RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 PPP1R42Q7Z4L9 355 aa5.64□□□□□ -1.51
COPS3-209ENST00000486810 SYTL1Q8IYJ3 562 aa5.64□□□□□ -1.51
COPS3-209ENST00000486810 SPICE1Q8N0Z3 855 aa5.64□□□□□ -1.51
COPS3-209ENST00000486810 IL31RAQ8NI17 732 aa5.64□□□□□ -1.51
COPS3-209ENST00000486810 CAGE1Q8TC20 777 aa5.64□□□□□ -1.51
COPS3-209ENST00000486810 BCAS4Q8TDM0 211 aa5.64□□□□□ -1.51
COPS3-209ENST00000486810 DDX17Q92841 729 aaKnown RBP5.64□□□□□ -1.51
COPS3-209ENST00000486810 MTFMTQ96DP5 389 aaKnown RBP5.64□□□□□ -1.51
COPS3-209ENST00000486810 HIC2Q96JB3 615 aa5.64□□□□□ -1.51
COPS3-209ENST00000486810 TNIP3Q96KP6 325 aa5.64□□□□□ -1.51
COPS3-209ENST00000486810 ART5Q96L15 291 aa5.64□□□□□ -1.51
COPS3-209ENST00000486810 NLRP4Q96MN2 994 aa5.64□□□□□ -1.51
COPS3-209ENST00000486810 ZNF570Q96NI8 536 aa5.64□□□□□ -1.51
COPS3-209ENST00000486810 SLC46A1Q96NT5 459 aa5.64□□□□□ -1.51
COPS3-209ENST00000486810 SIKE1Q9BRV8 207 aa5.64□□□□□ -1.51
COPS3-209ENST00000486810 SPATA5L1Q9BVQ7 753 aa5.64□□□□□ -1.51
COPS3-209ENST00000486810 TRIM54Q9BYV2 358 aa5.64□□□□□ -1.51
COPS3-209ENST00000486810 IFIH1Q9BYX4 1025 aaKnown RBP5.64□□□□□ -1.51
COPS3-209ENST00000486810 KRT23Q9C075 422 aa5.64□□□□□ -1.51
COPS3-209ENST00000486810 AMBRA1Q9C0C7 1298 aa5.64□□□□□ -1.51
COPS3-209ENST00000486810 ADNPQ9H2P0 1102 aa5.64□□□□□ -1.51
COPS3-209ENST00000486810 RAD21L1Q9H4I0 556 aa5.64□□□□□ -1.51
COPS3-209ENST00000486810 DENND2DQ9H6A0 471 aaPredicted RBP5.64□□□□□ -1.51
COPS3-209ENST00000486810 PDE11AQ9HCR9 933 aa5.64□□□□□ -1.51
COPS3-209ENST00000486810 C12orf4Q9NQ89 552 aa5.64□□□□□ -1.51
COPS3-209ENST00000486810 C1orf112Q9NSG2 853 aa5.64□□□□□ -1.51
COPS3-209ENST00000486810 RHBDL2Q9NX52 303 aa5.64□□□□□ -1.51
COPS3-209ENST00000486810 SLC7A8Q9UHI5 535 aa5.64□□□□□ -1.51
COPS3-209ENST00000486810 AGTPBP1Q9UPW5 1226 aa5.64□□□□□ -1.51
COPS3-209ENST00000486810 CLIP1P30622 1438 aa5.64□□□□□ -1.51
COPS3-209ENST00000486810 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 A0A0B4J269 797 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 A0A0J9YVX5 310 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 WDR27A2RRH5 827 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 SNTNA6NMZ2 147 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 SYCE1LA8MT33 242 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 E7ENQ6 273 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 K7ENM7 598 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 VWA5AO00534 786 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 KPNA5O15131 536 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 EIF3HO15372 352 aaKnown RBP eCLIP5.63□□□□□ -1.51
COPS3-209ENST00000486810 YY2O15391 372 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 ZBTB43O43298 467 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 SEC31AO94979 1220 aaKnown RBP5.63□□□□□ -1.51
COPS3-209ENST00000486810 ATP6V1G2O95670 118 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 DDX58O95786 925 aaKnown RBP5.63□□□□□ -1.51
COPS3-209ENST00000486810 ELFN1P0C7U0 828 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 GHRP10912 638 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 HPGDP15428 266 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 CALB2P22676 271 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 PBLDP30039 288 aaPredicted RBP5.63□□□□□ -1.51
COPS3-209ENST00000486810 PPP2R1AP30153 589 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 HOXA6P31267 233 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 FOLR3P41439 243 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 HSPA13P48723 471 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 CYP4F2P78329 520 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 SIM1P81133 766 aaPredicted RBP5.63□□□□□ -1.51
COPS3-209ENST00000486810 MYO1EQ12965 1108 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 TUBB3Q13509 450 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 CNN3Q15417 329 aaKnown RBP5.63□□□□□ -1.51
COPS3-209ENST00000486810 CNGA2Q16280 664 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 ACCSLQ4AC99 568 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 SETMARQ53H47 684 aaPredicted RBP5.63□□□□□ -1.51
COPS3-209ENST00000486810 AADACL4Q5VUY2 407 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 SPECC1LQ69YQ0 1117 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 C12orf56Q8IXR9 622 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 ZNF565Q8N9K5 539 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 KCNH5Q8NCM2 988 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.63□□□□□ -1.51
COPS3-209ENST00000486810 ANKS1AQ92625 1134 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 HAUS1Q96CS2 278 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 HDAC11Q96DB2 347 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 PGBD1Q96JS3 809 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 CNDP2Q96KP4 475 aaKnown RBP5.63□□□□□ -1.51
COPS3-209ENST00000486810 ATP6V1G3Q96LB4 118 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 JAKMIP1Q96N16 626 aaKnown RBP5.63□□□□□ -1.51
COPS3-209ENST00000486810 CDRT15Q96T59 188 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 DHRS9Q9BPW9 319 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 HEPHQ9BQS7 1158 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 DESI2Q9BSY9 194 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 DPH1Q9BZG8 443 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 EDEM3Q9BZQ6 932 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 SIK2Q9H0K1 926 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 EHD1Q9H4M9 534 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 MROH8Q9H579 483 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 SLC38A10Q9HBR0 1119 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 NOD2Q9HC29 1040 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 TRPC7Q9HCX4 862 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 CNGB3Q9NQW8 809 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 IARS2Q9NSE4 1012 aaKnown RBP5.63□□□□□ -1.51
COPS3-209ENST00000486810 OBP2AQ9NY56 170 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 C9orf78Q9NZ63 289 aaPredicted RBP5.63□□□□□ -1.51
COPS3-209ENST00000486810 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.63□□□□□ -1.51
COPS3-209ENST00000486810 ZNF624Q9P2J8 865 aaPredicted RBP5.63□□□□□ -1.51
COPS3-209ENST00000486810 CLEC4AQ9UMR7 237 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 DNAJC16Q9Y2G8 782 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 MTF2Q9Y483 593 aaPredicted RBP5.63□□□□□ -1.51
COPS3-209ENST00000486810 PLEKHM1Q9Y4G2 1056 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 RAD54BQ9Y620 910 aa5.63□□□□□ -1.51
COPS3-209ENST00000486810 PLEKHH2Q8IVE3 1493 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms