RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 CCNCP24863 283 aa11.97□□□□□ -0.49
TRA2B-214ENST00000487615 LBRQ14739 615 aaKnown RBP11.97□□□□□ -0.49
TRA2B-214ENST00000487615 ZNF618Q5T7W0 954 aa11.97□□□□□ -0.49
TRA2B-214ENST00000487615 GLT6D1Q7Z4J2 308 aa11.97□□□□□ -0.49
TRA2B-214ENST00000487615 LCA5Q86VQ0 697 aa11.97□□□□□ -0.49
TRA2B-214ENST00000487615 RBBP8Q99708 897 aa11.97□□□□□ -0.49
TRA2B-214ENST00000487615 ZNF212Q9UDV6 495 aa11.97□□□□□ -0.49
TRA2B-214ENST00000487615 PIRO00625 290 aa11.96□□□□□ -0.49
TRA2B-214ENST00000487615 TSPAN3O60637 253 aa11.96□□□□□ -0.49
TRA2B-214ENST00000487615 PLIN3O60664 434 aa11.96□□□□□ -0.49
TRA2B-214ENST00000487615 RASSF9O75901 435 aa11.96□□□□□ -0.49
TRA2B-214ENST00000487615 ITGALP20701 1170 aa11.96□□□□□ -0.49
TRA2B-214ENST00000487615 GRIA1P42261 906 aa11.96□□□□□ -0.49
TRA2B-214ENST00000487615 SLC25A3Q00325 362 aa11.96□□□□□ -0.49
TRA2B-214ENST00000487615 UBAP2LQ14157 1087 aaKnown RBP11.96□□□□□ -0.49
TRA2B-214ENST00000487615 RETSATQ6NUM9 610 aa11.96□□□□□ -0.49
TRA2B-214ENST00000487615 SNX19Q92543 992 aa11.96□□□□□ -0.49
TRA2B-214ENST00000487615 ING2Q9H160 280 aa11.96□□□□□ -0.49
TRA2B-214ENST00000487615 VPS45Q9NRW7 570 aa11.96□□□□□ -0.49
TRA2B-214ENST00000487615 CACNG4Q9UBN1 327 aa11.96□□□□□ -0.49
TRA2B-214ENST00000487615 SLC27A5Q9Y2P5 690 aa11.96□□□□□ -0.49
TRA2B-214ENST00000487615 PRR5-ARHGAP8B1AHC4 643 aa11.96□□□□□ -0.49
TRA2B-214ENST00000487615 CFAP99D6REC4 459 aa11.96□□□□□ -0.49
TRA2B-214ENST00000487615 IQCF3P0C7M6 154 aa11.96□□□□□ -0.49
TRA2B-214ENST00000487615 ELNP15502 786 aa11.96□□□□□ -0.49
TRA2B-214ENST00000487615 ARHGAP8P85298 464 aa11.96□□□□□ -0.49
TRA2B-214ENST00000487615 CYTH1Q15438 398 aa11.96□□□□□ -0.49
TRA2B-214ENST00000487615 FAM182AQ5T1J6 154 aa11.96□□□□□ -0.49
TRA2B-214ENST00000487615 ANKS3Q6ZW76 656 aa11.96□□□□□ -0.49
TRA2B-214ENST00000487615 MRPL57Q9BQC6 102 aaKnown RBP11.96□□□□□ -0.49
TRA2B-214ENST00000487615 PIDD1Q9HB75 910 aa11.96□□□□□ -0.49
TRA2B-214ENST00000487615 PNPOQ9NVS9 261 aa11.96□□□□□ -0.49
TRA2B-214ENST00000487615 GTF2IRD1Q9UHL9 959 aa11.96□□□□□ -0.49
TRA2B-214ENST00000487615 C2orf71A6NGG8 1288 aa11.96□□□□□ -0.5
TRA2B-214ENST00000487615 TLR5O60602 858 aa11.96□□□□□ -0.5
TRA2B-214ENST00000487615 HSPA1AP0DMV8 641 aaKnown RBP11.96□□□□□ -0.5
TRA2B-214ENST00000487615 HSPA1BP0DMV9 641 aaKnown RBP11.96□□□□□ -0.5
TRA2B-214ENST00000487615 CAPRIN1Q14444 709 aaKnown RBP11.96□□□□□ -0.5
TRA2B-214ENST00000487615 PSMD5Q16401 504 aa11.96□□□□□ -0.5
TRA2B-214ENST00000487615 AASDHQ4L235 1098 aaPredicted RBP11.96□□□□□ -0.5
TRA2B-214ENST00000487615 PPM1JQ5JR12 505 aa11.96□□□□□ -0.5
TRA2B-214ENST00000487615 TMTC4Q5T4D3 741 aa11.96□□□□□ -0.5
TRA2B-214ENST00000487615 SWT1Q5T5J6 900 aaKnown RBP11.96□□□□□ -0.5
TRA2B-214ENST00000487615 OSTM1Q86WC4 334 aa11.96□□□□□ -0.5
TRA2B-214ENST00000487615 FBXO39Q8N4B4 442 aa11.96□□□□□ -0.5
TRA2B-214ENST00000487615 SPPL2BQ8TCT7 592 aa11.96□□□□□ -0.5
TRA2B-214ENST00000487615 SLC24A3Q9HC58 644 aa11.96□□□□□ -0.5
TRA2B-214ENST00000487615 MAN1C1Q9NR34 630 aa11.96□□□□□ -0.5
TRA2B-214ENST00000487615 UXTQ9UBK9 157 aaPredicted RBP11.96□□□□□ -0.5
TRA2B-214ENST00000487615 FAF1Q9UNN5 650 aaPredicted RBP11.96□□□□□ -0.5
TRA2B-214ENST00000487615 SNX10Q9Y5X0 201 aa11.96□□□□□ -0.5
TRA2B-214ENST00000487615 LY75O60449 1722 aa11.96□□□□□ -0.5
TRA2B-214ENST00000487615 MGRN1O60291 552 aa11.96□□□□□ -0.5
TRA2B-214ENST00000487615 CAPN15O75808 1086 aa11.96□□□□□ -0.5
TRA2B-214ENST00000487615 PPP1R15BQ5SWA1 713 aa11.96□□□□□ -0.5
TRA2B-214ENST00000487615 ANGPTL8Q6UXH0 198 aa11.96□□□□□ -0.5
TRA2B-214ENST00000487615 MPP5Q8N3R9 675 aa11.96□□□□□ -0.5
TRA2B-214ENST00000487615 C10orf82Q8WW14 230 aa11.96□□□□□ -0.5
TRA2B-214ENST00000487615 TEKT5Q96M29 485 aa11.96□□□□□ -0.5
TRA2B-214ENST00000487615 NDNQ99608 321 aa11.96□□□□□ -0.5
TRA2B-214ENST00000487615 UTP6Q9NYH9 597 aaKnown RBP11.96□□□□□ -0.5
TRA2B-214ENST00000487615 WWOXQ9NZC7 414 aa11.96□□□□□ -0.5
TRA2B-214ENST00000487615 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.96□□□□□ -0.5
TRA2B-214ENST00000487615 DNMT3LQ9UJW3 386 aa11.96□□□□□ -0.5
TRA2B-214ENST00000487615 ZNF487B1APH4 448 aa11.95□□□□□ -0.5
TRA2B-214ENST00000487615 BUD23O43709 281 aaKnown RBP11.95□□□□□ -0.5
TRA2B-214ENST00000487615 UGT1A9O60656 530 aa11.95□□□□□ -0.5
TRA2B-214ENST00000487615 WFS1O76024 890 aa11.95□□□□□ -0.5
TRA2B-214ENST00000487615 USP4Q13107 963 aa11.95□□□□□ -0.5
TRA2B-214ENST00000487615 FASTKQ14296 549 aaKnown RBP11.95□□□□□ -0.5
TRA2B-214ENST00000487615 TMCO4Q5TGY1 634 aa11.95□□□□□ -0.5
TRA2B-214ENST00000487615 ANKS6Q68DC2 871 aa11.95□□□□□ -0.5
TRA2B-214ENST00000487615 NET1Q7Z628 596 aaPredicted RBP11.95□□□□□ -0.5
TRA2B-214ENST00000487615 MFN1Q8IWA4 741 aa11.95□□□□□ -0.5
TRA2B-214ENST00000487615 ATAD1Q8NBU5 361 aa11.95□□□□□ -0.5
TRA2B-214ENST00000487615 GPR152Q8TDT2 470 aa11.95□□□□□ -0.5
TRA2B-214ENST00000487615 NRBF2Q96F24 287 aa11.95□□□□□ -0.5
TRA2B-214ENST00000487615 KLHL5Q96PQ7 755 aa11.95□□□□□ -0.5
TRA2B-214ENST00000487615 OMDQ99983 421 aa11.95□□□□□ -0.5
TRA2B-214ENST00000487615 KLHL4Q9C0H6 718 aa11.95□□□□□ -0.5
TRA2B-214ENST00000487615 YY1AP1Q9H869 796 aa11.95□□□□□ -0.5
TRA2B-214ENST00000487615 UGT1A7Q9HAW7 530 aa11.95□□□□□ -0.5
TRA2B-214ENST00000487615 UGT1A10Q9HAW8 530 aa11.95□□□□□ -0.5
TRA2B-214ENST00000487615 UGT1A8Q9HAW9 530 aa11.95□□□□□ -0.5
TRA2B-214ENST00000487615 CATSPERZQ9NTU4 200 aa11.95□□□□□ -0.5
TRA2B-214ENST00000487615 PDP2Q9P2J9 529 aa11.95□□□□□ -0.5
TRA2B-214ENST00000487615 ARHGAP10A1A4S6 786 aa11.95□□□□□ -0.5
TRA2B-214ENST00000487615 E9PAM4 449 aa11.95□□□□□ -0.5
TRA2B-214ENST00000487615 GSC2O15499 205 aa11.95□□□□□ -0.5
TRA2B-214ENST00000487615 MYO1DO94832 1006 aa11.95□□□□□ -0.5
TRA2B-214ENST00000487615 PTDSS1P48651 473 aaKnown RBP11.95□□□□□ -0.5
TRA2B-214ENST00000487615 ARHGDIAP52565 204 aa11.95□□□□□ -0.5
TRA2B-214ENST00000487615 NME5P56597 212 aa11.95□□□□□ -0.5
TRA2B-214ENST00000487615 NOGQ13253 232 aa11.95□□□□□ -0.5
TRA2B-214ENST00000487615 MPP2Q14168 576 aa11.95□□□□□ -0.5
TRA2B-214ENST00000487615 HECTD3Q5T447 861 aa11.95□□□□□ -0.5
TRA2B-214ENST00000487615 ACBD5Q5T8D3 534 aaPredicted RBP11.95□□□□□ -0.5
TRA2B-214ENST00000487615 AP1ARQ63HQ0 302 aa11.95□□□□□ -0.5
TRA2B-214ENST00000487615 HFE2Q6ZVN8 426 aa11.95□□□□□ -0.5
TRA2B-214ENST00000487615 SPATA22Q8NHS9 363 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms