RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 C1QTNF1Q9BXJ1 281 aa26.49■■□□□ 1.83
HLA-C-208ENST00000487245 RHOJQ9H4E5 214 aa26.49■■□□□ 1.83
HLA-C-208ENST00000487245 IARS2Q9NSE4 1012 aaKnown RBP26.49■■□□□ 1.83
HLA-C-208ENST00000487245 ZDHHC7Q9NXF8 308 aa26.49■■□□□ 1.83
HLA-C-208ENST00000487245 PALM2-AKAP2B1ALY0 433 aaPredicted RBP26.48■■□□□ 1.83
HLA-C-208ENST00000487245 SLC22A2O15244 555 aa26.48■■□□□ 1.83
HLA-C-208ENST00000487245 COL6A2P12110 1019 aa26.48■■□□□ 1.83
HLA-C-208ENST00000487245 TPH1P17752 444 aa26.48■■□□□ 1.83
HLA-C-208ENST00000487245 TRIM32Q13049 653 aa26.48■■□□□ 1.83
HLA-C-208ENST00000487245 KLF10Q13118 480 aa26.48■■□□□ 1.83
HLA-C-208ENST00000487245 HNRNPDQ14103 355 aaKnown RBP26.48■■□□□ 1.83
HLA-C-208ENST00000487245 SMAD1Q15797 465 aaKnown RBP26.48■■□□□ 1.83
HLA-C-208ENST00000487245 RALGPS1Q5JS13 557 aa26.48■■□□□ 1.83
HLA-C-208ENST00000487245 CFAP157Q5JU67 520 aa26.48■■□□□ 1.83
HLA-C-208ENST00000487245 ARMC3Q5W041 872 aa26.48■■□□□ 1.83
HLA-C-208ENST00000487245 PKN3Q6P5Z2 889 aa26.48■■□□□ 1.83
HLA-C-208ENST00000487245 SCD5Q86SK9 330 aa26.48■■□□□ 1.83
HLA-C-208ENST00000487245 SERPINB11Q96P15 392 aa26.48■■□□□ 1.83
HLA-C-208ENST00000487245 CAB39LQ9H9S4 337 aa26.48■■□□□ 1.83
HLA-C-208ENST00000487245 RGS18Q9NS28 235 aa26.48■■□□□ 1.83
HLA-C-208ENST00000487245 ARHGAP26Q9UNA1 814 aa26.48■■□□□ 1.83
HLA-C-208ENST00000487245 RAP2CQ9Y3L5 183 aa26.48■■□□□ 1.83
HLA-C-208ENST00000487245 TMEM189-UBE2V1I3L0A0 370 aa26.47■■□□□ 1.83
HLA-C-208ENST00000487245 MAFKO60675 156 aa26.47■■□□□ 1.83
HLA-C-208ENST00000487245 MYCNP04198 464 aaPredicted RBP26.47■■□□□ 1.83
HLA-C-208ENST00000487245 ITGB1P05556 798 aa26.47■■□□□ 1.83
HLA-C-208ENST00000487245 NCF2P19878 526 aaPredicted RBP26.47■■□□□ 1.83
HLA-C-208ENST00000487245 NMBRP28336 390 aa26.47■■□□□ 1.83
HLA-C-208ENST00000487245 ITGA7Q13683 1181 aa26.47■■□□□ 1.83
HLA-C-208ENST00000487245 CCNIQ14094 377 aa26.47■■□□□ 1.83
HLA-C-208ENST00000487245 UGP2Q16851 508 aa26.47■■□□□ 1.83
HLA-C-208ENST00000487245 TDRD5Q8NAT2 981 aaKnown RBP26.47■■□□□ 1.83
HLA-C-208ENST00000487245 USP33Q8TEY7 942 aa26.47■■□□□ 1.83
HLA-C-208ENST00000487245 CASP10Q92851 521 aa26.47■■□□□ 1.83
HLA-C-208ENST00000487245 IFT43Q96FT9 208 aa26.47■■□□□ 1.83
HLA-C-208ENST00000487245 ATXN7L3BQ96GX2 97 aa26.47■■□□□ 1.83
HLA-C-208ENST00000487245 CNDP1Q96KN2 507 aa26.47■■□□□ 1.83
HLA-C-208ENST00000487245 SLC39A8Q9C0K1 460 aa26.47■■□□□ 1.83
HLA-C-208ENST00000487245 DRC3Q9H069 523 aa26.47■■□□□ 1.83
HLA-C-208ENST00000487245 ILKAPQ9H0C8 392 aaPredicted RBP26.47■■□□□ 1.83
HLA-C-208ENST00000487245 UBP1Q9NZI7 540 aa26.47■■□□□ 1.83
HLA-C-208ENST00000487245 ASB3Q9Y575 518 aa26.47■■□□□ 1.83
HLA-C-208ENST00000487245 EIF4E1BA6NMX2 242 aaKnown RBP26.47■■□□□ 1.83
HLA-C-208ENST00000487245 WASH4PA8MWX3 477 aa26.47■■□□□ 1.83
HLA-C-208ENST00000487245 XIAPP98170 497 aa26.47■■□□□ 1.83
HLA-C-208ENST00000487245 USP4Q13107 963 aa26.47■■□□□ 1.83
HLA-C-208ENST00000487245 DLG2Q15700 870 aa26.47■■□□□ 1.83
HLA-C-208ENST00000487245 AFMIDQ63HM1 303 aa26.47■■□□□ 1.83
HLA-C-208ENST00000487245 DHDDSQ86SQ9 333 aa26.47■■□□□ 1.83
HLA-C-208ENST00000487245 ZC3HC1Q86WB0 502 aaKnown RBP26.47■■□□□ 1.83
HLA-C-208ENST00000487245 CNTN4Q8IWV2 1026 aa26.47■■□□□ 1.83
HLA-C-208ENST00000487245 ARHGAP18Q8N392 663 aa26.47■■□□□ 1.83
HLA-C-208ENST00000487245 PHTF2Q8N3S3 785 aa26.47■■□□□ 1.83
HLA-C-208ENST00000487245 TMEM151AQ8N4L1 468 aa26.47■■□□□ 1.83
HLA-C-208ENST00000487245 C1orf74Q96LT6 269 aa26.47■■□□□ 1.83
HLA-C-208ENST00000487245 TTC1Q99614 292 aa26.47■■□□□ 1.83
HLA-C-208ENST00000487245 OXCT2Q9BYC2 517 aaPredicted RBP26.47■■□□□ 1.83
HLA-C-208ENST00000487245 ZCWPW1Q9H0M4 648 aa26.47■■□□□ 1.83
HLA-C-208ENST00000487245 MRM3Q9HC36 420 aaKnown RBP26.47■■□□□ 1.83
HLA-C-208ENST00000487245 ENTPD7Q9NQZ7 604 aa26.47■■□□□ 1.83
HLA-C-208ENST00000487245 DLGAP2Q9P1A6 1054 aa26.47■■□□□ 1.83
HLA-C-208ENST00000487245 SFMBT1Q9UHJ3 866 aa26.47■■□□□ 1.83
HLA-C-208ENST00000487245 E2F8A0AVK6 867 aa26.46■■□□□ 1.83
HLA-C-208ENST00000487245 KCNU1A8MYU2 1149 aa26.46■■□□□ 1.83
HLA-C-208ENST00000487245 MATN2O00339 956 aa26.46■■□□□ 1.83
HLA-C-208ENST00000487245 ZBTB14O43829 449 aa26.46■■□□□ 1.83
HLA-C-208ENST00000487245 OAZ2O95190 189 aa26.46■■□□□ 1.83
HLA-C-208ENST00000487245 SLC2A3P11169 496 aa26.46■■□□□ 1.83
HLA-C-208ENST00000487245 PRKCZQ05513 592 aa26.46■■□□□ 1.83
HLA-C-208ENST00000487245 SLC9B1Q4ZJI4 515 aa26.46■■□□□ 1.83
HLA-C-208ENST00000487245 LIPMQ5VYY2 423 aa26.46■■□□□ 1.83
HLA-C-208ENST00000487245 POTEHQ6S545 545 aa26.46■■□□□ 1.83
HLA-C-208ENST00000487245 IZUMO2Q6UXV1 221 aa26.46■■□□□ 1.83
HLA-C-208ENST00000487245 FUBP3Q96I24 572 aaKnown RBP eCLIP26.46■■□□□ 1.83
HLA-C-208ENST00000487245 CCDC28BQ9BUN5 200 aa26.46■■□□□ 1.83
HLA-C-208ENST00000487245 ACE2Q9BYF1 805 aaPredicted RBP26.46■■□□□ 1.83
HLA-C-208ENST00000487245 SCML2Q9UQR0 700 aa26.46■■□□□ 1.83
HLA-C-208ENST00000487245 CCND3P30281 292 aaPredicted RBP26.45■■□□□ 1.83
HLA-C-208ENST00000487245 GRM3Q14832 879 aa26.45■■□□□ 1.83
HLA-C-208ENST00000487245 NFE2Q16621 373 aaPredicted RBP26.45■■□□□ 1.83
HLA-C-208ENST00000487245 ARHGAP36Q6ZRI8 547 aa26.45■■□□□ 1.83
HLA-C-208ENST00000487245 FRMD7Q6ZUT3 714 aa26.45■■□□□ 1.83
HLA-C-208ENST00000487245 MON1AQ86VX9 555 aa26.45■■□□□ 1.83
HLA-C-208ENST00000487245 FBXW8Q8N3Y1 598 aa26.45■■□□□ 1.83
HLA-C-208ENST00000487245 RTL3Q8N8U3 475 aaKnown RBP26.45■■□□□ 1.83
HLA-C-208ENST00000487245 PPHLN1Q8NEY8 458 aaKnown RBP26.45■■□□□ 1.83
HLA-C-208ENST00000487245 TSNARE1Q96NA8 513 aa26.45■■□□□ 1.83
HLA-C-208ENST00000487245 VCX3BQ9H321 246 aa26.45■■□□□ 1.83
HLA-C-208ENST00000487245 TLK1Q9UKI8 766 aa26.45■■□□□ 1.83
HLA-C-208ENST00000487245 TLL2Q9Y6L7 1015 aa26.45■■□□□ 1.83
HLA-C-208ENST00000487245 DCXO43602 365 aa26.45■■□□□ 1.82
HLA-C-208ENST00000487245 BAG2O95816 211 aa26.45■■□□□ 1.82
HLA-C-208ENST00000487245 ADSLP30566 484 aaPredicted RBP26.45■■□□□ 1.82
HLA-C-208ENST00000487245 CDC16Q13042 620 aa26.45■■□□□ 1.82
HLA-C-208ENST00000487245 SLC39A12Q504Y0 691 aa26.45■■□□□ 1.82
HLA-C-208ENST00000487245 MSANTD2Q6P1R3 559 aa26.45■■□□□ 1.82
HLA-C-208ENST00000487245 SCN4BQ8IWT1 228 aa26.45■■□□□ 1.82
HLA-C-208ENST00000487245 SLC25A41Q8N5S1 370 aa26.45■■□□□ 1.82
HLA-C-208ENST00000487245 MAPK15Q8TD08 544 aa26.45■■□□□ 1.82
HLA-C-208ENST00000487245 PPP2R3CQ969Q6 453 aa26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms