RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 PNMA6AP0CW24 399 aaPredicted RBP6.16□□□□□ -1.42
CDHR3-213ENST00000488386 RALAP11233 206 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 VDRP11473 427 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 KRT5P13647 590 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 TRIM21P19474 475 aaKnown RBP6.16□□□□□ -1.42
CDHR3-213ENST00000488386 SLC9A1P19634 815 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 HOXC12P31275 282 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 L1CAMP32004 1257 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 SGSHP51688 502 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 CREB5Q02930 508 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 ENPEPQ07075 957 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 BST2Q10589 180 aaKnown RBP6.16□□□□□ -1.42
CDHR3-213ENST00000488386 ARHGAP44Q17R89 818 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 PLK5Q496M5 336 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 FBXO43Q4G163 708 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 SLC35F1Q5T1Q4 408 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 ADGRF1Q5T601 910 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 FOXB2Q5VYV0 432 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 BTBD8Q5XKL5 378 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 GRAMD4Q6IC98 578 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 PMF1Q6P1K2 205 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 HTR3DQ70Z44 454 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 RSRC2Q7L4I2 434 aaKnown RBP6.16□□□□□ -1.42
CDHR3-213ENST00000488386 DGLUCYQ7Z3D6 616 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 CACNA2D4Q7Z3S7 1137 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 FMNL3Q8IVF7 1028 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 TERB1Q8NA31 727 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 SORCS1Q8WY21 1168 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 SGSM3Q96HU1 749 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 CNOT6LQ96LI5 555 aaKnown RBP6.16□□□□□ -1.42
CDHR3-213ENST00000488386 SRPK1Q96SB4 655 aaKnown RBP6.16□□□□□ -1.42
CDHR3-213ENST00000488386 AARSD1Q9BTE6 412 aaKnown RBP6.16□□□□□ -1.42
CDHR3-213ENST00000488386 SPATA9Q9BWV2 254 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 KRTAP4-8Q9BYQ9 185 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 MIS12Q9H081 205 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 LRRC4Q9HBW1 653 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 METTL14Q9HCE5 456 aaKnown RBP6.16□□□□□ -1.42
CDHR3-213ENST00000488386 TNFRSF12AQ9NP84 129 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 CHMP5Q9NZZ3 219 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 MARCH2Q9P0N8 246 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 BCCIPQ9P287 314 aaKnown RBP eCLIP6.16□□□□□ -1.42
CDHR3-213ENST00000488386 DEC1Q9P2X7 70 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 GULP1Q9UBP9 304 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 HESX1Q9UBX0 185 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 MBD1Q9UIS9 605 aaPredicted RBP6.16□□□□□ -1.42
CDHR3-213ENST00000488386 FBXL7Q9UJT9 491 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 LSM7Q9UK45 103 aaKnown RBP6.16□□□□□ -1.42
CDHR3-213ENST00000488386 AGO1Q9UL18 857 aaKnown RBP6.16□□□□□ -1.42
CDHR3-213ENST00000488386 CEP192Q8TEP8 1941 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 ADAMTS9Q9P2N4 1935 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 NUP205Q92621 2012 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 GVINP1Q7Z2Y8 2422 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.15□□□□□ -1.42
CDHR3-213ENST00000488386 BICDL2A1A5D9 508 aa6.15□□□□□ -1.42
CDHR3-213ENST00000488386 PAX4O43316 350 aa6.15□□□□□ -1.42
CDHR3-213ENST00000488386 DLX3O60479 287 aa6.15□□□□□ -1.42
CDHR3-213ENST00000488386 EPN2O95208 641 aa6.15□□□□□ -1.42
CDHR3-213ENST00000488386 ZBED1O96006 694 aa6.15□□□□□ -1.42
CDHR3-213ENST00000488386 AFPP02771 609 aaKnown RBP6.15□□□□□ -1.42
CDHR3-213ENST00000488386 CISD3P0C7P0 127 aa6.15□□□□□ -1.42
CDHR3-213ENST00000488386 HOXB2P14652 356 aa6.15□□□□□ -1.42
CDHR3-213ENST00000488386 PNLIPP16233 465 aa6.15□□□□□ -1.42
CDHR3-213ENST00000488386 GABRG2P18507 467 aa6.15□□□□□ -1.42
CDHR3-213ENST00000488386 TBXAS1P24557 533 aaPredicted RBP6.15□□□□□ -1.42
CDHR3-213ENST00000488386 CNR2P34972 360 aa6.15□□□□□ -1.42
CDHR3-213ENST00000488386 MPLP40238 635 aa6.15□□□□□ -1.42
CDHR3-213ENST00000488386 USP8P40818 1118 aa6.15□□□□□ -1.42
CDHR3-213ENST00000488386 DHPSP49366 369 aaPredicted RBP6.15□□□□□ -1.42
CDHR3-213ENST00000488386 BCAT1P54687 386 aa6.15□□□□□ -1.42
CDHR3-213ENST00000488386 DAOAP59103 153 aa6.15□□□□□ -1.42
CDHR3-213ENST00000488386 UBE2HP62256 183 aa6.15□□□□□ -1.42
CDHR3-213ENST00000488386 MRPS21P82921 87 aaKnown RBP6.15□□□□□ -1.42
CDHR3-213ENST00000488386 GOLGA8FQ08AF8 430 aa6.15□□□□□ -1.42
CDHR3-213ENST00000488386 GOLGA8DPQ0D2H9 430 aa6.15□□□□□ -1.42
CDHR3-213ENST00000488386 CSRP2Q16527 193 aa6.15□□□□□ -1.42
CDHR3-213ENST00000488386 GEN1Q17RS7 908 aa6.15□□□□□ -1.42
CDHR3-213ENST00000488386 DPCR1Q3MIW9 517 aa6.15□□□□□ -1.42
CDHR3-213ENST00000488386 AASDHQ4L235 1098 aaPredicted RBP6.15□□□□□ -1.42
CDHR3-213ENST00000488386 BSPRYQ5W0U4 402 aa6.15□□□□□ -1.42
CDHR3-213ENST00000488386 DENND1BQ6P3S1 775 aa6.15□□□□□ -1.42
CDHR3-213ENST00000488386 RFWD3Q6PCD5 774 aa6.15□□□□□ -1.42
CDHR3-213ENST00000488386 RASSF3Q86WH2 238 aa6.15□□□□□ -1.42
CDHR3-213ENST00000488386 IRF2BP1Q8IU81 584 aa6.15□□□□□ -1.42
CDHR3-213ENST00000488386 PASD1Q8IV76 773 aa6.15□□□□□ -1.42
CDHR3-213ENST00000488386 ELOA2Q8IYF1 753 aaPredicted RBP6.15□□□□□ -1.42
CDHR3-213ENST00000488386 TMEFF1Q8IYR6 380 aa6.15□□□□□ -1.42
CDHR3-213ENST00000488386 SIX6OS1Q8N1H7 587 aa6.15□□□□□ -1.42
CDHR3-213ENST00000488386 CAMKK1Q8N5S9 505 aa6.15□□□□□ -1.42
CDHR3-213ENST00000488386 ZNF366Q8N895 744 aa6.15□□□□□ -1.42
CDHR3-213ENST00000488386 WFDC5Q8TCV5 224 aa6.15□□□□□ -1.42
CDHR3-213ENST00000488386 ZNF669Q96BR6 464 aaPredicted RBP6.15□□□□□ -1.42
CDHR3-213ENST00000488386 MYEOVQ96EZ4 313 aa6.15□□□□□ -1.42
CDHR3-213ENST00000488386 PIWIL1Q96J94 861 aaKnown RBP6.15□□□□□ -1.42
CDHR3-213ENST00000488386 IPO9Q96P70 1041 aaKnown RBP6.15□□□□□ -1.42
CDHR3-213ENST00000488386 GTPBP4Q9BZE4 634 aaKnown RBP6.15□□□□□ -1.42
CDHR3-213ENST00000488386 PNPLA8Q9NP80 782 aa6.15□□□□□ -1.42
CDHR3-213ENST00000488386 UBE2TQ9NPD8 197 aaPredicted RBP6.15□□□□□ -1.42
CDHR3-213ENST00000488386 DLL3Q9NYJ7 618 aa6.15□□□□□ -1.42
CDHR3-213ENST00000488386 CYTH4Q9UIA0 394 aa6.15□□□□□ -1.42
CDHR3-213ENST00000488386 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms