RNA–Protein interactions for RNA: ENST00000488553.3

RN7SL561P-201, Transcript of RNA, 7SL, cytoplasmic 561, pseudogene, humanhuman

BASIC

Gene RN7SL561P, Length 281 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL561P-201ENST00000488553 HADHAP40939 763 aa6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 CD86P42081 329 aa6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 SCTRP47872 440 aa6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 POLD2P49005 469 aa6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 LIG3P49916 1009 aa6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 EPHB3P54753 998 aa6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 CDH4P55283 916 aa6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 GNA12Q03113 381 aa6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 ITKQ08881 620 aa6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 BNIP1Q12981 228 aa6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 LBRQ14739 615 aaKnown RBP6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 POU6F1Q14863 301 aa6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 TAF12Q16514 161 aa6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 SPRED3Q2MJR0 410 aa6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 ADGRF1Q5T601 910 aa6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 CES4AQ5XG92 561 aa6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 FSTL4Q6MZW2 842 aa6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 ESRP1Q6NXG1 681 aaKnown RBP6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 RFWD3Q6PCD5 774 aa6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 C16orf59Q7L2K0 433 aa6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 KDELC2Q7Z4H8 507 aa6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 DENND1CQ8IV53 801 aa6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 CNTN4Q8IWV2 1026 aa6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 DCLK2Q8N568 766 aa6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 FITM2Q8N6M3 262 aa6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 GBP7Q8N8V2 638 aaPredicted RBP6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 ARMC2Q8NEN0 867 aa6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 PPHLN1Q8NEY8 458 aaKnown RBP6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 NSMCE1Q8WV22 266 aa6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 C10orf82Q8WW14 230 aa6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 AUTS2Q8WXX7 1259 aa6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 PPM1EQ8WY54 764 aa6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 E2F7Q96AV8 911 aa6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 PABPC5Q96DU9 382 aaKnown RBP6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 RMDN2Q96LZ7 410 aa6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 KCNK13Q9HB14 408 aa6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 SP110Q9HB58 689 aa6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 PDFQ9HBH1 243 aa6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 MRPL17Q9NRX2 175 aaKnown RBP6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 IARS2Q9NSE4 1012 aaKnown RBP6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 TREX1Q9NSU2 369 aa6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 ABCF3Q9NUQ8 709 aa6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 PCMTD2Q9NV79 361 aa6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 IL1RAPL1Q9NZN1 696 aa6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 TXNDC16Q9P2K2 825 aa6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 STK39Q9UEW8 545 aa6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 AGO1Q9UL18 857 aaKnown RBP6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 SLC12A4Q9UP95 1085 aa6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 TBC1D30Q9Y2I9 924 aa6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 TCAF1Q9Y4C2 921 aa6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 USH1CQ9Y6N9 552 aa6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 ZFP37Q9Y6Q3 630 aaPredicted RBP6.83□□□□□ -1.32
RN7SL561P-201ENST00000488553 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.82□□□□□ -1.32
RN7SL561P-201ENST00000488553 A0A0D9SEW6 157 aa6.82□□□□□ -1.32
RN7SL561P-201ENST00000488553 ILVBLA1L0T0 632 aa6.82□□□□□ -1.32
RN7SL561P-201ENST00000488553 TTC24A2A3L6 582 aaPredicted RBP6.82□□□□□ -1.32
RN7SL561P-201ENST00000488553 HEATR9A2RTY3 570 aa6.82□□□□□ -1.32
RN7SL561P-201ENST00000488553 C2orf78A6NCI8 922 aa6.82□□□□□ -1.32
RN7SL561P-201ENST00000488553 MROH6A6NGR9 719 aa6.82□□□□□ -1.32
RN7SL561P-201ENST00000488553 GOLGA8TH3BQL2 631 aa6.82□□□□□ -1.32
RN7SL561P-201ENST00000488553 GFRA2O00451 464 aa6.82□□□□□ -1.32
RN7SL561P-201ENST00000488553 PRRG1O14668 218 aa6.82□□□□□ -1.32
RN7SL561P-201ENST00000488553 MUSKO15146 869 aa6.82□□□□□ -1.32
RN7SL561P-201ENST00000488553 TEX28O15482 410 aa6.82□□□□□ -1.32
RN7SL561P-201ENST00000488553 GREM1O60565 184 aa6.82□□□□□ -1.32
RN7SL561P-201ENST00000488553 SNNO75324 88 aaPredicted RBP6.82□□□□□ -1.32
RN7SL561P-201ENST00000488553 DNAJC8O75937 253 aaPredicted RBP6.82□□□□□ -1.32
RN7SL561P-201ENST00000488553 UBOX5O94941 541 aa6.82□□□□□ -1.32
RN7SL561P-201ENST00000488553 VAPBO95292 243 aa6.82□□□□□ -1.32
RN7SL561P-201ENST00000488553 PAPSS2O95340 614 aaPredicted RBP6.82□□□□□ -1.32
RN7SL561P-201ENST00000488553 LATS1O95835 1130 aa6.82□□□□□ -1.32
RN7SL561P-201ENST00000488553 PROCP04070 461 aa6.82□□□□□ -1.32
RN7SL561P-201ENST00000488553 URODP06132 367 aa6.82□□□□□ -1.32
RN7SL561P-201ENST00000488553 ATXN1LP0C7T5 689 aaKnown RBP6.82□□□□□ -1.32
RN7SL561P-201ENST00000488553 TROVE2P10155 538 aaKnown RBP eCLIP6.82□□□□□ -1.32
RN7SL561P-201ENST00000488553 ACRP10323 421 aa6.82□□□□□ -1.32
RN7SL561P-201ENST00000488553 DNAJB1P25685 340 aa6.82□□□□□ -1.32
RN7SL561P-201ENST00000488553 HOXD9P28356 352 aaPredicted RBP6.82□□□□□ -1.32
RN7SL561P-201ENST00000488553 ALDH3A1P30838 453 aa6.82□□□□□ -1.32
RN7SL561P-201ENST00000488553 CORO1AP31146 461 aaKnown RBP6.82□□□□□ -1.32
RN7SL561P-201ENST00000488553 PPM1AP35813 382 aa6.82□□□□□ -1.32
RN7SL561P-201ENST00000488553 CHRNA4P43681 627 aa6.82□□□□□ -1.32
RN7SL561P-201ENST00000488553 SERPINB8P50452 374 aa6.82□□□□□ -1.32
RN7SL561P-201ENST00000488553 SERPINH1P50454 418 aaKnown RBP6.82□□□□□ -1.32
RN7SL561P-201ENST00000488553 MAXP61244 160 aa6.82□□□□□ -1.32
RN7SL561P-201ENST00000488553 RPS24P62847 133 aaKnown RBP6.82□□□□□ -1.32
RN7SL561P-201ENST00000488553 HTRA4P83105 476 aaPredicted RBP6.82□□□□□ -1.32
RN7SL561P-201ENST00000488553 DSC2Q02487 901 aa6.82□□□□□ -1.32
RN7SL561P-201ENST00000488553 CREMQ03060 361 aa6.82□□□□□ -1.32
RN7SL561P-201ENST00000488553 CDK18Q07002 472 aa6.82□□□□□ -1.32
RN7SL561P-201ENST00000488553 BST1Q10588 318 aa6.82□□□□□ -1.32
RN7SL561P-201ENST00000488553 TWF1Q12792 350 aa6.82□□□□□ -1.32
RN7SL561P-201ENST00000488553 STX3Q13277 289 aa6.82□□□□□ -1.32
RN7SL561P-201ENST00000488553 ZNF177Q13360 481 aaPredicted RBP6.82□□□□□ -1.32
RN7SL561P-201ENST00000488553 VEPH1Q14D04 833 aa6.82□□□□□ -1.32
RN7SL561P-201ENST00000488553 CYTH1Q15438 398 aa6.82□□□□□ -1.32
RN7SL561P-201ENST00000488553 CHI3L2Q15782 390 aa6.82□□□□□ -1.32
RN7SL561P-201ENST00000488553 SLC14A2Q15849 920 aa6.82□□□□□ -1.32
RN7SL561P-201ENST00000488553 CNGA3Q16281 694 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms