RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 MORF4L2Q15014 288 aa11.22□□□□□ -0.61
HDLBP-242ENST00000488013 GEN1Q17RS7 908 aa11.22□□□□□ -0.61
HDLBP-242ENST00000488013 TMEM196Q5HYL7 178 aa11.22□□□□□ -0.61
HDLBP-242ENST00000488013 TEX35Q5T0J7 233 aa11.22□□□□□ -0.61
HDLBP-242ENST00000488013 ARMC3Q5W041 872 aa11.22□□□□□ -0.61
HDLBP-242ENST00000488013 PPP1R21Q6ZMI0 780 aa11.22□□□□□ -0.61
HDLBP-242ENST00000488013 ZNF852Q6ZMS4 543 aa11.22□□□□□ -0.61
HDLBP-242ENST00000488013 ARHGAP36Q6ZRI8 547 aa11.22□□□□□ -0.61
HDLBP-242ENST00000488013 LINC00523Q86TU6 105 aa11.22□□□□□ -0.61
HDLBP-242ENST00000488013 HOOK3Q86VS8 718 aa11.22□□□□□ -0.61
HDLBP-242ENST00000488013 C12orf40Q86WS4 652 aa11.22□□□□□ -0.61
HDLBP-242ENST00000488013 TP53INP2Q8IXH6 220 aa11.22□□□□□ -0.61
HDLBP-242ENST00000488013 PHTF2Q8N3S3 785 aa11.22□□□□□ -0.61
HDLBP-242ENST00000488013 SYNPOQ8N3V7 929 aa11.22□□□□□ -0.61
HDLBP-242ENST00000488013 SH2D3CQ8N5H7 860 aa11.22□□□□□ -0.61
HDLBP-242ENST00000488013 CCDC33Q8N5R6 958 aa11.22□□□□□ -0.61
HDLBP-242ENST00000488013 GPR161Q8N6U8 529 aaKnown RBP11.22□□□□□ -0.61
HDLBP-242ENST00000488013 ST13P5Q8NFI4 369 aaPredicted RBP11.22□□□□□ -0.61
HDLBP-242ENST00000488013 CCDC110Q8TBZ0 833 aa11.22□□□□□ -0.61
HDLBP-242ENST00000488013 SEC14L1Q92503 715 aa11.22□□□□□ -0.61
HDLBP-242ENST00000488013 SNF8Q96H20 258 aa11.22□□□□□ -0.61
HDLBP-242ENST00000488013 GDAP1L1Q96MZ0 367 aa11.22□□□□□ -0.61
HDLBP-242ENST00000488013 AGAP3Q96P47 875 aa11.22□□□□□ -0.61
HDLBP-242ENST00000488013 LRRC1Q9BTT6 524 aa11.22□□□□□ -0.61
HDLBP-242ENST00000488013 FOXP3Q9BZS1 431 aa11.22□□□□□ -0.61
HDLBP-242ENST00000488013 ANAPC1Q9H1A4 1944 aa11.22□□□□□ -0.61
HDLBP-242ENST00000488013 FBRSQ9HAH7 460 aa11.22□□□□□ -0.61
HDLBP-242ENST00000488013 GLOD4Q9HC38 313 aa11.22□□□□□ -0.61
HDLBP-242ENST00000488013 PRDM6Q9NQX0 595 aa11.22□□□□□ -0.61
HDLBP-242ENST00000488013 RAB6BQ9NRW1 208 aa11.22□□□□□ -0.61
HDLBP-242ENST00000488013 TPX2Q9ULW0 747 aaKnown RBP11.22□□□□□ -0.61
HDLBP-242ENST00000488013 ATP8A1Q9Y2Q0 1164 aa11.22□□□□□ -0.61
HDLBP-242ENST00000488013 ZBTB24O43167 697 aaPredicted RBP11.21□□□□□ -0.61
HDLBP-242ENST00000488013 HEXIM1O94992 359 aaKnown RBP11.21□□□□□ -0.61
HDLBP-242ENST00000488013 POP4O95707 220 aaKnown RBP11.21□□□□□ -0.61
HDLBP-242ENST00000488013 SERPINF2P08697 491 aa11.21□□□□□ -0.61
HDLBP-242ENST00000488013 HNRNPLP14866 589 aaKnown RBP eCLIP11.21□□□□□ -0.61
HDLBP-242ENST00000488013 NFKBIAP25963 317 aa11.21□□□□□ -0.61
HDLBP-242ENST00000488013 RPL22P35268 128 aaKnown RBP11.21□□□□□ -0.61
HDLBP-242ENST00000488013 MAGEA6P43360 314 aa11.21□□□□□ -0.61
HDLBP-242ENST00000488013 LMAN1P49257 510 aa11.21□□□□□ -0.61
HDLBP-242ENST00000488013 GEMP55040 296 aa11.21□□□□□ -0.61
HDLBP-242ENST00000488013 GDF10P55107 478 aa11.21□□□□□ -0.61
HDLBP-242ENST00000488013 MRPS21P82921 87 aaKnown RBP11.21□□□□□ -0.61
HDLBP-242ENST00000488013 ITKQ08881 620 aa11.21□□□□□ -0.61
HDLBP-242ENST00000488013 ZBTB17Q13105 803 aa11.21□□□□□ -0.61
HDLBP-242ENST00000488013 MPP3Q13368 585 aa11.21□□□□□ -0.61
HDLBP-242ENST00000488013 SEMA5AQ13591 1074 aa11.21□□□□□ -0.61
HDLBP-242ENST00000488013 LRRC32Q14392 662 aa11.21□□□□□ -0.61
HDLBP-242ENST00000488013 MLF2Q15773 248 aaPredicted RBP11.21□□□□□ -0.61
HDLBP-242ENST00000488013 DGKKQ5KSL6 1271 aa11.21□□□□□ -0.61
HDLBP-242ENST00000488013 DUPD1Q68J44 220 aa11.21□□□□□ -0.61
HDLBP-242ENST00000488013 DSG4Q86SJ6 1040 aa11.21□□□□□ -0.61
HDLBP-242ENST00000488013 PPIL6Q8IXY8 311 aa11.21□□□□□ -0.61
HDLBP-242ENST00000488013 GJD3Q8N144 294 aa11.21□□□□□ -0.61
HDLBP-242ENST00000488013 CNTD1Q8N815 330 aa11.21□□□□□ -0.61
HDLBP-242ENST00000488013 FAM3CQ92520 227 aa11.21□□□□□ -0.61
HDLBP-242ENST00000488013 NUDCD1Q96RS6 583 aa11.21□□□□□ -0.61
HDLBP-242ENST00000488013 TUBGCP5Q96RT8 1024 aa11.21□□□□□ -0.61
HDLBP-242ENST00000488013 SRPK1Q96SB4 655 aaKnown RBP11.21□□□□□ -0.61
HDLBP-242ENST00000488013 LRRC40Q9H9A6 602 aa11.21□□□□□ -0.61
HDLBP-242ENST00000488013 NT5MQ9NPB1 228 aa11.21□□□□□ -0.61
HDLBP-242ENST00000488013 HEBP1Q9NRV9 189 aa11.21□□□□□ -0.61
HDLBP-242ENST00000488013 FAM153AQ9UHL3 310 aa11.21□□□□□ -0.61
HDLBP-242ENST00000488013 FBXL21Q9UKT6 434 aa11.21□□□□□ -0.61
HDLBP-242ENST00000488013 SHOC2Q9UQ13 582 aa11.21□□□□□ -0.61
HDLBP-242ENST00000488013 TTLL3Q9Y4R7 772 aa11.21□□□□□ -0.61
HDLBP-242ENST00000488013 EDDM13A0A1B0GTR0 161 aa11.2□□□□□ -0.62
HDLBP-242ENST00000488013 PRRT4C9JH25 899 aa11.2□□□□□ -0.62
HDLBP-242ENST00000488013 DLL1O00548 723 aa11.2□□□□□ -0.62
HDLBP-242ENST00000488013 ALOX15BO15296 676 aa11.2□□□□□ -0.62
HDLBP-242ENST00000488013 INSIG1O15503 277 aa11.2□□□□□ -0.62
HDLBP-242ENST00000488013 SEC31AO94979 1220 aaKnown RBP11.2□□□□□ -0.62
HDLBP-242ENST00000488013 CD160O95971 181 aa11.2□□□□□ -0.62
HDLBP-242ENST00000488013 SRCP12931 536 aa11.2□□□□□ -0.62
HDLBP-242ENST00000488013 TPSB2P20231 275 aa11.2□□□□□ -0.62
HDLBP-242ENST00000488013 GLDCP23378 1020 aa11.2□□□□□ -0.62
HDLBP-242ENST00000488013 TERF1P54274 439 aa11.2□□□□□ -0.62
HDLBP-242ENST00000488013 RPL26P61254 145 aaKnown RBP11.2□□□□□ -0.62
HDLBP-242ENST00000488013 BASP1P80723 227 aaKnown RBP11.2□□□□□ -0.62
HDLBP-242ENST00000488013 GUCY2DQ02846 1103 aa11.2□□□□□ -0.62
HDLBP-242ENST00000488013 KDSRQ06136 332 aa11.2□□□□□ -0.62
HDLBP-242ENST00000488013 CCDC15Q0P6D6 951 aa11.2□□□□□ -0.62
HDLBP-242ENST00000488013 CYTH1Q15438 398 aa11.2□□□□□ -0.62
HDLBP-242ENST00000488013 TPSAB1Q15661 275 aa11.2□□□□□ -0.62
HDLBP-242ENST00000488013 DLG2Q15700 870 aa11.2□□□□□ -0.62
HDLBP-242ENST00000488013 HNRNPA1L2Q32P51 320 aaKnown RBP11.2□□□□□ -0.62
HDLBP-242ENST00000488013 ACCSLQ4AC99 568 aa11.2□□□□□ -0.62
HDLBP-242ENST00000488013 FNDC3BQ53EP0 1204 aaKnown RBP11.2□□□□□ -0.62
HDLBP-242ENST00000488013 CARD16Q5EG05 197 aa11.2□□□□□ -0.62
HDLBP-242ENST00000488013 NAPEPLDQ6IQ20 393 aa11.2□□□□□ -0.62
HDLBP-242ENST00000488013 C22orf39Q6P5X5 142 aa11.2□□□□□ -0.62
HDLBP-242ENST00000488013 SERPINA13PQ6UXR4 307 aa11.2□□□□□ -0.62
HDLBP-242ENST00000488013 LINGO4Q6UY18 593 aa11.2□□□□□ -0.62
HDLBP-242ENST00000488013 RNF135Q8IUD6 432 aa11.2□□□□□ -0.62
HDLBP-242ENST00000488013 KLHDC8BQ8IXV7 354 aa11.2□□□□□ -0.62
HDLBP-242ENST00000488013 NDUFAF2Q8N183 169 aa11.2□□□□□ -0.62
HDLBP-242ENST00000488013 NETO2Q8NC67 525 aa11.2□□□□□ -0.62
HDLBP-242ENST00000488013 MCUQ8NE86 351 aa11.2□□□□□ -0.62
HDLBP-242ENST00000488013 MYRIPQ8NFW9 859 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms