RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 ISG20Q96AZ6 181 aaKnown RBP12.97□□□□□ -0.33
PRDM2-208ENST00000487453 C16orf45Q96MC5 204 aaPredicted RBP12.97□□□□□ -0.33
PRDM2-208ENST00000487453 TSGA13Q96PP4 275 aa12.97□□□□□ -0.33
PRDM2-208ENST00000487453 OSBPL9Q96SU4 736 aa12.97□□□□□ -0.33
PRDM2-208ENST00000487453 CEP41Q9BYV8 373 aa12.97□□□□□ -0.33
PRDM2-208ENST00000487453 MKRN2Q9H000 416 aaKnown RBP12.97□□□□□ -0.33
PRDM2-208ENST00000487453 ZDHHC6Q9H6R6 413 aa12.97□□□□□ -0.33
PRDM2-208ENST00000487453 FBRSQ9HAH7 460 aa12.97□□□□□ -0.33
PRDM2-208ENST00000487453 HAUS2Q9NVX0 235 aa12.97□□□□□ -0.33
PRDM2-208ENST00000487453 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.97□□□□□ -0.33
PRDM2-208ENST00000487453 LHX3Q9UBR4 397 aa12.97□□□□□ -0.33
PRDM2-208ENST00000487453 SEPT3Q9UH03 358 aa12.97□□□□□ -0.33
PRDM2-208ENST00000487453 FBXO4Q9UKT5 387 aa12.97□□□□□ -0.33
PRDM2-208ENST00000487453 SNX12Q9UMY4 172 aa12.97□□□□□ -0.33
PRDM2-208ENST00000487453 KRIT1O00522 736 aa12.96□□□□□ -0.33
PRDM2-208ENST00000487453 MATN3O15232 486 aa12.96□□□□□ -0.33
PRDM2-208ENST00000487453 GALR2O43603 387 aaPredicted RBP12.96□□□□□ -0.33
PRDM2-208ENST00000487453 PEX11BO96011 259 aa12.96□□□□□ -0.33
PRDM2-208ENST00000487453 GSRP00390 522 aa12.96□□□□□ -0.33
PRDM2-208ENST00000487453 IL1BP01584 269 aa12.96□□□□□ -0.33
PRDM2-208ENST00000487453 FGGP02679 453 aa12.96□□□□□ -0.33
PRDM2-208ENST00000487453 DNTTP04053 509 aa12.96□□□□□ -0.33
PRDM2-208ENST00000487453 ACADMP11310 421 aa12.96□□□□□ -0.33
PRDM2-208ENST00000487453 CCNB1P14635 433 aa12.96□□□□□ -0.33
PRDM2-208ENST00000487453 RENBPP51606 427 aa12.96□□□□□ -0.33
PRDM2-208ENST00000487453 ITKQ08881 620 aa12.96□□□□□ -0.33
PRDM2-208ENST00000487453 PRKD1Q15139 912 aaPredicted RBP12.96□□□□□ -0.33
PRDM2-208ENST00000487453 CYTH1Q15438 398 aa12.96□□□□□ -0.33
PRDM2-208ENST00000487453 CARD16Q5EG05 197 aa12.96□□□□□ -0.33
PRDM2-208ENST00000487453 MAMSTRQ6ZN01 415 aa12.96□□□□□ -0.33
PRDM2-208ENST00000487453 DPY19L3Q6ZPD9 716 aa12.96□□□□□ -0.33
PRDM2-208ENST00000487453 TMPRSS6Q8IU80 811 aa12.96□□□□□ -0.33
PRDM2-208ENST00000487453 MMAAQ8IVH4 418 aaKnown RBP12.96□□□□□ -0.33
PRDM2-208ENST00000487453 CDKL3Q8IVW4 592 aaPredicted RBP12.96□□□□□ -0.33
PRDM2-208ENST00000487453 MAML2Q8IZL2 1156 aaPredicted RBP12.96□□□□□ -0.33
PRDM2-208ENST00000487453 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.96□□□□□ -0.33
PRDM2-208ENST00000487453 CHST14Q8NCH0 376 aa12.96□□□□□ -0.33
PRDM2-208ENST00000487453 SIPA1Q96FS4 1042 aa12.96□□□□□ -0.33
PRDM2-208ENST00000487453 PBKQ96KB5 322 aa12.96□□□□□ -0.33
PRDM2-208ENST00000487453 MRGPRX1Q96LB2 322 aa12.96□□□□□ -0.33
PRDM2-208ENST00000487453 QKIQ96PU8 341 aaKnown RBP eCLIP12.96□□□□□ -0.33
PRDM2-208ENST00000487453 BRD8Q9H0E9 1235 aa12.96□□□□□ -0.33
PRDM2-208ENST00000487453 RSPH9Q9H1X1 276 aaPredicted RBP12.96□□□□□ -0.33
PRDM2-208ENST00000487453 CD248Q9HCU0 757 aa12.96□□□□□ -0.33
PRDM2-208ENST00000487453 NT5MQ9NPB1 228 aa12.96□□□□□ -0.33
PRDM2-208ENST00000487453 HECAQ9UBI9 543 aaPredicted RBP12.96□□□□□ -0.33
PRDM2-208ENST00000487453 IL36AQ9UHA7 158 aa12.96□□□□□ -0.33
PRDM2-208ENST00000487453 F5P12259 2224 aa12.96□□□□□ -0.34
PRDM2-208ENST00000487453 HACD1B0YJ81 288 aa12.95□□□□□ -0.34
PRDM2-208ENST00000487453 C1QTNF3-AMACRE9PGA6 284 aa12.95□□□□□ -0.34
PRDM2-208ENST00000487453 KPNA3O00505 521 aaPredicted RBP12.95□□□□□ -0.34
PRDM2-208ENST00000487453 ALOX15BO15296 676 aa12.95□□□□□ -0.34
PRDM2-208ENST00000487453 ZNF821O75541 412 aaPredicted RBP12.95□□□□□ -0.34
PRDM2-208ENST00000487453 RBP3P10745 1247 aa12.95□□□□□ -0.34
PRDM2-208ENST00000487453 TCP1P17987 556 aaKnown RBP12.95□□□□□ -0.34
PRDM2-208ENST00000487453 CASQ1P31415 396 aa12.95□□□□□ -0.34
PRDM2-208ENST00000487453 GKP32189 559 aa12.95□□□□□ -0.34
PRDM2-208ENST00000487453 CHRNA3P32297 505 aa12.95□□□□□ -0.34
PRDM2-208ENST00000487453 HSPA9P38646 679 aaKnown RBP12.95□□□□□ -0.34
PRDM2-208ENST00000487453 RGRP47804 291 aa12.95□□□□□ -0.34
PRDM2-208ENST00000487453 FNTBP49356 437 aa12.95□□□□□ -0.34
PRDM2-208ENST00000487453 NUBP1P53384 320 aa12.95□□□□□ -0.34
PRDM2-208ENST00000487453 MAXP61244 160 aa12.95□□□□□ -0.34
PRDM2-208ENST00000487453 ZNF33AQ06730 810 aa12.95□□□□□ -0.34
PRDM2-208ENST00000487453 DMWDQ09019 674 aa12.95□□□□□ -0.34
PRDM2-208ENST00000487453 ZBTB17Q13105 803 aa12.95□□□□□ -0.34
PRDM2-208ENST00000487453 XRCC4Q13426 336 aa12.95□□□□□ -0.34
PRDM2-208ENST00000487453 HNRNPDQ14103 355 aaKnown RBP12.95□□□□□ -0.34
PRDM2-208ENST00000487453 CST6Q15828 149 aa12.95□□□□□ -0.34
PRDM2-208ENST00000487453 POM121L1PQ3SYA9 428 aa12.95□□□□□ -0.34
PRDM2-208ENST00000487453 SLC45A4Q5BKX6 768 aa12.95□□□□□ -0.34
PRDM2-208ENST00000487453 DARS2Q6PI48 645 aaKnown RBP12.95□□□□□ -0.34
PRDM2-208ENST00000487453 SYT10Q6XYQ8 523 aa12.95□□□□□ -0.34
PRDM2-208ENST00000487453 RASSF3Q86WH2 238 aa12.95□□□□□ -0.34
PRDM2-208ENST00000487453 PAF1Q8N7H5 531 aa12.95□□□□□ -0.34
PRDM2-208ENST00000487453 MAIP1Q8WWC4 291 aa12.95□□□□□ -0.34
PRDM2-208ENST00000487453 ATG4AQ8WYN0 398 aa12.95□□□□□ -0.34
PRDM2-208ENST00000487453 MAML1Q92585 1016 aa12.95□□□□□ -0.34
PRDM2-208ENST00000487453 MS4A14Q96JA4 679 aa12.95□□□□□ -0.34
PRDM2-208ENST00000487453 PSKH2Q96QS6 385 aa12.95□□□□□ -0.34
PRDM2-208ENST00000487453 FERMT1Q9BQL6 677 aa12.95□□□□□ -0.34
PRDM2-208ENST00000487453 HEPHQ9BQS7 1158 aa12.95□□□□□ -0.34
PRDM2-208ENST00000487453 RBM22Q9NW64 420 aaKnown RBP eCLIP12.95□□□□□ -0.34
PRDM2-208ENST00000487453 EVLQ9UI08 416 aaPredicted RBP12.95□□□□□ -0.34
PRDM2-208ENST00000487453 R3HDM2Q9Y2K5 976 aaKnown RBP12.95□□□□□ -0.34
PRDM2-208ENST00000487453 NUP205Q92621 2012 aa12.95□□□□□ -0.34
PRDM2-208ENST00000487453 NCOR1O75376 2440 aa12.94□□□□□ -0.34
PRDM2-208ENST00000487453 RNF103O00237 685 aa12.94□□□□□ -0.34
PRDM2-208ENST00000487453 PGRMC1O00264 195 aaKnown RBP12.94□□□□□ -0.34
PRDM2-208ENST00000487453 MUSKO15146 869 aa12.94□□□□□ -0.34
PRDM2-208ENST00000487453 AXIN1O15169 862 aa12.94□□□□□ -0.34
PRDM2-208ENST00000487453 ZNF185O15231 689 aa12.94□□□□□ -0.34
PRDM2-208ENST00000487453 MTSS1O43312 755 aa12.94□□□□□ -0.34
PRDM2-208ENST00000487453 GJB3O75712 270 aa12.94□□□□□ -0.34
PRDM2-208ENST00000487453 ADH1BP00325 375 aa12.94□□□□□ -0.34
PRDM2-208ENST00000487453 PRNPP04156 253 aa12.94□□□□□ -0.34
PRDM2-208ENST00000487453 HLA-DQB2P05538 268 aa12.94□□□□□ -0.34
PRDM2-208ENST00000487453 CTSLP07711 333 aa12.94□□□□□ -0.34
PRDM2-208ENST00000487453 SP9P0CG40 484 aa12.94□□□□□ -0.34
PRDM2-208ENST00000487453 RBL1P28749 1068 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms