RNA–Protein interactions for RNA: ENST00000487447.1

CLIP2-207, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-207ENST00000487447 EXD1Q8NHP7 514 aa11.86□□□□□ -0.51
CLIP2-207ENST00000487447 RLN3Q8WXF3 142 aa11.86□□□□□ -0.51
CLIP2-207ENST00000487447 KRT35Q92764 455 aa11.86□□□□□ -0.51
CLIP2-207ENST00000487447 TSGA13Q96PP4 275 aa11.86□□□□□ -0.51
CLIP2-207ENST00000487447 NCDNQ9UBB6 729 aa11.86□□□□□ -0.51
CLIP2-207ENST00000487447 UBA2Q9UBT2 640 aaPredicted RBP11.86□□□□□ -0.51
CLIP2-207ENST00000487447 IPO11Q9UI26 975 aaKnown RBP11.86□□□□□ -0.51
CLIP2-207ENST00000487447 SARDHQ9UL12 918 aa11.86□□□□□ -0.51
CLIP2-207ENST00000487447 CYP8B1Q9UNU6 501 aa11.86□□□□□ -0.51
CLIP2-207ENST00000487447 THADAQ6YHU6 1953 aa11.86□□□□□ -0.51
CLIP2-207ENST00000487447 CEP250Q9BV73 2442 aa11.86□□□□□ -0.51
CLIP2-207ENST00000487447 ANKRD36A6QL64 1941 aa11.86□□□□□ -0.51
CLIP2-207ENST00000487447 SHROOM3Q8TF72 1996 aa11.85□□□□□ -0.51
CLIP2-207ENST00000487447 DCHS1Q96JQ0 3298 aa11.85□□□□□ -0.51
CLIP2-207ENST00000487447 hCG_1818297A0A087WSY0 165 aa11.85□□□□□ -0.51
CLIP2-207ENST00000487447 MIF4GDA9UHW6 222 aaKnown RBP11.85□□□□□ -0.51
CLIP2-207ENST00000487447 C1QTNF3-AMACRE9PGA6 284 aa11.85□□□□□ -0.51
CLIP2-207ENST00000487447 DFFAO00273 331 aa11.85□□□□□ -0.51
CLIP2-207ENST00000487447 MID1O15344 667 aa11.85□□□□□ -0.51
CLIP2-207ENST00000487447 SLC7A4O43246 635 aa11.85□□□□□ -0.51
CLIP2-207ENST00000487447 KRT86O43790 486 aa11.85□□□□□ -0.51
CLIP2-207ENST00000487447 NRDCO43847 1150 aa11.85□□□□□ -0.51
CLIP2-207ENST00000487447 RHOBTB1O94844 696 aa11.85□□□□□ -0.51
CLIP2-207ENST00000487447 PRNPP04156 253 aa11.85□□□□□ -0.51
CLIP2-207ENST00000487447 ACADMP11310 421 aa11.85□□□□□ -0.51
CLIP2-207ENST00000487447 CHRNA3P32297 505 aa11.85□□□□□ -0.51
CLIP2-207ENST00000487447 SLC8A1P32418 973 aa11.85□□□□□ -0.51
CLIP2-207ENST00000487447 GARSP41250 739 aaKnown RBP11.85□□□□□ -0.51
CLIP2-207ENST00000487447 CSNK1DP48730 415 aa11.85□□□□□ -0.51
CLIP2-207ENST00000487447 COPS2P61201 443 aa11.85□□□□□ -0.51
CLIP2-207ENST00000487447 SNRPD1P62314 119 aaKnown RBP11.85□□□□□ -0.51
CLIP2-207ENST00000487447 GBE1Q04446 702 aa11.85□□□□□ -0.51
CLIP2-207ENST00000487447 ZNF33AQ06730 810 aa11.85□□□□□ -0.51
CLIP2-207ENST00000487447 SFSWAPQ12872 951 aaKnown RBP11.85□□□□□ -0.51
CLIP2-207ENST00000487447 FAM46CQ5VWP2 391 aa11.85□□□□□ -0.51
CLIP2-207ENST00000487447 MFSD7Q6UXD7 560 aa11.85□□□□□ -0.51
CLIP2-207ENST00000487447 SPOCD1Q6ZMY3 1216 aa11.85□□□□□ -0.51
CLIP2-207ENST00000487447 MMAAQ8IVH4 418 aaKnown RBP11.85□□□□□ -0.51
CLIP2-207ENST00000487447 RCOR2Q8IZ40 523 aa11.85□□□□□ -0.51
CLIP2-207ENST00000487447 TEX26Q8N6G2 289 aa11.85□□□□□ -0.51
CLIP2-207ENST00000487447 NETO2Q8NC67 525 aa11.85□□□□□ -0.51
CLIP2-207ENST00000487447 CADM4Q8NFZ8 388 aa11.85□□□□□ -0.51
CLIP2-207ENST00000487447 PIP4K2CQ8TBX8 421 aa11.85□□□□□ -0.51
CLIP2-207ENST00000487447 MAML1Q92585 1016 aa11.85□□□□□ -0.51
CLIP2-207ENST00000487447 HDAC11Q96DB2 347 aa11.85□□□□□ -0.51
CLIP2-207ENST00000487447 ERLEC1Q96DZ1 483 aa11.85□□□□□ -0.51
CLIP2-207ENST00000487447 ZNF419Q96HQ0 510 aaPredicted RBP11.85□□□□□ -0.51
CLIP2-207ENST00000487447 RBM41Q96IZ5 413 aaKnown RBP11.85□□□□□ -0.51
CLIP2-207ENST00000487447 GDAP1L1Q96MZ0 367 aa11.85□□□□□ -0.51
CLIP2-207ENST00000487447 OLFM3Q96PB7 478 aa11.85□□□□□ -0.51
CLIP2-207ENST00000487447 PSKH2Q96QS6 385 aa11.85□□□□□ -0.51
CLIP2-207ENST00000487447 TNKS2Q9H2K2 1166 aa11.85□□□□□ -0.51
CLIP2-207ENST00000487447 KCNF1Q9H3M0 494 aa11.85□□□□□ -0.51
CLIP2-207ENST00000487447 SP110Q9HB58 689 aa11.85□□□□□ -0.51
CLIP2-207ENST00000487447 DTLQ9NZJ0 730 aa11.85□□□□□ -0.51
CLIP2-207ENST00000487447 SERGEFQ9UGK8 458 aa11.85□□□□□ -0.51
CLIP2-207ENST00000487447 IL36AQ9UHA7 158 aa11.85□□□□□ -0.51
CLIP2-207ENST00000487447 EFR3BQ9Y2G0 817 aa11.85□□□□□ -0.51
CLIP2-207ENST00000487447 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.85□□□□□ -0.51
CLIP2-207ENST00000487447 PCDHGA5Q9Y5G8 931 aa11.85□□□□□ -0.51
CLIP2-207ENST00000487447 MACROD2A1Z1Q3 448 aa11.84□□□□□ -0.51
CLIP2-207ENST00000487447 RNF103O00237 685 aa11.84□□□□□ -0.51
CLIP2-207ENST00000487447 LRP3O75074 770 aa11.84□□□□□ -0.51
CLIP2-207ENST00000487447 PALMO75781 387 aa11.84□□□□□ -0.51
CLIP2-207ENST00000487447 ZRANB2O95218 330 aaKnown RBP eCLIP11.84□□□□□ -0.51
CLIP2-207ENST00000487447 IGSF6O95976 241 aa11.84□□□□□ -0.51
CLIP2-207ENST00000487447 IL1BP01584 269 aa11.84□□□□□ -0.51
CLIP2-207ENST00000487447 RETP07949 1114 aa11.84□□□□□ -0.51
CLIP2-207ENST00000487447 ZFXP17010 805 aaPredicted RBP11.84□□□□□ -0.51
CLIP2-207ENST00000487447 CR2P20023 1033 aa11.84□□□□□ -0.51
CLIP2-207ENST00000487447 RECQLP46063 649 aaPredicted RBP11.84□□□□□ -0.51
CLIP2-207ENST00000487447 PSMD8P48556 350 aa11.84□□□□□ -0.51
CLIP2-207ENST00000487447 METAP1P53582 386 aa11.84□□□□□ -0.51
CLIP2-207ENST00000487447 NSUN2Q08J23 767 aaKnown RBP eCLIP11.84□□□□□ -0.51
CLIP2-207ENST00000487447 SLC10A2Q12908 348 aaPredicted RBP11.84□□□□□ -0.51
CLIP2-207ENST00000487447 ELF2Q15723 593 aa11.84□□□□□ -0.51
CLIP2-207ENST00000487447 TFDP3Q5H9I0 405 aa11.84□□□□□ -0.51
CLIP2-207ENST00000487447 AGBL4Q5VU57 503 aa11.84□□□□□ -0.51
CLIP2-207ENST00000487447 LEKR1Q6ZMV7 388 aa11.84□□□□□ -0.51
CLIP2-207ENST00000487447 CEP68Q76N32 757 aa11.84□□□□□ -0.51
CLIP2-207ENST00000487447 ATPAF2Q8N5M1 289 aa11.84□□□□□ -0.51
CLIP2-207ENST00000487447 SPOCK2Q92563 424 aa11.84□□□□□ -0.51
CLIP2-207ENST00000487447 ALG3Q92685 438 aa11.84□□□□□ -0.51
CLIP2-207ENST00000487447 RNF25Q96BH1 459 aaPredicted RBP11.84□□□□□ -0.51
CLIP2-207ENST00000487447 TOE1Q96GM8 510 aaKnown RBP11.84□□□□□ -0.51
CLIP2-207ENST00000487447 HES6Q96HZ4 224 aa11.84□□□□□ -0.51
CLIP2-207ENST00000487447 HEPHQ9BQS7 1158 aa11.84□□□□□ -0.51
CLIP2-207ENST00000487447 OSBPL1AQ9BXW6 950 aa11.84□□□□□ -0.51
CLIP2-207ENST00000487447 CPEB1Q9BZB8 566 aaKnown RBP11.84□□□□□ -0.51
CLIP2-207ENST00000487447 TM6SF2Q9BZW4 377 aa11.84□□□□□ -0.51
CLIP2-207ENST00000487447 KDM4CQ9H3R0 1056 aa11.84□□□□□ -0.51
CLIP2-207ENST00000487447 SGK2Q9HBY8 427 aa11.84□□□□□ -0.51
CLIP2-207ENST00000487447 DLL3Q9NYJ7 618 aa11.84□□□□□ -0.51
CLIP2-207ENST00000487447 AMACRQ9UHK6 382 aa11.84□□□□□ -0.51
CLIP2-207ENST00000487447 INVSQ9Y283 1065 aa11.84□□□□□ -0.51
CLIP2-207ENST00000487447 FARP1Q9Y4F1 1045 aaPredicted RBP11.84□□□□□ -0.51
CLIP2-207ENST00000487447 FRYLO94915 3013 aa11.84□□□□□ -0.51
CLIP2-207ENST00000487447 NCOR2Q9Y618 2525 aa11.84□□□□□ -0.51
CLIP2-207ENST00000487447 A0A1W2PP55 124 aa11.83□□□□□ -0.52
CLIP2-207ENST00000487447 TSPAN11A1L157 253 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms