RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 CELA2BP08218 269 aaPredicted RBP11.95□□□□□ -0.5
TRIM56-204ENST00000487252 PNLIPP16233 465 aa11.95□□□□□ -0.5
TRIM56-204ENST00000487252 HOXD13P35453 343 aa11.95□□□□□ -0.5
TRIM56-204ENST00000487252 NNMTP40261 264 aa11.95□□□□□ -0.5
TRIM56-204ENST00000487252 ASPAP45381 313 aa11.95□□□□□ -0.5
TRIM56-204ENST00000487252 SLC11A2P49281 568 aa11.95□□□□□ -0.5
TRIM56-204ENST00000487252 MCEMP1Q8IX19 187 aa11.95□□□□□ -0.5
TRIM56-204ENST00000487252 PHACTR4Q8IZ21 702 aa11.95□□□□□ -0.5
TRIM56-204ENST00000487252 CARNMT1Q8N4J0 409 aa11.95□□□□□ -0.5
TRIM56-204ENST00000487252 FAM184AQ8NB25 1140 aa11.95□□□□□ -0.5
TRIM56-204ENST00000487252 NANOS1Q8WY41 292 aaKnown RBP11.95□□□□□ -0.5
TRIM56-204ENST00000487252 DDA1Q9BW61 102 aa11.95□□□□□ -0.5
TRIM56-204ENST00000487252 SEMA6CQ9H3T2 930 aa11.95□□□□□ -0.5
TRIM56-204ENST00000487252 GULP1Q9UBP9 304 aa11.95□□□□□ -0.5
TRIM56-204ENST00000487252 IPO11Q9UI26 975 aaKnown RBP11.95□□□□□ -0.5
TRIM56-204ENST00000487252 PILRAQ9UKJ1 303 aa11.95□□□□□ -0.5
TRIM56-204ENST00000487252 PHTF1Q9UMS5 762 aa11.95□□□□□ -0.5
TRIM56-204ENST00000487252 SLC5A6Q9Y289 635 aa11.95□□□□□ -0.5
TRIM56-204ENST00000487252 B3GALT1Q9Y5Z6 326 aa11.95□□□□□ -0.5
TRIM56-204ENST00000487252 ARHGAP10A1A4S6 786 aa11.94□□□□□ -0.5
TRIM56-204ENST00000487252 PAK4O96013 591 aaPredicted RBP11.94□□□□□ -0.5
TRIM56-204ENST00000487252 PLK1P53350 603 aa11.94□□□□□ -0.5
TRIM56-204ENST00000487252 CLDN10P78369 228 aa11.94□□□□□ -0.5
TRIM56-204ENST00000487252 SULT2A1Q06520 285 aa11.94□□□□□ -0.5
TRIM56-204ENST00000487252 CCDC15Q0P6D6 951 aa11.94□□□□□ -0.5
TRIM56-204ENST00000487252 NCOA4Q13772 614 aa11.94□□□□□ -0.5
TRIM56-204ENST00000487252 RILPL1Q5EBL4 403 aa11.94□□□□□ -0.5
TRIM56-204ENST00000487252 SPRED1Q7Z699 444 aa11.94□□□□□ -0.5
TRIM56-204ENST00000487252 GPR156Q8NFN8 814 aa11.94□□□□□ -0.5
TRIM56-204ENST00000487252 PCDH19Q8TAB3 1148 aa11.94□□□□□ -0.5
TRIM56-204ENST00000487252 C5orf34Q96MH7 638 aa11.94□□□□□ -0.5
TRIM56-204ENST00000487252 HAPLN3Q96S86 360 aa11.94□□□□□ -0.5
TRIM56-204ENST00000487252 EFHD1Q9BUP0 239 aa11.94□□□□□ -0.5
TRIM56-204ENST00000487252 GPN2Q9H9Y4 310 aaPredicted RBP11.94□□□□□ -0.5
TRIM56-204ENST00000487252 CYP4F12Q9HCS2 524 aa11.94□□□□□ -0.5
TRIM56-204ENST00000487252 RRAGDQ9NQL2 400 aaPredicted RBP11.94□□□□□ -0.5
TRIM56-204ENST00000487252 CEP83Q9Y592 693 aa11.94□□□□□ -0.5
TRIM56-204ENST00000487252 CROCCQ5TZA2 2017 aa11.94□□□□□ -0.5
TRIM56-204ENST00000487252 RNF103O00237 685 aa11.93□□□□□ -0.5
TRIM56-204ENST00000487252 FPGTO14772 594 aa11.93□□□□□ -0.5
TRIM56-204ENST00000487252 PCDH8O95206 1070 aa11.93□□□□□ -0.5
TRIM56-204ENST00000487252 ZBED1O96006 694 aa11.93□□□□□ -0.5
TRIM56-204ENST00000487252 C4BPAP04003 597 aaKnown RBP11.93□□□□□ -0.5
TRIM56-204ENST00000487252 P4HA1P13674 534 aa11.93□□□□□ -0.5
TRIM56-204ENST00000487252 GLB1P16278 677 aa11.93□□□□□ -0.5
TRIM56-204ENST00000487252 RPS21P63220 83 aaKnown RBP11.93□□□□□ -0.5
TRIM56-204ENST00000487252 MC1RQ01726 317 aa11.93□□□□□ -0.5
TRIM56-204ENST00000487252 SLC12A1Q13621 1099 aa11.93□□□□□ -0.5
TRIM56-204ENST00000487252 ARHGAP44Q17R89 818 aa11.93□□□□□ -0.5
TRIM56-204ENST00000487252 DCAF6Q58WW2 860 aa11.93□□□□□ -0.5
TRIM56-204ENST00000487252 MS4A13Q5J8X5 152 aa11.93□□□□□ -0.5
TRIM56-204ENST00000487252 CERCAMQ5T4B2 595 aa11.93□□□□□ -0.5
TRIM56-204ENST00000487252 PHF19Q5T6S3 580 aa11.93□□□□□ -0.5
TRIM56-204ENST00000487252 PPP1R26Q5T8A7 1209 aaPredicted RBP11.93□□□□□ -0.5
TRIM56-204ENST00000487252 ATP1A1-AS1Q5TC04 95 aa11.93□□□□□ -0.5
TRIM56-204ENST00000487252 KIAA1161Q6NSJ0 714 aa11.93□□□□□ -0.5
TRIM56-204ENST00000487252 MSANTD2Q6P1R3 559 aa11.93□□□□□ -0.5
TRIM56-204ENST00000487252 FAM173BQ6P4H8 233 aa11.93□□□□□ -0.5
TRIM56-204ENST00000487252 PIGZQ86VD9 579 aa11.93□□□□□ -0.5
TRIM56-204ENST00000487252 UNC45BQ8IWX7 931 aa11.93□□□□□ -0.5
TRIM56-204ENST00000487252 MMP21Q8N119 569 aa11.93□□□□□ -0.5
TRIM56-204ENST00000487252 FSTL5Q8N475 847 aaPredicted RBP11.93□□□□□ -0.5
TRIM56-204ENST00000487252 NDRG1Q92597 394 aaKnown RBP11.93□□□□□ -0.5
TRIM56-204ENST00000487252 ANP32BQ92688 251 aaKnown RBP11.93□□□□□ -0.5
TRIM56-204ENST00000487252 ERCC4Q92889 916 aaPredicted RBP11.93□□□□□ -0.5
TRIM56-204ENST00000487252 LURAP1Q96LR2 239 aa11.93□□□□□ -0.5
TRIM56-204ENST00000487252 HDAC8Q9BY41 377 aa11.93□□□□□ -0.5
TRIM56-204ENST00000487252 SLC13A1Q9BZW2 595 aa11.93□□□□□ -0.5
TRIM56-204ENST00000487252 PLSCR2Q9NRY7 297 aa11.93□□□□□ -0.5
TRIM56-204ENST00000487252 RCOR1Q9UKL0 485 aa11.93□□□□□ -0.5
TRIM56-204ENST00000487252 POLEQ07864 2286 aa11.93□□□□□ -0.5
TRIM56-204ENST00000487252 TNRC6AQ8NDV7 1962 aaKnown RBP11.92□□□□□ -0.5
TRIM56-204ENST00000487252 LRP4O75096 1905 aa11.92□□□□□ -0.5
TRIM56-204ENST00000487252 LOC101059948A0A1B0GTJ6 334 aa11.92□□□□□ -0.5
TRIM56-204ENST00000487252 H3BQV1 296 aa11.92□□□□□ -0.5
TRIM56-204ENST00000487252 DIAPH2O60879 1101 aa11.92□□□□□ -0.5
TRIM56-204ENST00000487252 PHACTR2O75167 634 aa11.92□□□□□ -0.5
TRIM56-204ENST00000487252 LEPRP48357 1165 aaKnown RBP11.92□□□□□ -0.5
TRIM56-204ENST00000487252 TKTL1P51854 596 aa11.92□□□□□ -0.5
TRIM56-204ENST00000487252 PTK2BQ14289 1009 aa11.92□□□□□ -0.5
TRIM56-204ENST00000487252 INPP5JQ15735 1006 aaPredicted RBP11.92□□□□□ -0.5
TRIM56-204ENST00000487252 BSPRYQ5W0U4 402 aa11.92□□□□□ -0.5
TRIM56-204ENST00000487252 RBM43Q6ZSC3 357 aaKnown RBP11.92□□□□□ -0.5
TRIM56-204ENST00000487252 Q6ZVU0 165 aa11.92□□□□□ -0.5
TRIM56-204ENST00000487252 ERN2Q76MJ5 926 aaKnown RBP11.92□□□□□ -0.5
TRIM56-204ENST00000487252 XYLT1Q86Y38 959 aa11.92□□□□□ -0.5
TRIM56-204ENST00000487252 CFAP52Q8N1V2 620 aa11.92□□□□□ -0.5
TRIM56-204ENST00000487252 TMIEQ8NEW7 156 aa11.92□□□□□ -0.5
TRIM56-204ENST00000487252 PLEKHO2Q8TD55 490 aa11.92□□□□□ -0.5
TRIM56-204ENST00000487252 SCG3Q8WXD2 468 aaKnown RBP11.92□□□□□ -0.5
TRIM56-204ENST00000487252 ASB12Q8WXK4 309 aa11.92□□□□□ -0.5
TRIM56-204ENST00000487252 STARD8Q92502 1023 aa11.92□□□□□ -0.5
TRIM56-204ENST00000487252 EDEM1Q92611 657 aa11.92□□□□□ -0.5
TRIM56-204ENST00000487252 SPATA32Q96LK8 384 aa11.92□□□□□ -0.5
TRIM56-204ENST00000487252 NT5C1AQ9BXI3 368 aa11.92□□□□□ -0.5
TRIM56-204ENST00000487252 C1QTNF2Q9BXJ5 285 aa11.92□□□□□ -0.5
TRIM56-204ENST00000487252 ULBP1Q9BZM6 244 aa11.92□□□□□ -0.5
TRIM56-204ENST00000487252 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.92□□□□□ -0.55e-7■■□□□ 11.9
TRIM56-204ENST00000487252 AKAP7Q9P0M2 348 aaPredicted RBP11.92□□□□□ -0.5
TRIM56-204ENST00000487252 SIRPGQ9P1W8 387 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms