RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 CXorf51AA0A1B0GTR3 108 aa18.07■□□□□ 0.48
ITGB1-215ENST00000488494 KCNK3O14649 394 aa18.07■□□□□ 0.48
ITGB1-215ENST00000488494 FGF10O15520 208 aaPredicted RBP18.07■□□□□ 0.48
ITGB1-215ENST00000488494 CD38P28907 300 aa18.07■□□□□ 0.48
ITGB1-215ENST00000488494 IL9RQ01113 521 aa18.07■□□□□ 0.48
ITGB1-215ENST00000488494 CA9Q16790 459 aa18.07■□□□□ 0.48
ITGB1-215ENST00000488494 ERN2Q76MJ5 926 aaKnown RBP18.07■□□□□ 0.48
ITGB1-215ENST00000488494 VPS36Q86VN1 386 aa18.07■□□□□ 0.48
ITGB1-215ENST00000488494 RYBPQ8N488 228 aaPredicted RBP18.07■□□□□ 0.48
ITGB1-215ENST00000488494 ARFGAP1Q8N6T3 406 aa18.07■□□□□ 0.48
ITGB1-215ENST00000488494 FNIP1Q8TF40 1166 aa18.07■□□□□ 0.48
ITGB1-215ENST00000488494 SETD7Q8WTS6 366 aaKnown RBP18.07■□□□□ 0.48
ITGB1-215ENST00000488494 ISG20Q96AZ6 181 aaKnown RBP18.07■□□□□ 0.48
ITGB1-215ENST00000488494 SKA1Q96BD8 255 aa18.07■□□□□ 0.48
ITGB1-215ENST00000488494 IQCDQ96DY2 449 aa18.07■□□□□ 0.48
ITGB1-215ENST00000488494 HEPHQ9BQS7 1158 aa18.07■□□□□ 0.48
ITGB1-215ENST00000488494 SNRNP25Q9BV90 132 aaKnown RBP18.07■□□□□ 0.48
ITGB1-215ENST00000488494 HDAC8Q9BY41 377 aa18.07■□□□□ 0.48
ITGB1-215ENST00000488494 XPO4Q9C0E2 1151 aaKnown RBP18.07■□□□□ 0.48
ITGB1-215ENST00000488494 KLC2Q9H0B6 622 aa18.07■□□□□ 0.48
ITGB1-215ENST00000488494 DHX35Q9H5Z1 703 aaKnown RBP18.07■□□□□ 0.48
ITGB1-215ENST00000488494 ARHGAP20Q9P2F6 1191 aa18.07■□□□□ 0.48
ITGB1-215ENST00000488494 CAPN11Q9UMQ6 739 aa18.07■□□□□ 0.48
ITGB1-215ENST00000488494 BZW2Q9Y6E2 419 aaKnown RBP18.07■□□□□ 0.48
ITGB1-215ENST00000488494 A0A1W2PR77 199 aa18.06■□□□□ 0.48
ITGB1-215ENST00000488494 WASH4PA8MWX3 477 aa18.06■□□□□ 0.48
ITGB1-215ENST00000488494 RASA4BC9J798 803 aa18.06■□□□□ 0.48
ITGB1-215ENST00000488494 FLRT2O43155 660 aa18.06■□□□□ 0.48
ITGB1-215ENST00000488494 RASA4O43374 803 aa18.06■□□□□ 0.48
ITGB1-215ENST00000488494 BUB1O43683 1085 aa18.06■□□□□ 0.48
ITGB1-215ENST00000488494 KDELR3O43731 214 aa18.06■□□□□ 0.48
ITGB1-215ENST00000488494 PRPSAP2O60256 369 aa18.06■□□□□ 0.48
ITGB1-215ENST00000488494 RNGTTO60942 597 aaKnown RBP18.06■□□□□ 0.48
ITGB1-215ENST00000488494 RNF8O76064 485 aa18.06■□□□□ 0.48
ITGB1-215ENST00000488494 TMCC1O94876 653 aa18.06■□□□□ 0.48
ITGB1-215ENST00000488494 SERPING1P05155 500 aa18.06■□□□□ 0.48
ITGB1-215ENST00000488494 PRLRP16471 622 aa18.06■□□□□ 0.48
ITGB1-215ENST00000488494 SPINK2P20155 84 aa18.06■□□□□ 0.48
ITGB1-215ENST00000488494 ITGB7P26010 798 aa18.06■□□□□ 0.48
ITGB1-215ENST00000488494 MIPP30301 263 aa18.06■□□□□ 0.48
ITGB1-215ENST00000488494 HTR7P34969 479 aa18.06■□□□□ 0.48
ITGB1-215ENST00000488494 NEK3P51956 506 aa18.06■□□□□ 0.48
ITGB1-215ENST00000488494 HNRNPDQ14103 355 aaKnown RBP18.06■□□□□ 0.48
ITGB1-215ENST00000488494 ZNF423Q2M1K9 1284 aa18.06■□□□□ 0.48
ITGB1-215ENST00000488494 PARP15Q460N3 678 aa18.06■□□□□ 0.48
ITGB1-215ENST00000488494 SETMARQ53H47 684 aaPredicted RBP18.06■□□□□ 0.48
ITGB1-215ENST00000488494 SLC45A4Q5BKX6 768 aa18.06■□□□□ 0.48
ITGB1-215ENST00000488494 ATXN7L2Q5T6C5 722 aaPredicted RBP18.06■□□□□ 0.48
ITGB1-215ENST00000488494 CYP4V2Q6ZWL3 525 aaPredicted RBP18.06■□□□□ 0.48
ITGB1-215ENST00000488494 PARS2Q7L3T8 475 aaKnown RBP18.06■□□□□ 0.48
ITGB1-215ENST00000488494 PRPF39Q86UA1 669 aaKnown RBP18.06■□□□□ 0.48
ITGB1-215ENST00000488494 KCTD15Q96SI1 283 aaPredicted RBP18.06■□□□□ 0.48
ITGB1-215ENST00000488494 ISCUQ9H1K1 167 aa18.06■□□□□ 0.48
ITGB1-215ENST00000488494 MRPL47Q9HD33 250 aaKnown RBP18.06■□□□□ 0.48
ITGB1-215ENST00000488494 HECAQ9UBI9 543 aaPredicted RBP18.06■□□□□ 0.48
ITGB1-215ENST00000488494 PCOLCE2Q9UKZ9 415 aa18.06■□□□□ 0.48
ITGB1-215ENST00000488494 DMTF1Q9Y222 760 aa18.06■□□□□ 0.48
ITGB1-215ENST00000488494 PCDHGB2Q9Y5G2 931 aa18.06■□□□□ 0.48
ITGB1-215ENST00000488494 AKAP13Q12802 2813 aa18.05■□□□□ 0.48
ITGB1-215ENST00000488494 A0A1W2PQU0 124 aa18.05■□□□□ 0.48
ITGB1-215ENST00000488494 ZSCAN5CA6NGD5 496 aaPredicted RBP18.05■□□□□ 0.48
ITGB1-215ENST00000488494 EEF2KO00418 725 aaKnown RBP18.05■□□□□ 0.48
ITGB1-215ENST00000488494 KRIT1O00522 736 aa18.05■□□□□ 0.48
ITGB1-215ENST00000488494 CBFA2T3O75081 653 aa18.05■□□□□ 0.48
ITGB1-215ENST00000488494 LRCH4O75427 683 aa18.05■□□□□ 0.48
ITGB1-215ENST00000488494 TOP3BO95985 862 aaKnown RBP18.05■□□□□ 0.48
ITGB1-215ENST00000488494 GSRP00390 522 aa18.05■□□□□ 0.48
ITGB1-215ENST00000488494 TPM3P06753 285 aa18.05■□□□□ 0.48
ITGB1-215ENST00000488494 GKP32189 559 aa18.05■□□□□ 0.48
ITGB1-215ENST00000488494 NUDT1P36639 197 aa18.05■□□□□ 0.48
ITGB1-215ENST00000488494 NXPH1P58417 271 aa18.05■□□□□ 0.48
ITGB1-215ENST00000488494 YBEYP58557 167 aaPredicted RBP18.05■□□□□ 0.48
ITGB1-215ENST00000488494 CCDC15Q0P6D6 951 aa18.05■□□□□ 0.48
ITGB1-215ENST00000488494 TRIP6Q15654 476 aaKnown RBP18.05■□□□□ 0.48
ITGB1-215ENST00000488494 UMODL1-AS1Q8N2C9 162 aa18.05■□□□□ 0.48
ITGB1-215ENST00000488494 OR2AP1Q8NGE2 309 aa18.05■□□□□ 0.48
ITGB1-215ENST00000488494 MYOCQ99972 504 aa18.05■□□□□ 0.48
ITGB1-215ENST00000488494 THAP2Q9H0W7 228 aa18.05■□□□□ 0.48
ITGB1-215ENST00000488494 WASF3Q9UPY6 502 aa18.05■□□□□ 0.48
ITGB1-215ENST00000488494 CA5BQ9Y2D0 317 aa18.05■□□□□ 0.48
ITGB1-215ENST00000488494 BTBD3Q9Y2F9 522 aa18.05■□□□□ 0.48
ITGB1-215ENST00000488494 LUC7L2Q9Y383 392 aaKnown RBP18.05■□□□□ 0.48
ITGB1-215ENST00000488494 PCDHB9Q9Y5E1 797 aa18.05■□□□□ 0.48
ITGB1-215ENST00000488494 EPG5Q9HCE0 2579 aa18.04■□□□□ 0.48
ITGB1-215ENST00000488494 EIF3CLB5ME19 914 aaKnown RBP18.04■□□□□ 0.48
ITGB1-215ENST00000488494 ADRB3P13945 408 aa18.04■□□□□ 0.48
ITGB1-215ENST00000488494 CASP14P31944 242 aa18.04■□□□□ 0.48
ITGB1-215ENST00000488494 SERINC3Q13530 473 aa18.04■□□□□ 0.48
ITGB1-215ENST00000488494 ZNF284Q2VY69 593 aa18.04■□□□□ 0.48
ITGB1-215ENST00000488494 PPP6R3Q5H9R7 873 aaPredicted RBP18.04■□□□□ 0.48
ITGB1-215ENST00000488494 ERMARDQ5T6L9 678 aa18.04■□□□□ 0.48
ITGB1-215ENST00000488494 SEL1L3Q68CR1 1132 aa18.04■□□□□ 0.48
ITGB1-215ENST00000488494 RFX8Q6ZV50 586 aa18.04■□□□□ 0.48
ITGB1-215ENST00000488494 HORMAD1Q86X24 394 aa18.04■□□□□ 0.48
ITGB1-215ENST00000488494 NETO2Q8NC67 525 aa18.04■□□□□ 0.48
ITGB1-215ENST00000488494 KLK6Q92876 244 aa18.04■□□□□ 0.48
ITGB1-215ENST00000488494 CELF6Q96J87 481 aaKnown RBP18.04■□□□□ 0.48
ITGB1-215ENST00000488494 GDAP1L1Q96MZ0 367 aa18.04■□□□□ 0.48
ITGB1-215ENST00000488494 ELF4Q99607 663 aaPredicted RBP18.04■□□□□ 0.48
ITGB1-215ENST00000488494 EIF3CQ99613 913 aaKnown RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms