q9H0D6 950 aaKnown RBP eCLIP2.83□□□□□ -1.96
CCDC93-209ENST00000488908 NECTIN3Q9NQS3 549 aa2.83□□□□□ -1.96
CCDC93-209ENST00000488908 GOLGA6AQ9NYA3 693 aa2.83□□□□□ -1.96
CCDC93-209ENST00000488908 LRFN1Q9P244 771 aa2.83□□□□□ -1.96
CCDC93-209ENST00000488908 OSGIN2Q9Y236 505 aa2.83□□□□□ -1.96
CCDC93-209ENST00000488908 PAM16Q9Y3D7 125 aa2.83□□□□□ -1.96
CCDC93-209ENST00000488908 DDTLA6NHG4 134 aaPredicted RBP2.82□□□□□ -1.96
CCDC93-209ENST00000488908 KIF28PB7ZC32 967 aa2.82□□□□□ -1.96
CCDC93-209ENST00000488908 SYT5O00445 386 aa2.82□□□□□ -1.96
CCDC93-209ENST00000488908 TIMM23O14925 209 aa2.82□□□□□ -1.96
CCDC93-209ENST00000488908 ZNF500O60304 480 aaPredicted RBP2.82□□□□□ -1.96
CCDC93-209ENST00000488908 PQBP1O60828 265 aaKnown RBP2.82□□□□□ -1.96
CCDC93-209ENST00000488908 GAGE7O76087 117 aa2.82□□□□□ -1.96
CCDC93-209ENST00000488908 LARGE1O95461 756 aa2.82□□□□□ -1.96
CCDC93-209ENST00000488908 DDAH2O95865 285 aa2.82□□□□□ -1.96
CCDC93-209ENST00000488908 GAGE12FP0CL80 117 aa2.82□□□□□ -1.96
CCDC93-209ENST00000488908 GAGE12GP0CL81 117 aa2.82□□□□□ -1.96
CCDC93-209ENST00000488908 GAGE12IP0CL82 117 aa2.82□□□□□ -1.96
CCDC93-209ENST00000488908 FGF5P12034 268 aa2.82□□□□□ -1.96
CCDC93-209ENST00000488908 PRPH2P23942 346 aa2.82□□□□□ -1.96
CCDC93-209ENST00000488908 TIMP3P35625 211 aa2.82□□□□□ -1.96
CCDC93-209ENST00000488908 NR0B1P51843 470 aaKnown RBP2.82□□□□□ -1.96
CCDC93-209ENST00000488908 CASP5P51878 434 aa2.82□□□□□ -1.96
CCDC93-209ENST00000488908 ALDH18A1P54886 795 aaKnown RBP2.82□□□□□ -1.96
CCDC93-209ENST00000488908 ECT2LQ008S8 904 aa2.82□□□□□ -1.96
CCDC93-209ENST00000488908 CYP4A11Q02928 519 aa2.82□□□□□ -1.96
CCDC93-209ENST00000488908 GAGE1Q13065 139 aa2.82□□□□□ -1.96
CCDC93-209ENST00000488908 GAGE4Q13068 117 aa2.82□□□□□ -1.96
CCDC93-209ENST00000488908 NFE2Q16621 373 aaPredicted RBP2.82□□□□□ -1.96
CCDC93-209ENST00000488908 SYT16Q17RD7 645 aa2.82□□□□□ -1.96
CCDC93-209ENST00000488908 TMEM30BQ3MIR4 351 aa2.82□□□□□ -1.96
CCDC93-209ENST00000488908 TMEM268Q5VZI3 342 aa2.82□□□□□ -1.96
CCDC93-209ENST00000488908 BSPRYQ5W0U4 402 aa2.82□□□□□ -1.96
CCDC93-209ENST00000488908 KLHL24Q6TFL4 600 aa2.82□□□□□ -1.96
CCDC93-209ENST00000488908 TMC8Q8IU68 726 aa2.82□□□□□ -1.96
CCDC93-209ENST00000488908 NRSN1Q8IZ57 195 aa2.82□□□□□ -1.96
CCDC93-209ENST00000488908 KBTBD3Q8NAB2 608 aa2.82□□□□□ -1.96
CCDC93-209ENST00000488908 GPT2Q8TD30 523 aa2.82□□□□□ -1.96
CCDC93-209ENST00000488908 NPAS1Q99742 590 aa2.82□□□□□ -1.96
CCDC93-209ENST00000488908 PYGO2Q9BRQ0 406 aa2.82□□□□□ -1.96
CCDC93-209ENST00000488908 HDHD5Q9BXW7 423 aa2.82□□□□□ -1.96
CCDC93-209ENST00000488908 NPFFR1Q9GZQ6 430 aa2.82□□□□□ -1.96
CCDC93-209ENST00000488908 TMEM51Q9NW97 253 aa2.82□□□□□ -1.96
CCDC93-209ENST00000488908 SMARCAL1Q9NZC9 954 aa2.82□□□□□ -1.96
CCDC93-209ENST00000488908 PHTF1Q9UMS5 762 aa2.82□□□□□ -1.96
CCDC93-209ENST00000488908 THRAP3Q9Y2W1 955 aaKnown RBP2.82□□□□□ -1.96
CCDC93-209ENST00000488908 A0A0A0MQY5 61 aa2.81□□□□□ -1.96
CCDC93-209ENST00000488908 IGKV6D-41A0A0C4DH26 115 aa2.81□□□□□ -1.96
CCDC93-209ENST00000488908 SLC38A8A6NNN8 435 aa2.81□□□□□ -1.96
CCDC93-209ENST00000488908 SLC5A1P13866 664 aa2.81□□□□□ -1.96
CCDC93-209ENST00000488908 ZNF10P21506 573 aaPredicted RBP2.81□□□□□ -1.96
CCDC93-209ENST00000488908 SSTR2P30874 369 aa2.81□□□□□ -1.96
CCDC93-209ENST00000488908 AKT1P31749 480 aa2.81□□□□□ -1.96
CCDC93-209ENST00000488908 LIFRP42702 1097 aa2.81□□□□□ -1.96
CCDC93-209ENST00000488908 CLCN3P51790 818 aa2.81□□□□□ -1.96
CCDC93-209ENST00000488908 RCAN1P53805 252 aa2.81□□□□□ -1.96
CCDC93-209ENST00000488908 SF3A3Q12874 501 aaKnown RBP eCLIP2.81□□□□□ -1.965e-6■□□□□ 8
CCDC93-209ENST00000488908 ZBTB17Q13105 803 aa2.81□□□□□ -1.96
CCDC93-209ENST00000488908 GALEQ14376 348 aa2.81□□□□□ -1.96
CCDC93-209ENST00000488908 GFOD2Q3B7J2 385 aa2.81□□□□□ -1.96
CCDC93-209ENST00000488908 CYB5RLQ6IPT4 315 aa2.81□□□□□ -1.96
CCDC93-209ENST00000488908 SFR1Q86XK3 245 aa2.81□□□□□ -1.96
CCDC93-209ENST00000488908 RAVER1Q8IY67 606 aaKnown RBP2.81□□□□□ -1.96
CCDC93-209ENST00000488908 ZNF441Q8N8Z8 693 aa2.81□□□□□ -1.96
CCDC93-209ENST00000488908 OR1N1Q8NGS0 311 aa2.81□□□□□ -1.96
CCDC93-209ENST00000488908 ZNF501Q96CX3 271 aaPredicted RBP2.81□□□□□ -1.96
CCDC93-209ENST00000488908 DCTN5Q9BTE1 182 aa2.81□□□□□ -1.96
CCDC93-209ENST00000488908 MECRQ9BV79 373 aa2.81□□□□□ -1.96
CCDC93-209ENST00000488908 TRIM31Q9BZY9 425 aa2.81□□□□□ -1.96
CCDC93-209ENST00000488908 HERC5Q9UII4 1024 aaKnown RBP2.81□□□□□ -1.96
CCDC93-209ENST00000488908 C16orf97H3BN30 126 aa2.8□□□□□ -1.96
CCDC93-209ENST00000488908 CHL1O00533 1208 aa2.8□□□□□ -1.96
CCDC93-209ENST00000488908 VNN2O95498 520 aa2.8□□□□□ -1.96
CCDC93-209ENST00000488908 KLRK1P26718 216 aa2.8□□□□□ -1.96
CCDC93-209ENST00000488908 MARK3P27448 753 aa2.8□□□□□ -1.96
CCDC93-209ENST00000488908 DPP6P42658 865 aa2.8□□□□□ -1.96
CCDC93-209ENST00000488908 GPR12P47775 334 aa2.8□□□□□ -1.96
CCDC93-209ENST00000488908 PCP4P48539 62 aa2.8□□□□□ -1.96
CCDC93-209ENST00000488908 ALKBH1Q13686 389 aaKnown RBP2.8□□□□□ -1.96
CCDC93-209ENST00000488908 KRTAP13-3Q3SY46 172 aa2.8□□□□□ -1.96
CCDC93-209ENST00000488908 DCAF6Q58WW2 860 aa2.8□□□□□ -1.96
CCDC93-209ENST00000488908 NAPEPLDQ6IQ20 393 aa2.8□□□□□ -1.96
CCDC93-209ENST00000488908 MTFR2Q6P444 385 aa2.8□□□□□ -1.96
CCDC93-209ENST00000488908 RNF144BQ7Z419 303 aa2.8□□□□□ -1.96
CCDC93-209ENST00000488908 TRIM74Q86UV6 250 aa2.8□□□□□ -1.96
CCDC93-209ENST00000488908 TRIM73Q86UV7 250 aa2.8□□□□□ -1.96
CCDC93-209ENST00000488908 SPAG16Q8N0X2 631 aa2.8□□□□□ -1.96
CCDC93-209ENST00000488908 VPS52Q8N1B4 723 aa2.8□□□□□ -1.96
CCDC93-209ENST00000488908 AADATQ8N5Z0 425 aa2.8□□□□□ -1.96
CCDC93-209ENST00000488908 OR13A1Q8NGR1 328 aa2.8□□□□□ -1.96
CCDC93-209ENST00000488908 FAM76AQ8TAV0 307 aa2.8□□□□□ -1.96
CCDC93-209ENST00000488908 STT3BQ8TCJ2 826 aa2.8□□□□□ -1.96
CCDC93-209ENST00000488908 TBC1D22AQ8WUA7 517 aa2.8□□□□□ -1.96
CCDC93-209ENST00000488908 TEFMQ96QE5 360 aaKnown RBP2.8□□□□□ -1.96
CCDC93-209ENST00000488908 MMTAG2Q9BU76 263 aaKnown RBP2.8□□□□□ -1.96
CCDC93-209ENST00000488908 MSTO1Q9BUK6 570 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms