RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 IL20RBQ6UXL0 311 aa4.03□□□□□ -1.76
HMGB1P36-201ENST00000487709 DEF8Q6ZN54 512 aa4.03□□□□□ -1.76
HMGB1P36-201ENST00000487709 CAMK1DQ8IU85 385 aa4.03□□□□□ -1.76
HMGB1P36-201ENST00000487709 LSM14AQ8ND56 463 aaKnown RBP4.03□□□□□ -1.76
HMGB1P36-201ENST00000487709 ZNF548Q8NEK5 533 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P36-201ENST00000487709 MPLKIPQ8TAP9 179 aa4.03□□□□□ -1.76
HMGB1P36-201ENST00000487709 RAB40AQ8WXH6 277 aa4.03□□□□□ -1.76
HMGB1P36-201ENST00000487709 HDAC2Q92769 488 aaKnown RBP4.03□□□□□ -1.76
HMGB1P36-201ENST00000487709 SAAL1Q96ER3 474 aa4.03□□□□□ -1.76
HMGB1P36-201ENST00000487709 APOPT1Q96IL0 206 aa4.03□□□□□ -1.76
HMGB1P36-201ENST00000487709 ZNF333Q96JL9 665 aa4.03□□□□□ -1.76
HMGB1P36-201ENST00000487709 SIGLEC11Q96RL6 698 aa4.03□□□□□ -1.76
HMGB1P36-201ENST00000487709 EYA3Q99504 573 aa4.03□□□□□ -1.76
HMGB1P36-201ENST00000487709 TRMOQ9BU70 441 aa4.03□□□□□ -1.76
HMGB1P36-201ENST00000487709 GATA5Q9BWX5 397 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P36-201ENST00000487709 PREBQ9HCU5 417 aa4.03□□□□□ -1.76
HMGB1P36-201ENST00000487709 Q9N2J8 555 aa4.03□□□□□ -1.76
HMGB1P36-201ENST00000487709 GGA3Q9NZ52 723 aa4.03□□□□□ -1.76
HMGB1P36-201ENST00000487709 MDFICQ9P1T7 246 aa4.03□□□□□ -1.76
HMGB1P36-201ENST00000487709 UTS2RQ9UKP6 389 aa4.03□□□□□ -1.76
HMGB1P36-201ENST00000487709 LAMP3Q9UQV4 416 aa4.03□□□□□ -1.76
HMGB1P36-201ENST00000487709 KIR2DS5A0A0G2JLQ3 304 aa4.02□□□□□ -1.77
HMGB1P36-201ENST00000487709 ARHGAP10A1A4S6 786 aa4.02□□□□□ -1.77
HMGB1P36-201ENST00000487709 C17orf102A2RUQ5 167 aa4.02□□□□□ -1.77
HMGB1P36-201ENST00000487709 FOXO6A8MYZ6 492 aa4.02□□□□□ -1.77
HMGB1P36-201ENST00000487709 B4DGG1 531 aa4.02□□□□□ -1.77
HMGB1P36-201ENST00000487709 KIR2DS3K7RE56 304 aa4.02□□□□□ -1.77
HMGB1P36-201ENST00000487709 EYA2O00167 538 aa4.02□□□□□ -1.77
HMGB1P36-201ENST00000487709 PER2O15055 1255 aa4.02□□□□□ -1.77
HMGB1P36-201ENST00000487709 SERPINC1P01008 464 aa4.02□□□□□ -1.77
HMGB1P36-201ENST00000487709 IRF1P10914 325 aa4.02□□□□□ -1.77
HMGB1P36-201ENST00000487709 PCNAP12004 261 aa4.02□□□□□ -1.77
HMGB1P36-201ENST00000487709 AVPR2P30518 371 aa4.02□□□□□ -1.77
HMGB1P36-201ENST00000487709 SLC16A2P36021 539 aa4.02□□□□□ -1.77
HMGB1P36-201ENST00000487709 CDKN2AP42771 156 aaKnown RBP4.02□□□□□ -1.77
HMGB1P36-201ENST00000487709 GPR12P47775 334 aa4.02□□□□□ -1.77
HMGB1P36-201ENST00000487709 BLKP51451 505 aa4.02□□□□□ -1.77
HMGB1P36-201ENST00000487709 NAP1L1P55209 391 aaKnown RBP4.02□□□□□ -1.77
HMGB1P36-201ENST00000487709 CDH15P55291 814 aa4.02□□□□□ -1.77
HMGB1P36-201ENST00000487709 PGM5Q15124 567 aa4.02□□□□□ -1.77
HMGB1P36-201ENST00000487709 ZNF628Q5EBL2 1059 aa4.02□□□□□ -1.77
HMGB1P36-201ENST00000487709 KIAA1755Q5JYT7 1200 aa4.02□□□□□ -1.77
HMGB1P36-201ENST00000487709 C6orf10Q5SRN2 563 aa4.02□□□□□ -1.77
HMGB1P36-201ENST00000487709 ACAD10Q6JQN1 1059 aa4.02□□□□□ -1.77
HMGB1P36-201ENST00000487709 B4GALNT4Q76KP1 1039 aa4.02□□□□□ -1.77
HMGB1P36-201ENST00000487709 PIP4P1Q86T03 277 aa4.02□□□□□ -1.77
HMGB1P36-201ENST00000487709 WDR5BQ86VZ2 330 aa4.02□□□□□ -1.77
HMGB1P36-201ENST00000487709 TMC8Q8IU68 726 aa4.02□□□□□ -1.77
HMGB1P36-201ENST00000487709 SLC25A41Q8N5S1 370 aa4.02□□□□□ -1.77
HMGB1P36-201ENST00000487709 C11orf65Q8NCR3 313 aa4.02□□□□□ -1.77
HMGB1P36-201ENST00000487709 NFKBIDQ8NI38 313 aa4.02□□□□□ -1.77
HMGB1P36-201ENST00000487709 TBC1D22AQ8WUA7 517 aa4.02□□□□□ -1.77
HMGB1P36-201ENST00000487709 HDAC7Q8WUI4 952 aa4.02□□□□□ -1.77
HMGB1P36-201ENST00000487709 IP6K1Q92551 441 aa4.02□□□□□ -1.77
HMGB1P36-201ENST00000487709 SKA1Q96BD8 255 aa4.02□□□□□ -1.77
HMGB1P36-201ENST00000487709 RRP36Q96EU6 259 aaKnown RBP4.02□□□□□ -1.77
HMGB1P36-201ENST00000487709 PIMREGQ9BSJ6 248 aa4.02□□□□□ -1.77
HMGB1P36-201ENST00000487709 FUZQ9BT04 418 aa4.02□□□□□ -1.77
HMGB1P36-201ENST00000487709 PAIP1Q9H074 479 aaKnown RBP4.02□□□□□ -1.77
HMGB1P36-201ENST00000487709 FAM234AQ9H0X4 552 aa4.02□□□□□ -1.77
HMGB1P36-201ENST00000487709 HIPK3Q9H422 1215 aa4.02□□□□□ -1.77
HMGB1P36-201ENST00000487709 SMC4Q9NTJ3 1288 aa4.02□□□□□ -1.77
HMGB1P36-201ENST00000487709 TMEM184CQ9NVA4 438 aa4.02□□□□□ -1.77
HMGB1P36-201ENST00000487709 GRHL1Q9NZI5 618 aa4.02□□□□□ -1.77
HMGB1P36-201ENST00000487709 HEY2Q9UBP5 337 aa4.02□□□□□ -1.77
HMGB1P36-201ENST00000487709 RAP2CQ9Y3L5 183 aa4.02□□□□□ -1.77
HMGB1P36-201ENST00000487709 ZMYM2Q9UBW7 1377 aa4.02□□□□□ -1.77
HMGB1P36-201ENST00000487709 A0A096LPK6 155 aa4.01□□□□□ -1.77
HMGB1P36-201ENST00000487709 TEX13CA0A0J9YWL9 993 aa4.01□□□□□ -1.77
HMGB1P36-201ENST00000487709 C17orf113A0A1B0GUU1 675 aa4.01□□□□□ -1.77
HMGB1P36-201ENST00000487709 CEP104O60308 925 aa4.01□□□□□ -1.77
HMGB1P36-201ENST00000487709 RTN3O95197 1032 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P36-201ENST00000487709 DDAH2O95865 285 aa4.01□□□□□ -1.77
HMGB1P36-201ENST00000487709 SYF2O95926 243 aaKnown RBP4.01□□□□□ -1.77
HMGB1P36-201ENST00000487709 TOMM40O96008 361 aa4.01□□□□□ -1.77
HMGB1P36-201ENST00000487709 MYZAPP0CAP1 466 aa4.01□□□□□ -1.77
HMGB1P36-201ENST00000487709 HSPA1AP0DMV8 641 aaKnown RBP4.01□□□□□ -1.77
HMGB1P36-201ENST00000487709 HSPA1BP0DMV9 641 aaKnown RBP4.01□□□□□ -1.77
HMGB1P36-201ENST00000487709 T-ENOLP0DO92 83 aa4.01□□□□□ -1.77
HMGB1P36-201ENST00000487709 RFC1P35251 1148 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P36-201ENST00000487709 MTNR1AP48039 350 aa4.01□□□□□ -1.77
HMGB1P36-201ENST00000487709 ALDH7A1P49419 539 aaKnown RBP4.01□□□□□ -1.77
HMGB1P36-201ENST00000487709 NEXNQ0ZGT2 675 aa4.01□□□□□ -1.77
HMGB1P36-201ENST00000487709 SLC18A3Q16572 532 aa4.01□□□□□ -1.77
HMGB1P36-201ENST00000487709 ZNF585BQ52M93 769 aa4.01□□□□□ -1.77
HMGB1P36-201ENST00000487709 FAM69AQ5T7M9 428 aa4.01□□□□□ -1.77
HMGB1P36-201ENST00000487709 ZNF549Q6P9A3 640 aa4.01□□□□□ -1.77
HMGB1P36-201ENST00000487709 PIM3Q86V86 326 aa4.01□□□□□ -1.77
HMGB1P36-201ENST00000487709 PALB2Q86YC2 1186 aa4.01□□□□□ -1.77
HMGB1P36-201ENST00000487709 CPXM2Q8N436 756 aa4.01□□□□□ -1.77
HMGB1P36-201ENST00000487709 RUFY2Q8WXA3 655 aa4.01□□□□□ -1.77
HMGB1P36-201ENST00000487709 ZUFSPQ96AP4 578 aa4.01□□□□□ -1.77
HMGB1P36-201ENST00000487709 EVI5LQ96CN4 794 aa4.01□□□□□ -1.77
HMGB1P36-201ENST00000487709 WDR83Q9BRX9 315 aaKnown RBP4.01□□□□□ -1.77
HMGB1P36-201ENST00000487709 AAMDCQ9H7C9 122 aa4.01□□□□□ -1.77
HMGB1P36-201ENST00000487709 PNRC2Q9NPJ4 139 aaKnown RBP4.01□□□□□ -1.77
HMGB1P36-201ENST00000487709 THSD1Q9NS62 852 aa4.01□□□□□ -1.77
HMGB1P36-201ENST00000487709 DECR2Q9NUI1 292 aa4.01□□□□□ -1.77
HMGB1P36-201ENST00000487709 TXLNGQ9NUQ3 528 aa4.01□□□□□ -1.77
HMGB1P36-201ENST00000487709 MPP6Q9NZW5 540 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms