RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 CHP1Q99653 195 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 SNRNP25Q9BV90 132 aaKnown RBP7.32□□□□□ -1.24
UBE4B-209ENST00000487244 C2orf49Q9BVC5 232 aaPredicted RBP7.32□□□□□ -1.24
UBE4B-209ENST00000487244 NUP85Q9BW27 656 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 KLC2Q9H0B6 622 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 TNKS2Q9H2K2 1166 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 C6orf106Q9H6K1 298 aaPredicted RBP7.32□□□□□ -1.24
UBE4B-209ENST00000487244 FBRSQ9HAH7 460 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 ATP13A1Q9HD20 1204 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 ABHD10Q9NUJ1 306 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 SPTLC3Q9NUV7 552 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 TMEM51Q9NW97 253 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 TMEM248Q9NWD8 314 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 SUN2Q9UH99 717 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 SLC25A13Q9UJS0 675 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 PILRBQ9UKJ0 227 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 AP4E1Q9UPM8 1137 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 HS3ST2Q9Y278 367 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 MFHAS1Q9Y4C4 1052 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 BZW2Q9Y6E2 419 aaKnown RBP7.32□□□□□ -1.24
UBE4B-209ENST00000487244 SCINQ9Y6U3 715 aa7.32□□□□□ -1.24
UBE4B-209ENST00000487244 TARSL2A2RTX5 802 aaKnown RBP7.31□□□□□ -1.24
UBE4B-209ENST00000487244 MEI4A8MW99 385 aa7.31□□□□□ -1.24
UBE4B-209ENST00000487244 ZNF821O75541 412 aaPredicted RBP7.31□□□□□ -1.24
UBE4B-209ENST00000487244 RNASEH2AO75792 299 aaKnown RBP7.31□□□□□ -1.24
UBE4B-209ENST00000487244 IL1BP01584 269 aa7.31□□□□□ -1.24
UBE4B-209ENST00000487244 DNTTP04053 509 aa7.31□□□□□ -1.24
UBE4B-209ENST00000487244 CYP1A2P05177 515 aa7.31□□□□□ -1.24
UBE4B-209ENST00000487244 MYBL1P10243 752 aa7.31□□□□□ -1.24
UBE4B-209ENST00000487244 GOT1P17174 413 aa7.31□□□□□ -1.24
UBE4B-209ENST00000487244 SLC8A1P32418 973 aa7.31□□□□□ -1.24
UBE4B-209ENST00000487244 ID4P47928 161 aa7.31□□□□□ -1.24
UBE4B-209ENST00000487244 MAPKAPK2P49137 400 aa7.31□□□□□ -1.24
UBE4B-209ENST00000487244 SERPINH1P50454 418 aaKnown RBP7.31□□□□□ -1.24
UBE4B-209ENST00000487244 RNF144AP50876 292 aaPredicted RBP7.31□□□□□ -1.24
UBE4B-209ENST00000487244 TPI1P60174 286 aa7.31□□□□□ -1.24
UBE4B-209ENST00000487244 KRT83P78385 493 aa7.31□□□□□ -1.24
UBE4B-209ENST00000487244 TRIM14Q14142 442 aa7.31□□□□□ -1.24
UBE4B-209ENST00000487244 LRRK1Q38SD2 2015 aa7.31□□□□□ -1.24
UBE4B-209ENST00000487244 TTC31Q49AM3 519 aaPredicted RBP7.31□□□□□ -1.24
UBE4B-209ENST00000487244 TRIM61Q5EBN2 209 aa7.31□□□□□ -1.24
UBE4B-209ENST00000487244 KCNT1Q5JUK3 1230 aa7.31□□□□□ -1.24
UBE4B-209ENST00000487244 SPDYCQ5MJ68 293 aa7.31□□□□□ -1.24
UBE4B-209ENST00000487244 CCDC122Q5T0U0 273 aa7.31□□□□□ -1.24
UBE4B-209ENST00000487244 ACBD5Q5T8D3 534 aaPredicted RBP7.31□□□□□ -1.24
UBE4B-209ENST00000487244 DCAF12L1Q5VU92 463 aa7.31□□□□□ -1.24
UBE4B-209ENST00000487244 IL31Q6EBC2 164 aa7.31□□□□□ -1.24
UBE4B-209ENST00000487244 SARM1Q6SZW1 724 aa7.31□□□□□ -1.24
UBE4B-209ENST00000487244 LAYNQ6UX15 382 aa7.31□□□□□ -1.24
UBE4B-209ENST00000487244 ZNF783Q6ZMS7 281 aa7.31□□□□□ -1.24
UBE4B-209ENST00000487244 VPS36Q86VN1 386 aa7.31□□□□□ -1.24
UBE4B-209ENST00000487244 SYT12Q8IV01 421 aa7.31□□□□□ -1.24
UBE4B-209ENST00000487244 ZCCHC9Q8N567 271 aaKnown RBP7.31□□□□□ -1.24
UBE4B-209ENST00000487244 GPR161Q8N6U8 529 aaKnown RBP7.31□□□□□ -1.24
UBE4B-209ENST00000487244 NPWQ8N729 165 aa7.31□□□□□ -1.24
UBE4B-209ENST00000487244 RTL3Q8N8U3 475 aaKnown RBP7.31□□□□□ -1.24
UBE4B-209ENST00000487244 C12orf50Q8NA57 414 aaPredicted RBP7.31□□□□□ -1.24
UBE4B-209ENST00000487244 CHST14Q8NCH0 376 aa7.31□□□□□ -1.24
UBE4B-209ENST00000487244 OR8K1Q8NGG5 319 aa7.31□□□□□ -1.24
UBE4B-209ENST00000487244 OR2A12Q8NGT7 310 aa7.31□□□□□ -1.24
UBE4B-209ENST00000487244 GRIN3AQ8TCU5 1115 aa7.31□□□□□ -1.24
UBE4B-209ENST00000487244 GANCQ8TET4 914 aa7.31□□□□□ -1.24
UBE4B-209ENST00000487244 FNIP1Q8TF40 1166 aa7.31□□□□□ -1.24
UBE4B-209ENST00000487244 SNX19Q92543 992 aa7.31□□□□□ -1.24
UBE4B-209ENST00000487244 HMCESQ96FZ2 354 aa7.31□□□□□ -1.24
UBE4B-209ENST00000487244 ZNF419Q96HQ0 510 aaPredicted RBP7.31□□□□□ -1.24
UBE4B-209ENST00000487244 EDEM2Q9BV94 578 aa7.31□□□□□ -1.24
UBE4B-209ENST00000487244 TRPM6Q9BX84 2022 aa7.31□□□□□ -1.24
UBE4B-209ENST00000487244 ACE2Q9BYF1 805 aaPredicted RBP7.31□□□□□ -1.24
UBE4B-209ENST00000487244 TRIM5Q9C035 493 aa7.31□□□□□ -1.24
UBE4B-209ENST00000487244 NEUROG2Q9H2A3 272 aa7.31□□□□□ -1.24
UBE4B-209ENST00000487244 ALG2Q9H553 416 aa7.31□□□□□ -1.24
UBE4B-209ENST00000487244 DHX35Q9H5Z1 703 aaKnown RBP7.31□□□□□ -1.24
UBE4B-209ENST00000487244 FBXL12Q9NXK8 326 aa7.31□□□□□ -1.24
UBE4B-209ENST00000487244 DLL3Q9NYJ7 618 aa7.31□□□□□ -1.24
UBE4B-209ENST00000487244 ANAPC7Q9UJX3 599 aa7.31□□□□□ -1.24
UBE4B-209ENST00000487244 PCNX2A6NKB5 2137 aa7.3□□□□□ -1.24
UBE4B-209ENST00000487244 DCDC2BA2VCK2 349 aa7.3□□□□□ -1.24
UBE4B-209ENST00000487244 FAM47DPA6NHR8 397 aa7.3□□□□□ -1.24
UBE4B-209ENST00000487244 METTL12A8MUP2 240 aa7.3□□□□□ -1.24
UBE4B-209ENST00000487244 EEF2KO00418 725 aaKnown RBP7.3□□□□□ -1.24
UBE4B-209ENST00000487244 CDX4O14627 284 aaPredicted RBP7.3□□□□□ -1.24
UBE4B-209ENST00000487244 KHNYNO15037 678 aaKnown RBP7.3□□□□□ -1.24
UBE4B-209ENST00000487244 MCF2LO15068 1137 aa7.3□□□□□ -1.24
UBE4B-209ENST00000487244 PRPSAP2O60256 369 aa7.3□□□□□ -1.24
UBE4B-209ENST00000487244 RAMP2O60895 175 aa7.3□□□□□ -1.24
UBE4B-209ENST00000487244 RNASEH1O60930 286 aaKnown RBP7.3□□□□□ -1.24
UBE4B-209ENST00000487244 RNF8O76064 485 aa7.3□□□□□ -1.24
UBE4B-209ENST00000487244 FSBPO95073 299 aa7.3□□□□□ -1.24
UBE4B-209ENST00000487244 SEMA4FO95754 770 aa7.3□□□□□ -1.24
UBE4B-209ENST00000487244 IGHV4-34P06331 123 aa7.3□□□□□ -1.24
UBE4B-209ENST00000487244 OXTRP30559 389 aa7.3□□□□□ -1.24
UBE4B-209ENST00000487244 GKP32189 559 aa7.3□□□□□ -1.24
UBE4B-209ENST00000487244 GPC1P35052 558 aa7.3□□□□□ -1.24
UBE4B-209ENST00000487244 NNMTP40261 264 aa7.3□□□□□ -1.24
UBE4B-209ENST00000487244 MAPK8P45983 427 aa7.3□□□□□ -1.24
UBE4B-209ENST00000487244 ADPRHP54922 357 aa7.3□□□□□ -1.24
UBE4B-209ENST00000487244 AIF1P55008 147 aa7.3□□□□□ -1.24
UBE4B-209ENST00000487244 PPP2CBP62714 309 aa7.3□□□□□ -1.24
UBE4B-209ENST00000487244 PPP2CAP67775 309 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms