RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 PMLP29590 882 aa17.98■□□□□ 0.47
COL6A1-204ENST00000486023 CASP14P31944 242 aa17.98■□□□□ 0.47
COL6A1-204ENST00000486023 TAS2R38P59533 333 aa17.98■□□□□ 0.47
COL6A1-204ENST00000486023 ZBED6P86452 979 aa17.98■□□□□ 0.47
COL6A1-204ENST00000486023 CCDC15Q0P6D6 951 aa17.98■□□□□ 0.47
COL6A1-204ENST00000486023 STAT4Q14765 748 aa17.98■□□□□ 0.47
COL6A1-204ENST00000486023 SUZ12Q15022 739 aaKnown RBP17.98■□□□□ 0.47
COL6A1-204ENST00000486023 SLC45A4Q5BKX6 768 aa17.98■□□□□ 0.47
COL6A1-204ENST00000486023 PPP6R3Q5H9R7 873 aaPredicted RBP17.98■□□□□ 0.47
COL6A1-204ENST00000486023 ATXN7L2Q5T6C5 722 aaPredicted RBP17.98■□□□□ 0.47
COL6A1-204ENST00000486023 ERMARDQ5T6L9 678 aa17.98■□□□□ 0.47
COL6A1-204ENST00000486023 PIP5KL1Q5T9C9 394 aa17.98■□□□□ 0.47
COL6A1-204ENST00000486023 ERN2Q76MJ5 926 aaKnown RBP17.98■□□□□ 0.47
COL6A1-204ENST00000486023 ARFGAP1Q8N6T3 406 aa17.98■□□□□ 0.47
COL6A1-204ENST00000486023 TRIM11Q96F44 468 aa17.98■□□□□ 0.47
COL6A1-204ENST00000486023 HMCESQ96FZ2 354 aa17.98■□□□□ 0.47
COL6A1-204ENST00000486023 PPP1R16AQ96I34 528 aa17.98■□□□□ 0.47
COL6A1-204ENST00000486023 KLC2Q9H0B6 622 aa17.98■□□□□ 0.47
COL6A1-204ENST00000486023 KDM4CQ9H3R0 1056 aa17.98■□□□□ 0.47
COL6A1-204ENST00000486023 RETREG1Q9H6L5 497 aa17.98■□□□□ 0.47
COL6A1-204ENST00000486023 MRPL47Q9HD33 250 aaKnown RBP17.98■□□□□ 0.47
COL6A1-204ENST00000486023 BZW2Q9Y6E2 419 aaKnown RBP17.98■□□□□ 0.47
COL6A1-204ENST00000486023 SCINQ9Y6U3 715 aa17.98■□□□□ 0.47
COL6A1-204ENST00000486023 WASF2Q9Y6W5 498 aa17.98■□□□□ 0.47
COL6A1-204ENST00000486023 PCDH15Q96QU1 1955 aa17.97■□□□□ 0.47
COL6A1-204ENST00000486023 ASCC3Q8N3C0 2202 aaKnown RBP17.97■□□□□ 0.47
COL6A1-204ENST00000486023 EEF2KO00418 725 aaKnown RBP17.97■□□□□ 0.47
COL6A1-204ENST00000486023 VILLO15195 856 aa17.97■□□□□ 0.47
COL6A1-204ENST00000486023 TPM3P06753 285 aa17.97■□□□□ 0.47
COL6A1-204ENST00000486023 MYBL1P10243 752 aa17.97■□□□□ 0.47
COL6A1-204ENST00000486023 MIPP30301 263 aa17.97■□□□□ 0.47
COL6A1-204ENST00000486023 CTSKP43235 329 aa17.97■□□□□ 0.47
COL6A1-204ENST00000486023 AIF1P55008 147 aa17.97■□□□□ 0.47
COL6A1-204ENST00000486023 GEMIN4P57678 1058 aaKnown RBP17.97■□□□□ 0.47
COL6A1-204ENST00000486023 MAPK8IP2Q13387 824 aaPredicted RBP17.97■□□□□ 0.47
COL6A1-204ENST00000486023 CCDC157Q569K6 752 aa17.97■□□□□ 0.47
COL6A1-204ENST00000486023 HGSNATQ68CP4 663 aa17.97■□□□□ 0.47
COL6A1-204ENST00000486023 FBXL19Q6PCT2 694 aa17.97■□□□□ 0.47
COL6A1-204ENST00000486023 PEBP4Q96S96 227 aa17.97■□□□□ 0.47
COL6A1-204ENST00000486023 KCTD15Q96SI1 283 aaPredicted RBP17.97■□□□□ 0.47
COL6A1-204ENST00000486023 SNRNP25Q9BV90 132 aaKnown RBP17.97■□□□□ 0.47
COL6A1-204ENST00000486023 ISCUQ9H1K1 167 aa17.97■□□□□ 0.47
COL6A1-204ENST00000486023 TSPY26PQ9H489 355 aa17.97■□□□□ 0.47
COL6A1-204ENST00000486023 NOL6Q9H6R4 1146 aaKnown RBP17.97■□□□□ 0.47
COL6A1-204ENST00000486023 ZWILCHQ9H900 591 aa17.97■□□□□ 0.47
COL6A1-204ENST00000486023 ARHGAP20Q9P2F6 1191 aa17.97■□□□□ 0.47
COL6A1-204ENST00000486023 TLR4O00206 839 aa17.96■□□□□ 0.47
COL6A1-204ENST00000486023 GYPCP04921 128 aa17.96■□□□□ 0.47
COL6A1-204ENST00000486023 SSR1P43307 286 aaKnown RBP17.96■□□□□ 0.47
COL6A1-204ENST00000486023 CCT8P50990 548 aa17.96■□□□□ 0.47
COL6A1-204ENST00000486023 SNRPD1P62314 119 aaKnown RBP17.96■□□□□ 0.47
COL6A1-204ENST00000486023 SETMARQ53H47 684 aaPredicted RBP17.96■□□□□ 0.47
COL6A1-204ENST00000486023 CCDC122Q5T0U0 273 aa17.96■□□□□ 0.47
COL6A1-204ENST00000486023 NAPEPLDQ6IQ20 393 aa17.96■□□□□ 0.47
COL6A1-204ENST00000486023 GATAD2AQ86YP4 633 aa17.96■□□□□ 0.47
COL6A1-204ENST00000486023 PNPLA1Q8N8W4 532 aa17.96■□□□□ 0.47
COL6A1-204ENST00000486023 HSPH1Q92598 858 aa17.96■□□□□ 0.47
COL6A1-204ENST00000486023 BTBD6Q96KE9 485 aa17.96■□□□□ 0.47
COL6A1-204ENST00000486023 THAP2Q9H0W7 228 aa17.96■□□□□ 0.47
COL6A1-204ENST00000486023 PREBQ9HCU5 417 aa17.96■□□□□ 0.47
COL6A1-204ENST00000486023 FZD3Q9NPG1 666 aa17.96■□□□□ 0.47
COL6A1-204ENST00000486023 GDF3Q9NR23 364 aa17.96■□□□□ 0.47
COL6A1-204ENST00000486023 A0A087X0T9 212 aa17.95■□□□□ 0.46
COL6A1-204ENST00000486023 NEMP1O14524 444 aa17.95■□□□□ 0.46
COL6A1-204ENST00000486023 FGF10O15520 208 aaPredicted RBP17.95■□□□□ 0.46
COL6A1-204ENST00000486023 LATO43561 262 aa17.95■□□□□ 0.46
COL6A1-204ENST00000486023 HYAL3O43820 417 aaPredicted RBP17.95■□□□□ 0.46
COL6A1-204ENST00000486023 TMCC1O94876 653 aa17.95■□□□□ 0.46
COL6A1-204ENST00000486023 UGT2B4P06133 528 aa17.95■□□□□ 0.46
COL6A1-204ENST00000486023 FAM228BP0C875 321 aa17.95■□□□□ 0.46
COL6A1-204ENST00000486023 NEK3P51956 506 aa17.95■□□□□ 0.46
COL6A1-204ENST00000486023 YBEYP58557 167 aaPredicted RBP17.95■□□□□ 0.46
COL6A1-204ENST00000486023 RHOAP61586 193 aa17.95■□□□□ 0.46
COL6A1-204ENST00000486023 SMTNL2Q2TAL5 461 aa17.95■□□□□ 0.46
COL6A1-204ENST00000486023 MYLK3Q32MK0 819 aa17.95■□□□□ 0.46
COL6A1-204ENST00000486023 SEL1L3Q68CR1 1132 aa17.95■□□□□ 0.46
COL6A1-204ENST00000486023 OR2AP1Q8NGE2 309 aa17.95■□□□□ 0.46
COL6A1-204ENST00000486023 SYN2Q92777 582 aaPredicted RBP17.95■□□□□ 0.46
COL6A1-204ENST00000486023 EXOC2Q96KP1 924 aa17.95■□□□□ 0.46
COL6A1-204ENST00000486023 KLHL32Q96NJ5 620 aa17.95■□□□□ 0.46
COL6A1-204ENST00000486023 HDAC8Q9BY41 377 aa17.95■□□□□ 0.46
COL6A1-204ENST00000486023 PCOLCE2Q9UKZ9 415 aa17.95■□□□□ 0.46
COL6A1-204ENST00000486023 BTBD3Q9Y2F9 522 aa17.95■□□□□ 0.46
COL6A1-204ENST00000486023 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.95■□□□□ 0.46
COL6A1-204ENST00000486023 A0A1W2PR77 199 aa17.94■□□□□ 0.46
COL6A1-204ENST00000486023 ZSCAN5CA6NGD5 496 aaPredicted RBP17.94■□□□□ 0.46
COL6A1-204ENST00000486023 J3KR12 359 aa17.94■□□□□ 0.46
COL6A1-204ENST00000486023 DFFAO00273 331 aa17.94■□□□□ 0.46
COL6A1-204ENST00000486023 CBFA2T2O43439 604 aa17.94■□□□□ 0.46
COL6A1-204ENST00000486023 LRCH4O75427 683 aa17.94■□□□□ 0.46
COL6A1-204ENST00000486023 POP4O95707 220 aaKnown RBP17.94■□□□□ 0.46
COL6A1-204ENST00000486023 ZNF883P0CG24 379 aa17.94■□□□□ 0.46
COL6A1-204ENST00000486023 ADRB3P13945 408 aa17.94■□□□□ 0.46
COL6A1-204ENST00000486023 SERINC3Q13530 473 aa17.94■□□□□ 0.46
COL6A1-204ENST00000486023 HNRNPDQ14103 355 aaKnown RBP17.94■□□□□ 0.46
COL6A1-204ENST00000486023 ZNF423Q2M1K9 1284 aa17.94■□□□□ 0.46
COL6A1-204ENST00000486023 PARP15Q460N3 678 aa17.94■□□□□ 0.46
COL6A1-204ENST00000486023 LRRC73Q5JTD7 316 aa17.94■□□□□ 0.46
COL6A1-204ENST00000486023 PARS2Q7L3T8 475 aaKnown RBP17.94■□□□□ 0.46
COL6A1-204ENST00000486023 TRIM69Q86WT6 500 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms