RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 NADSYN1Q6IA69 706 aa20.65■□□□□ 0.9
HPS3-206ENST00000486530 KIAA1841Q6NSI8 718 aa20.65■□□□□ 0.9
HPS3-206ENST00000486530 PABPC5Q96DU9 382 aaKnown RBP20.65■□□□□ 0.9
HPS3-206ENST00000486530 ZNF778Q96MU6 729 aa20.65■□□□□ 0.9
HPS3-206ENST00000486530 VN1R3Q9BXE9 311 aa20.65■□□□□ 0.9
HPS3-206ENST00000486530 HSFX1Q9UBD0 423 aa20.65■□□□□ 0.9
HPS3-206ENST00000486530 AFF4Q9UHB7 1163 aaKnown RBP20.65■□□□□ 0.9
HPS3-206ENST00000486530 F5H5T6 163 aa20.64■□□□□ 0.9
HPS3-206ENST00000486530 GSRP00390 522 aa20.64■□□□□ 0.9
HPS3-206ENST00000486530 RPL17P18621 184 aaKnown RBP20.64■□□□□ 0.9
HPS3-206ENST00000486530 IL10RBQ08334 325 aa20.64■□□□□ 0.9
HPS3-206ENST00000486530 CCDC153Q494R4 210 aa20.64■□□□□ 0.9
HPS3-206ENST00000486530 C16orf46Q6P387 395 aa20.64■□□□□ 0.9
HPS3-206ENST00000486530 CMC1Q7Z7K0 106 aa20.64■□□□□ 0.9
HPS3-206ENST00000486530 ZNF354CQ86Y25 554 aa20.64■□□□□ 0.9
HPS3-206ENST00000486530 CNTN4Q8IWV2 1026 aa20.64■□□□□ 0.9
HPS3-206ENST00000486530 PSMG2Q969U7 264 aa20.64■□□□□ 0.9
HPS3-206ENST00000486530 AZIN2Q96A70 460 aa20.64■□□□□ 0.9
HPS3-206ENST00000486530 KLHL29Q96CT2 875 aa20.64■□□□□ 0.9
HPS3-206ENST00000486530 ATXN7L3BQ96GX2 97 aa20.64■□□□□ 0.9
HPS3-206ENST00000486530 VPS39Q96JC1 886 aa20.64■□□□□ 0.9
HPS3-206ENST00000486530 TMEM120AQ9BXJ8 343 aa20.64■□□□□ 0.9
HPS3-206ENST00000486530 PRKD2Q9BZL6 878 aa20.64■□□□□ 0.9
HPS3-206ENST00000486530 KCNK13Q9HB14 408 aa20.64■□□□□ 0.9
HPS3-206ENST00000486530 ARNT2Q9HBZ2 717 aa20.64■□□□□ 0.9
HPS3-206ENST00000486530 ZFP69BQ9UJL9 534 aa20.64■□□□□ 0.9
HPS3-206ENST00000486530 KIAA0355O15063 1070 aa20.64■□□□□ 0.89
HPS3-206ENST00000486530 PROCP04070 461 aa20.64■□□□□ 0.89
HPS3-206ENST00000486530 PAMP19021 973 aa20.64■□□□□ 0.89
HPS3-206ENST00000486530 OR1E1P30953 314 aa20.64■□□□□ 0.89
HPS3-206ENST00000486530 CDK18Q07002 472 aa20.64■□□□□ 0.89
HPS3-206ENST00000486530 SLC10A7Q0GE19 358 aa20.64■□□□□ 0.89
HPS3-206ENST00000486530 STX3Q13277 289 aa20.64■□□□□ 0.89
HPS3-206ENST00000486530 SERINC3Q13530 473 aa20.64■□□□□ 0.89
HPS3-206ENST00000486530 UGP2Q16851 508 aa20.64■□□□□ 0.89
HPS3-206ENST00000486530 C5orf22Q49AR2 442 aa20.64■□□□□ 0.89
HPS3-206ENST00000486530 PPM1JQ5JR12 505 aa20.64■□□□□ 0.89
HPS3-206ENST00000486530 CYB5D1Q6P9G0 228 aa20.64■□□□□ 0.89
HPS3-206ENST00000486530 KLHDC10Q6PID8 442 aa20.64■□□□□ 0.89
HPS3-206ENST00000486530 ASRGL1Q7L266 308 aa20.64■□□□□ 0.89
HPS3-206ENST00000486530 PPP1R14CQ8TAE6 165 aa20.64■□□□□ 0.89
HPS3-206ENST00000486530 ZNF689Q96CS4 500 aaPredicted RBP20.64■□□□□ 0.89
HPS3-206ENST00000486530 ZNF512Q96ME7 567 aaPredicted RBP20.64■□□□□ 0.89
HPS3-206ENST00000486530 TMEM106CQ9BVX2 250 aa20.64■□□□□ 0.89
HPS3-206ENST00000486530 RHOJQ9H4E5 214 aa20.64■□□□□ 0.89
HPS3-206ENST00000486530 RETREG1Q9H6L5 497 aa20.64■□□□□ 0.89
HPS3-206ENST00000486530 ATP13A1Q9HD20 1204 aa20.64■□□□□ 0.89
HPS3-206ENST00000486530 CSF2RAP15509 400 aa20.63■□□□□ 0.89
HPS3-206ENST00000486530 NQO1P15559 274 aaKnown RBP20.63■□□□□ 0.89
HPS3-206ENST00000486530 IRX4P78413 519 aa20.63■□□□□ 0.89
HPS3-206ENST00000486530 MBLAC2Q68D91 279 aa20.63■□□□□ 0.89
HPS3-206ENST00000486530 CIR1Q86X95 450 aaPredicted RBP20.63■□□□□ 0.89
HPS3-206ENST00000486530 CRLF3Q8IUI8 442 aa20.63■□□□□ 0.89
HPS3-206ENST00000486530 KLHL5Q96PQ7 755 aa20.63■□□□□ 0.89
HPS3-206ENST00000486530 GPR22Q99680 433 aa20.63■□□□□ 0.89
HPS3-206ENST00000486530 NACA2Q9H009 215 aa20.63■□□□□ 0.89
HPS3-206ENST00000486530 KLC4Q9NSK0 619 aa20.63■□□□□ 0.89
HPS3-206ENST00000486530 THAP1Q9NVV9 213 aa20.63■□□□□ 0.89
HPS3-206ENST00000486530 CCDC78A2IDD5 438 aa20.62■□□□□ 0.89
HPS3-206ENST00000486530 ACSL4O60488 711 aa20.62■□□□□ 0.89
HPS3-206ENST00000486530 SOD2P04179 222 aa20.62■□□□□ 0.89
HPS3-206ENST00000486530 KCNQ1P51787 676 aa20.62■□□□□ 0.89
HPS3-206ENST00000486530 ITKQ08881 620 aa20.62■□□□□ 0.89
HPS3-206ENST00000486530 PCLAFQ15004 111 aa20.62■□□□□ 0.89
HPS3-206ENST00000486530 PCSK7Q16549 785 aa20.62■□□□□ 0.89
HPS3-206ENST00000486530 CES4AQ5XG92 561 aa20.62■□□□□ 0.89
HPS3-206ENST00000486530 KIAA0930Q6ICG6 404 aaPredicted RBP20.62■□□□□ 0.89
HPS3-206ENST00000486530 NECAB2Q7Z6G3 386 aa20.62■□□□□ 0.89
HPS3-206ENST00000486530 TBC1D1Q86TI0 1168 aaPredicted RBP20.62■□□□□ 0.89
HPS3-206ENST00000486530 MTDHQ86UE4 582 aaKnown RBP20.62■□□□□ 0.89
HPS3-206ENST00000486530 TREX1Q9NSU2 369 aa20.62■□□□□ 0.89
HPS3-206ENST00000486530 KCNK4Q9NYG8 393 aa20.62■□□□□ 0.89
HPS3-206ENST00000486530 TMEM216Q9P0N5 145 aa20.62■□□□□ 0.89
HPS3-206ENST00000486530 A0A096LPK6 155 aa20.62■□□□□ 0.89
HPS3-206ENST00000486530 ZNF840PA6NDX5 716 aa20.62■□□□□ 0.89
HPS3-206ENST00000486530 GOLGA8TH3BQL2 631 aa20.62■□□□□ 0.89
HPS3-206ENST00000486530 DNAJC6O75061 913 aa20.62■□□□□ 0.89
HPS3-206ENST00000486530 SIN3BO75182 1162 aa20.62■□□□□ 0.89
HPS3-206ENST00000486530 PRKCGP05129 697 aa20.62■□□□□ 0.89
HPS3-206ENST00000486530 CD86P42081 329 aa20.62■□□□□ 0.89
HPS3-206ENST00000486530 ARCN1P48444 511 aaKnown RBP20.62■□□□□ 0.89
HPS3-206ENST00000486530 HARS2P49590 506 aaKnown RBP20.62■□□□□ 0.89
HPS3-206ENST00000486530 DEFB103AP81534 67 aa20.62■□□□□ 0.89
HPS3-206ENST00000486530 TAF1BQ53T94 588 aaPredicted RBP20.62■□□□□ 0.89
HPS3-206ENST00000486530 HECTD3Q5T447 861 aa20.62■□□□□ 0.89
HPS3-206ENST00000486530 TPGS2Q68CL5 300 aa20.62■□□□□ 0.89
HPS3-206ENST00000486530 ESRP1Q6NXG1 681 aaKnown RBP20.62■□□□□ 0.89
HPS3-206ENST00000486530 TMCO2Q7Z6W1 182 aaPredicted RBP20.62■□□□□ 0.89
HPS3-206ENST00000486530 CLEC14AQ86T13 490 aa20.62■□□□□ 0.89
HPS3-206ENST00000486530 ZC3HC1Q86WB0 502 aaKnown RBP20.62■□□□□ 0.89
HPS3-206ENST00000486530 LGI2Q8N0V4 545 aa20.62■□□□□ 0.89
HPS3-206ENST00000486530 ZNF461Q8TAF7 563 aa20.62■□□□□ 0.89
HPS3-206ENST00000486530 RANBP9Q96S59 729 aa20.62■□□□□ 0.89
HPS3-206ENST00000486530 CLSTN3Q9BQT9 956 aa20.62■□□□□ 0.89
HPS3-206ENST00000486530 ARHGEF3Q9NR81 526 aa20.62■□□□□ 0.89
HPS3-206ENST00000486530 HEATR9A2RTY3 570 aa20.61■□□□□ 0.89
HPS3-206ENST00000486530 ABLIM3O94929 683 aa20.61■□□□□ 0.89
HPS3-206ENST00000486530 VAPBO95292 243 aa20.61■□□□□ 0.89
HPS3-206ENST00000486530 FGF3P11487 239 aaPredicted RBP20.61■□□□□ 0.89
HPS3-206ENST00000486530 SLC11A2P49281 568 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms