RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 CHD5Q8TDI0 1954 aa13□□□□□ -0.33
HDAC6-229ENST00000486665 ZSCAN5CA6NGD5 496 aaPredicted RBP13□□□□□ -0.33
HDAC6-229ENST00000486665 MAN2B1O00754 1011 aa13□□□□□ -0.33
HDAC6-229ENST00000486665 KCNN4O15554 427 aa13□□□□□ -0.33
HDAC6-229ENST00000486665 ZNF821O75541 412 aaPredicted RBP13□□□□□ -0.33
HDAC6-229ENST00000486665 ATP5BP06576 529 aaKnown RBP13□□□□□ -0.33
HDAC6-229ENST00000486665 ITGAVP06756 1048 aa13□□□□□ -0.33
HDAC6-229ENST00000486665 DLDP09622 509 aaKnown RBP13□□□□□ -0.33
HDAC6-229ENST00000486665 SRCP12931 536 aa13□□□□□ -0.33
HDAC6-229ENST00000486665 CCNB1P14635 433 aa13□□□□□ -0.33
HDAC6-229ENST00000486665 ETS1P14921 441 aa13□□□□□ -0.33
HDAC6-229ENST00000486665 DRD1P21728 446 aa13□□□□□ -0.33
HDAC6-229ENST00000486665 PTPN3P26045 913 aa13□□□□□ -0.33
HDAC6-229ENST00000486665 CHRNA3P32297 505 aa13□□□□□ -0.33
HDAC6-229ENST00000486665 PTGIRP43119 386 aa13□□□□□ -0.33
HDAC6-229ENST00000486665 SEC13P55735 322 aa13□□□□□ -0.33
HDAC6-229ENST00000486665 IFI35P80217 286 aaPredicted RBP13□□□□□ -0.33
HDAC6-229ENST00000486665 MRPS25P82663 173 aaKnown RBP13□□□□□ -0.33
HDAC6-229ENST00000486665 SULT2A1Q06520 285 aa13□□□□□ -0.33
HDAC6-229ENST00000486665 SLC20A2Q08357 652 aa13□□□□□ -0.33
HDAC6-229ENST00000486665 GRSF1Q12849 480 aaKnown RBP eCLIP13□□□□□ -0.33
HDAC6-229ENST00000486665 ZBTB17Q13105 803 aa13□□□□□ -0.33
HDAC6-229ENST00000486665 PUM1Q14671 1186 aaKnown RBP eCLIP13□□□□□ -0.33
HDAC6-229ENST00000486665 LBRQ14739 615 aaKnown RBP13□□□□□ -0.33
HDAC6-229ENST00000486665 EGFLAMQ63HQ2 1017 aa13□□□□□ -0.33
HDAC6-229ENST00000486665 TIGD7Q6NT04 549 aaPredicted RBP13□□□□□ -0.33
HDAC6-229ENST00000486665 RETSATQ6NUM9 610 aa13□□□□□ -0.33
HDAC6-229ENST00000486665 CCDC137Q6PK04 289 aaKnown RBP13□□□□□ -0.33
HDAC6-229ENST00000486665 ZNF852Q6ZMS4 543 aa13□□□□□ -0.33
HDAC6-229ENST00000486665 PGBD5Q8N414 524 aa13□□□□□ -0.33
HDAC6-229ENST00000486665 CNTD1Q8N815 330 aa13□□□□□ -0.33
HDAC6-229ENST00000486665 ATP11CQ8NB49 1132 aa13□□□□□ -0.33
HDAC6-229ENST00000486665 GLIS1Q8NBF1 620 aa13□□□□□ -0.33
HDAC6-229ENST00000486665 LRRN4CLQ8ND94 238 aa13□□□□□ -0.33
HDAC6-229ENST00000486665 ATL2Q8NHH9 583 aa13□□□□□ -0.33
HDAC6-229ENST00000486665 ZNF599Q96NL3 588 aa13□□□□□ -0.33
HDAC6-229ENST00000486665 ACOX2Q99424 681 aa13□□□□□ -0.33
HDAC6-229ENST00000486665 KRT12Q99456 494 aa13□□□□□ -0.33
HDAC6-229ENST00000486665 IL12RB2Q99665 862 aa13□□□□□ -0.33
HDAC6-229ENST00000486665 PARD6AQ9NPB6 346 aa13□□□□□ -0.33
HDAC6-229ENST00000486665 RBM22Q9NW64 420 aaKnown RBP eCLIP13□□□□□ -0.33
HDAC6-229ENST00000486665 NDRG2Q9UN36 371 aaKnown RBP13□□□□□ -0.33
HDAC6-229ENST00000486665 SMG5Q9UPR3 1016 aaKnown RBP13□□□□□ -0.33
HDAC6-229ENST00000486665 FCF1Q9Y324 198 aaKnown RBP13□□□□□ -0.33
HDAC6-229ENST00000486665 PCDHGA2Q9Y5H1 932 aa13□□□□□ -0.33
HDAC6-229ENST00000486665 TTC34A8MYJ7 566 aa12.99□□□□□ -0.33
HDAC6-229ENST00000486665 WASH3PC4AMC7 463 aa12.99□□□□□ -0.33
HDAC6-229ENST00000486665 CCDC188H7C350 402 aa12.99□□□□□ -0.33
HDAC6-229ENST00000486665 RNF103O00237 685 aa12.99□□□□□ -0.33
HDAC6-229ENST00000486665 MUSKO15146 869 aa12.99□□□□□ -0.33
HDAC6-229ENST00000486665 TMCC1O94876 653 aa12.99□□□□□ -0.33
HDAC6-229ENST00000486665 ASLP04424 464 aa12.99□□□□□ -0.33
HDAC6-229ENST00000486665 SRPRAP08240 638 aaKnown RBP12.99□□□□□ -0.33
HDAC6-229ENST00000486665 ZSCAN5DPP0CG00 497 aa12.99□□□□□ -0.33
HDAC6-229ENST00000486665 KIR2DL1P43626 348 aaPredicted RBP12.99□□□□□ -0.33
HDAC6-229ENST00000486665 RPS9P46781 194 aaKnown RBP12.99□□□□□ -0.33
HDAC6-229ENST00000486665 FNTAP49354 379 aa12.99□□□□□ -0.33
HDAC6-229ENST00000486665 SERPINH1P50454 418 aaKnown RBP12.99□□□□□ -0.33
HDAC6-229ENST00000486665 RENBPP51606 427 aa12.99□□□□□ -0.33
HDAC6-229ENST00000486665 HNRNPDQ14103 355 aaKnown RBP12.99□□□□□ -0.33
HDAC6-229ENST00000486665 EIF4HQ15056 248 aaKnown RBP12.99□□□□□ -0.33
HDAC6-229ENST00000486665 TEX44Q53QW1 395 aa12.99□□□□□ -0.33
HDAC6-229ENST00000486665 INO80DQ53TQ3 878 aaPredicted RBP12.99□□□□□ -0.33
HDAC6-229ENST00000486665 DGKKQ5KSL6 1271 aa12.99□□□□□ -0.33
HDAC6-229ENST00000486665 TMCO4Q5TGY1 634 aa12.99□□□□□ -0.33
HDAC6-229ENST00000486665 MARC1Q5VT66 337 aa12.99□□□□□ -0.33
HDAC6-229ENST00000486665 HEATR6Q6AI08 1181 aaKnown RBP12.99□□□□□ -0.33
HDAC6-229ENST00000486665 ZNF567Q8N184 647 aa12.99□□□□□ -0.33
HDAC6-229ENST00000486665 SH2D3CQ8N5H7 860 aa12.99□□□□□ -0.33
HDAC6-229ENST00000486665 ALLCQ8N6M5 410 aa12.99□□□□□ -0.33
HDAC6-229ENST00000486665 FRS2Q8WU20 508 aa12.99□□□□□ -0.33
HDAC6-229ENST00000486665 EXOC4Q96A65 974 aa12.99□□□□□ -0.33
HDAC6-229ENST00000486665 AGAP3Q96P47 875 aa12.99□□□□□ -0.33
HDAC6-229ENST00000486665 EPC1Q9H2F5 836 aa12.99□□□□□ -0.33
HDAC6-229ENST00000486665 MTG2Q9H4K7 406 aa12.99□□□□□ -0.33
HDAC6-229ENST00000486665 ZSCAN32Q9NX65 697 aa12.99□□□□□ -0.33
HDAC6-229ENST00000486665 THAP10Q9P2Z0 257 aaPredicted RBP12.99□□□□□ -0.33
HDAC6-229ENST00000486665 NCDNQ9UBB6 729 aa12.99□□□□□ -0.33
HDAC6-229ENST00000486665 SLC25A13Q9UJS0 675 aa12.99□□□□□ -0.33
HDAC6-229ENST00000486665 PLA2G4CQ9UP65 541 aa12.99□□□□□ -0.33
HDAC6-229ENST00000486665 HS3ST2Q9Y278 367 aa12.99□□□□□ -0.33
HDAC6-229ENST00000486665 KIAA1549LQ6ZVL6 1849 aa12.99□□□□□ -0.33
HDAC6-229ENST00000486665 TPRP12270 2363 aaKnown RBP12.99□□□□□ -0.33
HDAC6-229ENST00000486665 CXorf51AA0A1B0GTR3 108 aa12.98□□□□□ -0.33
HDAC6-229ENST00000486665 TTC24A2A3L6 582 aaPredicted RBP12.98□□□□□ -0.33
HDAC6-229ENST00000486665 C5orf60A6NFR6 353 aa12.98□□□□□ -0.33
HDAC6-229ENST00000486665 SGK1O00141 431 aa12.98□□□□□ -0.33
HDAC6-229ENST00000486665 ZBTB24O43167 697 aaPredicted RBP12.98□□□□□ -0.33
HDAC6-229ENST00000486665 ATP9BO43861 1147 aa12.98□□□□□ -0.33
HDAC6-229ENST00000486665 GJB3O75712 270 aa12.98□□□□□ -0.33
HDAC6-229ENST00000486665 HLA-DQB2P05538 268 aa12.98□□□□□ -0.33
HDAC6-229ENST00000486665 CHRNB1P11230 501 aa12.98□□□□□ -0.33
HDAC6-229ENST00000486665 HNRNPLP14866 589 aaKnown RBP eCLIP12.98□□□□□ -0.33
HDAC6-229ENST00000486665 STIP1P31948 543 aaKnown RBP12.98□□□□□ -0.33
HDAC6-229ENST00000486665 CD68P34810 354 aaPredicted RBP12.98□□□□□ -0.33
HDAC6-229ENST00000486665 TIE1P35590 1138 aa12.98□□□□□ -0.33
HDAC6-229ENST00000486665 IL12RB1P42701 662 aa12.98□□□□□ -0.33
HDAC6-229ENST00000486665 WASP42768 502 aa12.98□□□□□ -0.33
HDAC6-229ENST00000486665 MMP13P45452 471 aa12.98□□□□□ -0.33
HDAC6-229ENST00000486665 RGRP47804 291 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms