RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, human

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-215	ENST00000485550	MTA1	Q13330	715 aa		10.82	□□□□□ -0.68
HMGN1-215	ENST00000485550	STAT4	Q14765	748 aa		10.82	□□□□□ -0.68
HMGN1-215	ENST00000485550	SLC25A52	Q3SY17	297 aa		10.82	□□□□□ -0.68
HMGN1-215	ENST00000485550	C5orf22	Q49AR2	442 aa		10.82	□□□□□ -0.68
HMGN1-215	ENST00000485550	RAB6C	Q53S08	254 aa		10.82	□□□□□ -0.68
HMGN1-215	ENST00000485550	SLC45A4	Q5BKX6	768 aa		10.82	□□□□□ -0.68
HMGN1-215	ENST00000485550	TCP11X2	Q5H9J9	407 aa		10.82	□□□□□ -0.68
HMGN1-215	ENST00000485550	BRMS1L	Q5PSV4	323 aa		10.82	□□□□□ -0.68
HMGN1-215	ENST00000485550	AGBL4	Q5VU57	503 aa		10.82	□□□□□ -0.68
HMGN1-215	ENST00000485550	NAA35	Q5VZE5	725 aa		10.82	□□□□□ -0.68
HMGN1-215	ENST00000485550	NAPEPLD	Q6IQ20	393 aa		10.82	□□□□□ -0.68
HMGN1-215	ENST00000485550	TRNP1	Q6NT89	227 aa		10.82	□□□□□ -0.68
HMGN1-215	ENST00000485550	LRRC31	Q6UY01	552 aa		10.82	□□□□□ -0.68
HMGN1-215	ENST00000485550	PRICKLE2	Q7Z3G6	844 aa		10.82	□□□□□ -0.68
HMGN1-215	ENST00000485550	FAM131B	Q86XD5	332 aa		10.82	□□□□□ -0.68
HMGN1-215	ENST00000485550	SPATS2	Q86XZ4	545 aa	Known RBP	10.82	□□□□□ -0.68
HMGN1-215	ENST00000485550	ZNF683	Q8IZ20	524 aa		10.82	□□□□□ -0.68
HMGN1-215	ENST00000485550	EMC1	Q8N766	993 aa		10.82	□□□□□ -0.68
HMGN1-215	ENST00000485550	DCBLD1	Q8N8Z6	715 aa		10.82	□□□□□ -0.68
HMGN1-215	ENST00000485550	CHST14	Q8NCH0	376 aa		10.82	□□□□□ -0.68
HMGN1-215	ENST00000485550	OR7D4	Q8NG98	312 aa		10.82	□□□□□ -0.68
HMGN1-215	ENST00000485550	RFFL	Q8WZ73	363 aa		10.82	□□□□□ -0.68
HMGN1-215	ENST00000485550	NT5C3B	Q969T7	300 aa		10.82	□□□□□ -0.68
HMGN1-215	ENST00000485550	CFAP57	Q96MR6	1250 aa		10.82	□□□□□ -0.68
HMGN1-215	ENST00000485550	MYOC	Q99972	504 aa		10.82	□□□□□ -0.68
HMGN1-215	ENST00000485550	SPON2	Q9BUD6	331 aa		10.82	□□□□□ -0.68
HMGN1-215	ENST00000485550	NAA15	Q9BXJ9	866 aa	Known RBP	10.82	□□□□□ -0.68
HMGN1-215	ENST00000485550	STK33	Q9BYT3	514 aa		10.82	□□□□□ -0.68
HMGN1-215	ENST00000485550	RAB6C	Q9H0N0	254 aa		10.82	□□□□□ -0.68
HMGN1-215	ENST00000485550	TNKS2	Q9H2K2	1166 aa		10.82	□□□□□ -0.68
HMGN1-215	ENST00000485550	VPS51	Q9UID3	782 aa		10.82	□□□□□ -0.68
HMGN1-215	ENST00000485550	COL27A1	Q8IZC6	1860 aa	Predicted RBP	10.82	□□□□□ -0.68
HMGN1-215	ENST00000485550	SLC31A1	O15431	190 aa		10.81	□□□□□ -0.68
HMGN1-215	ENST00000485550	YKT6	O15498	198 aa		10.81	□□□□□ -0.68
HMGN1-215	ENST00000485550	KLK10	O43240	276 aa		10.81	□□□□□ -0.68
HMGN1-215	ENST00000485550	LAT	O43561	262 aa		10.81	□□□□□ -0.68
HMGN1-215	ENST00000485550	PLRG1	O43660	514 aa	Known RBP	10.81	□□□□□ -0.68
HMGN1-215	ENST00000485550	SDC3	O75056	442 aa		10.81	□□□□□ -0.68
HMGN1-215	ENST00000485550	GFPT2	O94808	682 aa		10.81	□□□□□ -0.68
HMGN1-215	ENST00000485550	GJB6	O95452	261 aa		10.81	□□□□□ -0.68
HMGN1-215	ENST00000485550	OR1E1	P30953	314 aa		10.81	□□□□□ -0.68
HMGN1-215	ENST00000485550	CHRNA3	P32297	505 aa		10.81	□□□□□ -0.68
HMGN1-215	ENST00000485550	DNA2	P51530	1060 aa		10.81	□□□□□ -0.68
HMGN1-215	ENST00000485550	UCN	P55089	124 aa		10.81	□□□□□ -0.68
HMGN1-215	ENST00000485550	GABRE	P78334	506 aa		10.81	□□□□□ -0.68
HMGN1-215	ENST00000485550	ATP11A	P98196	1134 aa		10.81	□□□□□ -0.68
HMGN1-215	ENST00000485550	SRSF1	Q07955	248 aa	Known RBP eCLIP	10.81	□□□□□ -0.68
HMGN1-215	ENST00000485550	VAC14	Q08AM6	782 aa		10.81	□□□□□ -0.68
HMGN1-215	ENST00000485550	ILK	Q13418	452 aa		10.81	□□□□□ -0.68
HMGN1-215	ENST00000485550	SFMBT2	Q5VUG0	894 aa		10.81	□□□□□ -0.68
HMGN1-215	ENST00000485550	KIAA1614	Q5VZ46	1190 aa		10.81	□□□□□ -0.68
HMGN1-215	ENST00000485550	CACTIN-AS1	Q8N1I8	211 aa		10.81	□□□□□ -0.68
HMGN1-215	ENST00000485550	OR2A12	Q8NGT7	310 aa		10.81	□□□□□ -0.68
HMGN1-215	ENST00000485550	GRIN3A	Q8TCU5	1115 aa		10.81	□□□□□ -0.68
HMGN1-215	ENST00000485550	SLC20A1	Q8WUM9	679 aa		10.81	□□□□□ -0.68
HMGN1-215	ENST00000485550	KCNE4	Q8WWG9	221 aa		10.81	□□□□□ -0.68
HMGN1-215	ENST00000485550	ARRDC3	Q96B67	414 aa		10.81	□□□□□ -0.68
HMGN1-215	ENST00000485550	PGAP3	Q96FM1	320 aa	Predicted RBP	10.81	□□□□□ -0.68
HMGN1-215	ENST00000485550	MED8	Q96G25	268 aa		10.81	□□□□□ -0.68
HMGN1-215	ENST00000485550	HIC2	Q96JB3	615 aa		10.81	□□□□□ -0.68
HMGN1-215	ENST00000485550	ZNF578	Q96N58	590 aa	Predicted RBP	10.81	□□□□□ -0.68
HMGN1-215	ENST00000485550	C2orf49	Q9BVC5	232 aa	Predicted RBP	10.81	□□□□□ -0.68
HMGN1-215	ENST00000485550	FZD3	Q9NPG1	666 aa		10.81	□□□□□ -0.68
HMGN1-215	ENST00000485550	NLRC4	Q9NPP4	1024 aa		10.81	□□□□□ -0.68
HMGN1-215	ENST00000485550	METTL5	Q9NRN9	209 aa	Known RBP	10.81	□□□□□ -0.68
HMGN1-215	ENST00000485550	TMEM59L	Q9UK28	342 aa		10.81	□□□□□ -0.68
HMGN1-215	ENST00000485550	HS3ST2	Q9Y278	367 aa		10.81	□□□□□ -0.68
HMGN1-215	ENST00000485550	ACTL7A	Q9Y615	435 aa		10.81	□□□□□ -0.68
HMGN1-215	ENST00000485550		A0A1W2PQU0	124 aa		10.8	□□□□□ -0.68
HMGN1-215	ENST00000485550		F8VZ95	297 aa		10.8	□□□□□ -0.68
HMGN1-215	ENST00000485550	SLC7A4	O43246	635 aa		10.8	□□□□□ -0.68
HMGN1-215	ENST00000485550	RNGTT	O60942	597 aa	Known RBP	10.8	□□□□□ -0.68
HMGN1-215	ENST00000485550	PRLR	P16471	622 aa		10.8	□□□□□ -0.68
HMGN1-215	ENST00000485550	ACP1	P24666	158 aa		10.8	□□□□□ -0.68
HMGN1-215	ENST00000485550	EEF1G	P26641	437 aa	Known RBP	10.8	□□□□□ -0.68
HMGN1-215	ENST00000485550	TAS2R38	P59533	333 aa		10.8	□□□□□ -0.68
HMGN1-215	ENST00000485550	POLR2F	P61218	127 aa	Known RBP	10.8	□□□□□ -0.68
HMGN1-215	ENST00000485550	NOMO3	P69849	1222 aa		10.8	□□□□□ -0.68
HMGN1-215	ENST00000485550	DAB2	P98082	770 aa		10.8	□□□□□ -0.68
HMGN1-215	ENST00000485550	CDO1	Q16878	200 aa		10.8	□□□□□ -0.68
HMGN1-215	ENST00000485550	C15orf59	Q2T9L4	293 aa	Predicted RBP	10.8	□□□□□ -0.68
HMGN1-215	ENST00000485550	PIP5KL1	Q5T9C9	394 aa		10.8	□□□□□ -0.68
HMGN1-215	ENST00000485550	KANSL1	Q7Z3B3	1105 aa		10.8	□□□□□ -0.68
HMGN1-215	ENST00000485550	SETD3	Q86TU7	594 aa	Predicted RBP	10.8	□□□□□ -0.68
HMGN1-215	ENST00000485550	DRC7	Q8IY82	874 aa		10.8	□□□□□ -0.68
HMGN1-215	ENST00000485550	MFSD2A	Q8NA29	543 aa		10.8	□□□□□ -0.68
HMGN1-215	ENST00000485550	MSANTD4	Q8NCY6	345 aa		10.8	□□□□□ -0.68
HMGN1-215	ENST00000485550	SLC30A5	Q8TAD4	765 aa		10.8	□□□□□ -0.68
HMGN1-215	ENST00000485550	EPS8L1	Q8TE68	723 aa		10.8	□□□□□ -0.68
HMGN1-215	ENST00000485550	FAM131C	Q96AQ9	280 aa		10.8	□□□□□ -0.68
HMGN1-215	ENST00000485550	C1orf74	Q96LT6	269 aa		10.8	□□□□□ -0.68
HMGN1-215	ENST00000485550	MAGEB5	Q9BZ81	275 aa		10.8	□□□□□ -0.68
HMGN1-215	ENST00000485550	KDM4C	Q9H3R0	1056 aa		10.8	□□□□□ -0.68
HMGN1-215	ENST00000485550	CAAP1	Q9H8G2	361 aa		10.8	□□□□□ -0.68
HMGN1-215	ENST00000485550	FAM207A	Q9NSI2	230 aa	Predicted RBP	10.8	□□□□□ -0.68
HMGN1-215	ENST00000485550	PAXBP1	Q9Y5B6	917 aa		10.8	□□□□□ -0.68
HMGN1-215	ENST00000485550	TRPM6	Q9BX84	2022 aa		10.8	□□□□□ -0.68
HMGN1-215	ENST00000485550	PRAMEF26	H0Y7S4	382 aa		10.79	□□□□□ -0.68
HMGN1-215	ENST00000485550	TRIM38	O00635	465 aa		10.79	□□□□□ -0.68
HMGN1-215	ENST00000485550	EPHB6	O15197	1021 aa		10.79	□□□□□ -0.68

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